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1.
Mol Phylogenet Evol ; 199: 108164, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39084413

RESUMO

With 289 known species in 51 genera, the ophidiiform family Ophidiidae together with their relatives from the Carapidae (36 species in eight genera) of the same suborder Ophidioidei dominate the deep sea, but some occur also in shallow water habitats. Despite their high species diversity in the deep sea and wide bathymetric distributions, their phylogenetic relationships and evolution remain unexplored due in part to sampling difficulties. Thanks to the biodiversity exploratory program entitled "Tropical Deep-Sea Benthos" and joint efforts between Taiwan and French teams for sampling from different localities across the Indo-West Pacific over the last two decades, we are able to compile comprehensive datasets for investigations. In this study, 59 samples representing 36 of 59 known ophidioid genera are selected and used to construct a multi-gene dataset to infer the phylogenetic relationships of ophidioid fishes and their relatives. Our results reveal that the Ophidiidae forms a paraphyletic group with respect to the Carapidae. The four main clades of Ophidioidei resolved are the (1) clade comprising species from the subfamily Brotulinae; (2) clade that includes species in the genera Acanthonus and Xyelacyba; (3) clade grouping Hypopleuron caninum with species from the family Carapidae; and (4) clade containing the species in the subfamily Brotulotaenilinae, Neobythitinae (in part), and Ophidiinae. Accordingly, we suggest the following new revisions based on our results and proposed morphological diagnoses. The subfamily Brotulinae should be elevated to the family level. The genera Xyelacyba and probably Tauredophidium (unsampled in this study) should be included in the newly established family Acanthonidae with Acanthonus. The families Carapidae and Ophidiidae are re-defined. Our time-calibrated phylogenetic and ancestral depth reconstructions enable us to clarify the evolutionary history of ophidiiform fishes and infer past patterns of species distributions at different depths. While Ophidiiformes is inferred to have originated in shallow waters around 96.25 million years ago (Mya), the common ancestor to the Ophidioidei is inferred to have invaded the deep sea around 90.22 Mya, the dates coinciding with the global anoxic event of the OAE2. The observed bathymetric distribution patterns in Ophidioidei most likely point to the mesopelagic zone as the center of origin and diversification. This was followed by multiple events of depth transitions or range expansions towards either shallower waters or greater depth zones, which were likely triggered by past climate changes during the Paleogene-Neogene.


Assuntos
Filogenia , Animais , Enguias/genética , Enguias/classificação , Teorema de Bayes , Análise de Sequência de DNA , DNA Mitocondrial/genética , Evolução Biológica , Funções Verossimilhança
2.
J Fish Biol ; 105(1): 153-165, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38654442

RESUMO

This study describes Lipogenys hyalinumvelum, a new species of the genus Lipogenys found on the Portuguese coast on the northeastern Atlantic during a crustacean survey. Information on the classification history and known distribution of the genus Lipogenys is provided. Dichotomous keys to the genera of Notacanthidae and the species of Lipogenys, based on morphology, are provided. The specimens were analysed using both morphological and molecular methods, including DNA sequencing of the COI and 16S genes. The distinct genetic characteristics support the recognition of the present specimens as a new species. The hyaline color of the flap at the posterior edge of the operculum is a characteristic that differentiates L. hyalinumvelum from Lipogenys gillii and provides the etymology of the species name.


Assuntos
Enguias , Animais , Oceano Atlântico , Enguias/genética , Enguias/anatomia & histologia , Enguias/classificação , Filogenia , Portugal , Análise de Sequência de DNA , Masculino , Feminino , Complexo IV da Cadeia de Transporte de Elétrons/genética
3.
Mol Biol Rep ; 48(7): 5795-5801, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-34292472

RESUMO

BACKGROUND: Two deep-sea eels collected from the Western Pacific Ocean are described in this study. Based on their morphological characteristics, the two deep-sea eel specimens were assumed to belong to the cusk-eel family Ophidiidae and the cutthroat eel family Synaphobranchidae. METHODS AND RESULTS: To accurately identify the species of the deep-sea eel specimens, we sequenced the mitochondrial genes (cytochrome c oxidase subunit I [COI] and 16S ribosomal RNA [16S rRNA]). Through molecular phylogenetic analysis based on mtDNA COI and 16S rRNA gene sequences, these species clustered with the genera Bassozetus and Synaphobranchus, suggesting that the deep-sea eel specimens collected are two species from the genera Bassozetus and Synaphobranchus in the Western Pacific Ocean, respectively. CONCLUSIONS: This is the first study to report new records of the genera Bassozetus and Synaphobranchus from the Western Pacific Ocean based on COI and 16S rRNA genes.


Assuntos
Enguias/classificação , Enguias/genética , Complexo IV da Cadeia de Transporte de Elétrons/genética , RNA Ribossômico 16S/genética , Animais , Geografia , Sequenciamento de Nucleotídeos em Larga Escala , Oceano Pacífico , Fenótipo , Filogenia
4.
J Fish Biol ; 98(5): 1363-1370, 2021 May.
Artigo em Inglês | MEDLINE | ID: mdl-33416194

RESUMO

A new species of the genus Cirrhimuraena (Anguilliformes: Ophichthidae), Cirrhimuraena indica sp. nov., is described based on eight specimens collected from the Paradip (Odisha) and Petuaghat harbours (West Bengal) along the Bay of Bengal. The species is distinct in having the upper jaw fringed with 16-17 cirri before posterior nostril and 4-5 in between the anterior and posterior nostrils on the side; dorsal fin originates above the level of gill opening, predorsal length is 9.3-10.9 in total length; the head is relatively large, the length is 9.3-9.8 in total length; no infraorbital pores are observed between the nostrils; teeth are numerous, small, conical and in bands on each jaw; pores are present before the gill opening 10-11 and before anus 47-48; pectoral-fin length is 2.4-2.8 in head length; predorsal vertebrae are 8-10, pre-anal vertebrae 43-47 and total vertebrae 164-169. In the maximum likelihood tree analysis for COI gene, the new species belongs to the same clade as the other congener of Cirrhimuraena chinensis and is separated from the species morphologically and genetically.


Assuntos
Enguias/classificação , Distribuição Animal , Animais , Baías , Enguias/anatomia & histologia , Enguias/genética , Complexo IV da Cadeia de Transporte de Elétrons/genética , Brânquias/anatomia & histologia , Cabeça/anatomia & histologia , Índia , Especificidade da Espécie , Coluna Vertebral/anatomia & histologia
5.
J Fish Biol ; 97(5): 1462-1480, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32844437

RESUMO

Strophidon McClelland is a muraenid genus with characteristic appearance of a very elongated body, a large mouth cleft and anteriorly placed eyes. The nomenclature and taxonomic history of species within Strophidon are contentious and its members are easily misidentified. In the present study, species of the genus Strophidon are revised based on morphological and molecular data, and five species are considered valid, including S. dawydoffi Prokofiev, S. dorsalis (Seale), S. sathete (Hamilton), S. ui Tanaka and a new species, S. tetraporus. Strophidon tetraporus sp. nov. is described based on 15 specimens from Indonesia, the Philippines, Taiwan and Vietnam with the unique characteristic of the constant presence of the fourth infraorbital pore among species of Strophidon. The intraspecific variation of vertebral formula within S. dorsalis is discussed based on molecular data. Muraena macrurus Bleeker and Thyrsoidea longissima Kaup are synonyms of S. sathete that can be distinguished from the most similar congener S. ui by a longer tail, smaller eyes and more inner maxillary and inner dentary teeth. A key to identify species of Strophidon is provided. The distribution and maximum size of each species are also re-evaluated.


Assuntos
Enguias/classificação , Animais , Ásia , Enguias/anatomia & histologia , Enguias/genética , Variação Genética , Especificidade da Espécie
6.
J Fish Biol ; 94(4): 621-647, 2019 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-30762230

RESUMO

In August 2007, October 2008 and September-October 2010, 241 Tucker trawl and plankton net tows were conducted at the surface to depths of 1377 m at six locations in the northern and eastern Gulf of Mexico (GOM) to document leptocephalus diversity and determine how assemblage structure, larval size, abundance and isotopic signatures differ across the region and with depth. Overall, 2696 leptocephali representing 59 distinct taxa from 10 families were collected. Five families accounted for 96% of the total catch with Congridae and Ophichthidae being the most abundant. The top four most abundant species composed 59% of the total catch and included: Ariosoma balearicum, Paraconger caudilimbatus, Rhynchoconger flavus and Ophichthus gomesii. Four anguilliform species not previously documented in the GOM as adults or leptocephali were collected in this study, including Monopenchelys acuta, Quassiremus ascensionis, Saurenchelys stylura and one leptocephalus only known from its larval stage, Leptocephalus proboscideus. Leptocephalus catches were significantly greater at night than during the day. Catches at night were concentrated in the upper 200 m of the water column and significantly declined with increasing depth. Leptocephali abundances and assemblages were significantly different between sites on the upper continental slope (c. 500 m depth) and sites on the middle to lower continental slope (c. 1500-2300 m). Sites on the lower continental slope had a mixture of deep-sea demersal, bathypelagic and coastal species, whereas upper-slope sites contained several numerically dominant species (e.g., A. balearicum, P. caudilimbatus) that probably spawn over the continental shelf and upper slope of the GOM. Standard lengths of the four dominant species differed between sites and years, indicating heterochronic reproduction and potential larval source pools within and outside of the GOM. Stable-isotope analyses (δ13 C and δ15 N) conducted on 185 specimens from six families revealed that leptocephali had a wide range of isotopic values at the family and size-class levels. Species in the families Muraenidae, Congridae and Ophichthidae had similar δ15 N values compared with the broad range of δ15 N values seen in the deep-sea families Nemichthyidae, Nettastomatidae and Synaphobranchidae. Stable-isotope values were variably related to length, with δ15 N values being positively size correlated in ophichthids and δ13 C values being negatively size correlated in A. balearicum and P. caudilimbatus. Results suggest that leptocephali feed in various water depths and masses, and on different components of POM, which could lead to niche partitioning. Ecological aspects of these important members of the plankton community provide insight into larval connectivity in the GOM as well as the early life history of Anguilliformes.


Assuntos
Enguias/fisiologia , Migração Animal , Animais , Comportamento Animal , Enguias/classificação , Golfo do México , Isótopos/análise , Larva/classificação , Larva/fisiologia , Densidade Demográfica , Dinâmica Populacional , Reprodução
7.
J Fish Biol ; 91(2): 673-678, 2017 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-28703299

RESUMO

Morphological asymmetry is described in the heterenchelyid mud eel Pythonichthys cf. macrurus from inshore coastal waters of Guinea, West Africa. The intensity of asymmetry differs between two examined specimens, with the more extreme case exhibiting strong asymmetry in both external and internal features, including unilateral depigmentation, reductive degeneration and embedding of a blind-side eye, skewed jaws with reduced dentition and tooth loss. The extent and nature of asymmetry suggests that this individual probably lived primarily on its left lateral side, not unlike sinistral pleuronectiform flatfishes.


Assuntos
Enguias/classificação , Linguados/classificação , África Ocidental , Animais , Comportamento Animal , Enguias/anatomia & histologia , Linguados/anatomia & histologia , Guiné , Arcada Osseodentária/anatomia & histologia
8.
BMC Evol Biol ; 16(1): 159, 2016 Aug 11.
Artigo em Inglês | MEDLINE | ID: mdl-27514517

RESUMO

BACKGROUND: Living anguilliform eels represent a distinct clade of elongated teleostean fishes inhabiting a wide range of habitats. Locomotion of these fishes is highly influenced by the elongated body shape, the anatomy of the vertebral column, and the corresponding soft tissues represented by the musculotendinous system. Up to now, the evolution of axial elongation in eels has been inferred from living taxa only, whereas the reconstruction of evolutionary patterns and functional ecology in extinct eels still is scarce. Rare but excellently preserved fossil eels from the Late Cretaceous and Cenozoic were investigated here to gain a better understanding of locomotory system evolution in anguilliforms and, consequently, their habitat occupations in deep time. RESULTS: The number of vertebrae in correlation with the body length separates extinct and extant anguilliforms. Even if the phylogenetic signal cannot entirely be excluded, the analyses performed here reveal a continuous shortening of the vertebral column with a simultaneous increase in vertebral numbers in conjunction with short lateral tendons throughout the order. These anatomical changes contradict previous hypotheses based on extant eels solely. CONCLUSIONS: The body curvatures of extant anguilliforms are highly flexible and can be clearly distinguished from extinct species. Anatomical changes of the vertebral column and musculotendinous system through time and between extinct and extant anguilliforms correlate with changes of the body plan and swimming performance and reveal significant shifts in habitat adaptation and thus behaviour. Evolutionary changes in the skeletal system of eels established here also imply that environmental shifts were triggered by abiotic rather than biotic factors (e.g., K/P boundary mass extinction event).


Assuntos
Evolução Biológica , Enguias/anatomia & histologia , Enguias/fisiologia , Fósseis , Animais , Ecossistema , Enguias/classificação , Enguias/genética , Europa (Continente) , Filogenia , Coluna Vertebral/anatomia & histologia , Natação
9.
Genet Mol Res ; 15(2)2016 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-27323052

RESUMO

To study the phylogenetic relationships of the genus Gymnothorax (moray eels) distributed in South China Sea, polymerase chain reactions were performed, and the amplification products were sequenced by cloning into the PMD18T-vector (TaKaRa). The entire gene sequences encoding cytochrome b (1140 bp) for 16 Gymnothorax (G. flavimarginatus, G. meleagris, G. undulates, G. reticularis, G. reevesi, G. melanospilus, G. rueppeliae, G. javanicus, G. chilospilus, G. pseudothyrsoideus, G. fimbriatus, G. hepaticus, G. berndti, G. curostus, G. favagineus, and G. margaritophorus) were obtained. Four additional Gymnothorax sequences from GenBank were also included. The nucleotide composition, genetic distances, and base substitution saturation analysis were calculated using the MEGA 5.0 Software. Phylogenetic analysis was performed using maximum-parsimony, maximum-likelihood (ML), and neighbor-joining (NJ). The results were as follows: 1) base-substitution saturation analysis suggested that both in third codon positions, and the full-length cytochrome b data set, Ts are not saturated, but Tv substitutions may be saturated, 2) the genus Gymnothorax, native to the South China Sea, is divided into four distinct clades, with two clades in the NJ and ML trees, and 3) according to our experimental data, G. melanospilus (Bleeker, 1855) and G. favagineus (Bloch and Schneider, 1801) are the same species.


Assuntos
Citocromos b/genética , Enguias/genética , Filogenia , Animais , China , Códon/genética , DNA Mitocondrial/genética , Enguias/classificação
10.
J Fish Biol ; 89(4): 2203-2211, 2016 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-27511812

RESUMO

A single specimen of giant leptocephalus Thalassenchelys foliaceus Castle & Raju 1975 was caught in subtropical waters of the western North Pacific Ocean. Mitochondrial coI gene sequence divergence between T. foliaceus and Congriscus maldivensis (Norman 1939) was 0·64 ± 0·27% (mean ± s.e.), and the myomere and vertebral counts of these species were similar, indicating T. foliaceus is a junior synonym of C. maldivensis.


Assuntos
DNA Mitocondrial/genética , Enguias/classificação , Animais , Enguias/genética , Genes Mitocondriais , Oceano Pacífico , Filogenia
11.
BMC Evol Biol ; 15: 224, 2015 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-26472465

RESUMO

BACKGROUND: The lower Congo River (LCR) is a region of exceptional species diversity and endemism in the Congo basin, including numerous species of spiny eels (genus Mastacembelus). Four of these exhibit distinctive phenotypes characterized by greatly reduced optic globes deeply embedded into the head (cryptophthalmia) and reduced (or absent) melanin pigmentation, among other characteristics. A strikingly similar cryptophthalmic phenotype is also found in members of a number of unrelated fish families, strongly suggesting the possibility of convergent evolution. However, little is known about the evolutionary processes that shaped diversification in LCR Mastacembelus, their biogeographic origins, or when colonization of the LCR occurred. METHODS: We sequenced mitochondrial and nuclear genes from Mastacembelus species collected in the lower Congo River, and compared them with other African species and Asian representatives as outgroups. We analyzed the sequence data using Maximum Likelihood and Bayesian phylogenetic inference. RESULTS: Bayesian and Maximum Likelihood phylogenetic analyses, and Bayesian coalescent methods for species tree reconstruction, reveal that endemic LCR spiny eels derive from two independent origins, clearly demonstrating convergent evolution of the cryptophthalmic phenotype. Mastacembelus crassus, M. aviceps, and M. simbi form a clade, allied to species found in southern, eastern and central Africa. Unexpectedly, M. brichardi and brachyrhinus fall within a clade otherwise endemic to Lake Tanganikya (LT) ca. 1500 km east of the LCR. Divergence dating suggests the ages of these two clades of LCR endemics differ markedly. The age of the crassus group is estimated at ~4 Myr while colonization of the LCR by the brichardi-brachyrhinus progenitor was considerably more recent, dated at ~0.5 Myr. CONCLUSIONS: The phylogenetic framework of spiny eels presented here, the first to include LCR species, demonstrates that cryptophthalmia and associated traits evolved at least twice in Mastacembelus: once in M. brichardi and at least once in the M. crassus clade. Timing of diversification is broadly consistent with the onset of modern high-energy flow conditions in the LCR and with previous studies of endemic cichlids. The close genetic relationship between M. brichardi and M. brachyrhinus is particularly notable given the extreme difference in phenotype between these species, and additional work is needed to better understand the evolutionary history of diversification in this clade. The findings presented here demonstrate strong, multi-trait convergence in LCR spiny eels, suggesting that extreme selective pressures have shaped numerous phenotypic attributes of the endemic species of this region.


Assuntos
Evolução Biológica , Enguias/genética , África , Animais , Teorema de Bayes , DNA Mitocondrial/genética , Enguias/anatomia & histologia , Enguias/classificação , Filogenia , Rios , Seleção Genética , Análise de Sequência de DNA
12.
Mol Phylogenet Evol ; 89: 205-18, 2015 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-25899306

RESUMO

Elopomorpha is one of the three main clades of living teleost fishes and includes a range of disparate lineages including eels, tarpons, bonefishes, and halosaurs. Elopomorphs were among the first groups of fishes investigated using Hennigian phylogenetic methods and continue to be the object of intense phylogenetic scrutiny due to their economic significance, diversity, and crucial evolutionary status as the sister group of all other teleosts. While portions of the phylogenetic backbone for Elopomorpha are consistent between studies, the relationships among Albula, Pterothrissus, Notacanthiformes, and Anguilliformes remain contentious and difficult to evaluate. This lack of phylogenetic resolution is problematic as fossil lineages are often described and placed taxonomically based on an assumed sister group relationship between Albula and Pterothrissus. In addition, phylogenetic studies using morphological data that sample elopomorph fossil lineages often do not include notacanthiform or anguilliform lineages, potentially introducing a bias toward interpreting fossils as members of the common stem of Pterothrissus and Albula. Here we provide a phylogenetic analysis of DNA sequences sampled from multiple nuclear genes that include representative taxa from Albula, Pterothrissus, Notacanthiformes and Anguilliformes. We integrate our molecular dataset with a morphological character matrix that spans both living and fossil elopomorph lineages. Our results reveal substantial uncertainty in the placement of Pterothrissus as well as all sampled fossil lineages, questioning the stability of the taxonomy of fossil Elopomorpha. However, despite topological uncertainty, our integration of fossil lineages into a Bayesian time calibrated framework provides divergence time estimates for the clade that are consistent with previously published age estimates based on the elopomorph fossil record and molecular estimates resulting from traditional node-dating methods.


Assuntos
Peixes/anatomia & histologia , Peixes/genética , Fósseis , Filogenia , Incerteza , Animais , Teorema de Bayes , Calibragem , Núcleo Celular/genética , Enguias/anatomia & histologia , Enguias/classificação , Enguias/genética , Extinção Biológica , Proteínas de Peixes/genética , Peixes/classificação , Fatores de Tempo
13.
J Fish Biol ; 87(3): 634-45, 2015 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-26242690

RESUMO

A comparative cytogenetic analysis, using both conventional staining techniques and fluorescence in situ hybridization, of six Indo-Pacific moray eels from three different genera (Gymnothorax fimbriatus, Gymnothorax flavimarginatus, Gymnothorax javanicus, Gymnothorax undulatus, Echidna nebulosa and Gymnomuraena zebra), was carried out to investigate the chromosomal differentiation in the family Muraenidae. Four species displayed a diploid chromosome number 2n = 42, which is common among the Muraenidae. Two other species, G. javanicus and G. flavimarginatus, were characterized by different chromosome numbers (2n = 40 and 2n = 36). For most species, a large amount of constitutive heterochromatin was detected in the chromosomes, with species-specific C-banding patterns that enabled pairing of the homologous chromosomes. In all species, the major ribosomal genes were localized in the guanine-cytosine-rich region of one chromosome pair, but in different chromosomal locations. The (TTAGGG)n telomeric sequences were mapped onto chromosomal ends in all muraenid species studied. The comparison of the results derived from this study with those available in the literature confirms a substantial conservation of the diploid chromosome number in the Muraenidae and supports the hypothesis that rearrangements have occurred that have diversified their karyotypes. Furthermore, the finding of two species with different diploid chromosome numbers suggests that additional chromosomal rearrangements, such as Robertsonian fusions, have occurred in the karyotype evolution of the Muraenidae.


Assuntos
Bandeamento Cromossômico , Enguias/genética , Hibridização in Situ Fluorescente , Animais , Evolução Biológica , Diploide , Enguias/classificação , Feminino , Heterocromatina , Oceano Índico , Cariótipo , Masculino , Região Organizadora do Nucléolo/genética , Telômero/genética
14.
BMC Evol Biol ; 14: 138, 2014 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-24947556

RESUMO

BACKGROUND: The two North Atlantic eel species, the European and the American eel, represent an ideal system in which to study parallel selection patterns due to their sister species status and the presence of ongoing gene flow. A panel of 80 coding-gene SNPs previously analyzed in American eel was used to genotype European eel individuals (glass eels) from 8 sampling locations across the species distribution. We tested for single-generation signatures of spatially varying selection in European eel by searching for elevated genetic differentiation using FST-based outlier tests and by testing for significant associations between allele frequencies and environmental variables. RESULTS: We found signatures of possible selection at a total of 11 coding-gene SNPs. Candidate genes for local selection constituted mainly genes with a major role in metabolism as well as defense genes. Contrary to what has been found for American eel, only 2 SNPs in our study correlated with differences in temperature, which suggests that other explanatory variables may play a role. None of the genes found to be associated with explanatory variables in European eel showed any correlations with environmental factors in the previous study in American eel. CONCLUSIONS: The different signatures of selection between species could be due to distinct selective pressures associated with the much longer larval migration for European eel relative to American eel. The lack of parallel selection in North Atlantic eels could also be due to most phenotypic traits being polygenic, thus reducing the likelihood of selection acting on the same genes in both species.


Assuntos
Enguias/classificação , Enguias/genética , Migração Animal , Animais , Enguias/crescimento & desenvolvimento , Enguias/fisiologia , Fluxo Gênico , Frequência do Gene , Interação Gene-Ambiente , Polimorfismo de Nucleotídeo Único
15.
Genet Mol Res ; 13(1): 1127-32, 2014 Feb 21.
Artigo em Inglês | MEDLINE | ID: mdl-24634134

RESUMO

Cytogenetic studies in Gymnothorax funebris revealed a diploid chromosome number 2n = 42 (6 metacentrics, 4 submetacentrics, and 32 acrocentrics, FN = 52). The results obtained are novel and similar to those previously described for species belonging to Muraenidae family. The conventional karyotype is also novel and divergent from other species of the genus Gymnothorax, where a higher proportion of metacentric chromosomes predominate. The data are reported and discussed considering the cytotaxonomy of the genus. These results strongly support the current view that chromosomal alterations such as centric fusion and Robertsonian's translocations have an important role in the evolution of this group.


Assuntos
Cromossomos , Enguias/genética , Especiação Genética , Animais , Aberrações Cromossômicas , Diploide , Enguias/classificação , Evolução Molecular , Cariotipagem , Filogenia
16.
Mol Phylogenet Evol ; 69(3): 884-94, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23831455

RESUMO

Anguilliformes are an ecologically diverse group of predominantly marine fishes whose members are easily recognized by their extremely elongate bodies, and universal lack of pelvic fins. Recent studies based on mitochondrial loci, including full mitogenomes, have called into question the monophyly of both the Anguilliformes, which appear to be paraphyletic without the inclusion of the Saccopharyngiformes (gulper eels and allies), as well as other more commonly known eel families (e.g., Congridae, Serrivomeridae). However, no study to date has investigated anguilliform interrelationships using nuclear loci. Here we present a new phylogenetic hypothesis for the Anguilliformes based on five markers (the nuclear loci Early Growth Hormone 3, Myosin Heavy Polypeptide 6 and Recombinase Activating Gene 1, as well as the mitochondrial genes Cytochrome b and Cytochrome Oxidase I). Our sampling spans 148 species and includes 19 of the 20 extant families of anguilliforms and saccopharyngiforms. Maximum likelihood analysis reveals that saccopharyngiform eels are deeply nested within the anguilliforms, and supports the non-monophyly of Congridae and Nettastomatidae, as well as that of Derichthyidae and Chlopsidae. Our analyses suggest that Protanguilla may be the sister group of the Synaphobranchidae, though the recent hypothesis that this species is the sister group to all other anguilliforms cannot be rejected. The molecular phylogeny, time-calibrated using a Bayesian relaxed clock approach and seven fossil calibration points, reveals a Late Cretaceous origin of this expanded anguilliform clade (stem age ~116 Ma, crown age ~99 Ma). Most major (family level) lineages originated between the end of the Cretaceous and Early Eocene, suggesting that anguilliform radiation may have been facilitated by the recovery of marine ecosystems following the KP extinction.


Assuntos
Evolução Biológica , Enguias/classificação , Filogenia , Animais , Teorema de Bayes , Núcleo Celular/genética , Enguias/genética , Fósseis , Genes Mitocondriais , Funções Verossimilhança , Modelos Genéticos , Análise de Sequência de DNA
17.
Zootaxa ; 3641: 197-200, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-26287079

RESUMO

The first Red-Sea Indo-Pacific alien moray eel in the Eastern Mediterranean is reported here. A single specimen ot Gymnothorax reticularis was captured by a commercial bottom-trawl vessel off the northern coast of Israel. Morphological and anatomical similarities with the single known Red-Sea specimen raise an old taxonomic dilemma.


Assuntos
Enguias/classificação , Animais , Tamanho Corporal , Dentição , Enguias/anatomia & histologia , Enguias/crescimento & desenvolvimento , Israel , Mar Mediterrâneo , Dente/anatomia & histologia
18.
Science ; 379(6632): 572-575, 2023 02 10.
Artigo em Inglês | MEDLINE | ID: mdl-36758078

RESUMO

Accurate species phylogenies are a prerequisite for all evolutionary research. Teleosts are the largest and most diversified group of extant vertebrates, but relationships among their three oldest extant lineages remain unresolved. On the basis of seven high-quality new genome assemblies in Elopomorpha (tarpons, eels), we revisited the topology of the deepest branches of the teleost phylogeny using independent gene sequence and chromosomal rearrangement phylogenomic approaches. These analyses converged to a single scenario that unambiguously places the Elopomorpha and Osteoglossomorpha (arapaima, elephantnose fish) in a monophyletic sister group to all other teleosts, i.e., the Clupeocephala lineage (zebrafish, medaka). This finding resolves more than 50 years of controversy on the evolutionary relationships of these lineages and highlights the power of combining different levels of genome-wide information to solve complex phylogenies.


Assuntos
Evolução Biológica , Peixes , Animais , Enguias/classificação , Enguias/genética , Peixes/classificação , Peixes/genética , Genoma , Filogenia , Peixe-Zebra/classificação , Peixe-Zebra/genética
19.
Proc Biol Sci ; 279(1730): 934-43, 2012 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-21849321

RESUMO

We report the discovery of an enigmatic, small eel-like fish from a 35 m-deep fringing-reef cave in the western Pacific Ocean Republic of Palau that exhibits an unusual suite of morphological characters. Many of these uniquely characterize the Recent members of the 19 families comprising the elopomorph order Anguilliformes, the true eels. Others are found among anguilliforms only in the Cretaceous fossils, and still others are primitive with respect to both Recent and fossil eels. Thus, morphological evidence explicitly places it as the most basal lineage (i.e. the sister group of extant anguilliforms). Phylogenetic analysis and divergence time estimation based on whole mitogenome sequences from various actinopterygians, including representatives of all eel families, demonstrate that this fish represents one of the most basal, independent lineages of the true eels, with a long evolutionary history comparable to that of the entire Anguilliformes (approx. 200 Myr). Such a long, independent evolutionary history dating back to the early Mesozoic and a retention of primitive morphological features (e.g. the presence of a premaxilla, metapterygoid, free symplectic, gill rakers, pseudobranch and distinct caudal fin rays) warrant recognition of this species as a 'living fossil' of the true eels, herein described as Protanguilla palau genus et species nov. in the new family Protanguillidae.


Assuntos
Enguias/classificação , Filogenia , Nadadeiras de Animais/anatomia & histologia , Animais , Enguias/anatomia & histologia , Feminino , Fósseis , Brânquias/anatomia & histologia , Palau
20.
J Fish Biol ; 78(1): 366-72, 2011 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-21235568

RESUMO

The northernmost occurrence of Bassanago albescens in the western Atlantic Ocean (off the coast of Rio de Janeiro, Brazil) is presented and compared with the available data on this species. Specimens formerly identified as Rhynchoconger guppyi from off the southern Brazilian coast are regarded as B. albescens.


Assuntos
Enguias/classificação , Animais , Brasil , Enguias/anatomia & histologia
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