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1.
Mol Cell ; 64(3): 480-492, 2016 11 03.
Artigo em Inglês | MEDLINE | ID: mdl-27746019

RESUMO

The synthesis of ribosomes is regulated by both amino acid abundance and the availability of ATP, which regenerates guanosine triphosphate (GTP), powers ribosomes, and promotes transcription of rRNA genes. We now report that bacteria supersede both of these controls when experiencing low cytosolic magnesium (Mg2+), a divalent cation essential for ribosome stabilization and for neutralization of ATP's negative charge. We uncover a regulatory circuit that responds to low cytosolic Mg2+ by promoting expression of proteins that import Mg2+ and lower ATP amounts. This response reduces the levels of ATP and ribosomes, making Mg2+ ions available for translation. Mutants defective in Mg2+ uptake and unable to reduce ATP levels accumulate non-functional ribosomal components and undergo translational arrest. Our findings establish a paradigm whereby cells reduce the amounts of translating ribosomes to carry out protein synthesis.


Assuntos
Regulação Bacteriana da Expressão Gênica , Magnésio/farmacologia , Biossíntese de Proteínas/efeitos dos fármacos , Proteínas Ribossômicas/biossíntese , Ribossomos/efeitos dos fármacos , Salmonella typhimurium/efeitos dos fármacos , Trifosfato de Adenosina/metabolismo , Cátions Bivalentes , Meios de Cultura/química , Meios de Cultura/farmacologia , Escherichia coli/genética , Escherichia coli/metabolismo , Guanosina Trifosfato/biossíntese , Magnésio/metabolismo , Biogênese de Organelas , Proteínas Ribossômicas/genética , Ribossomos/genética , Ribossomos/metabolismo , Salmonella typhimurium/genética , Salmonella typhimurium/metabolismo , Eletricidade Estática , Estresse Fisiológico/genética
2.
Dev Biol ; 478: 89-101, 2021 10.
Artigo em Inglês | MEDLINE | ID: mdl-34048735

RESUMO

Inosine monophosphate dehydrogenase (IMPDH) catalyzes the rate-limiting step in de novo guanine nucleotide biosynthesis. Its activity is negatively regulated by the binding of GTP. IMPDH can form a membraneless subcellular structure termed the cytoophidium in response to certain changes in the metabolic status of the cell. The polymeric form of IMPDH, which is the subunit of the cytoophidium, has been shown to be more resistant to the inhibition by GTP at physiological concentrations, implying a functional correlation between cytoophidium formation and the upregulation of GTP biosynthesis. Herein we demonstrate that zebrafish IMPDH1b and IMPDH2 isoforms can assemble abundant cytoophidium in most of cultured cells under stimuli, while zebrafish IMPDH1a shows distinctive properties of forming the cytoophidium in different cell types. Point mutations that disrupt cytoophidium structure in mammalian models also prevent the aggregation of zebrafish IMPDHs. In addition, we discover the presence of the IMPDH cytoophidium in various tissues of larval and adult fish under normal growth conditions. Our results reveal that polymerization and cytoophidium assembly of IMPDH can be a regulatory machinery conserved among vertebrates, and with specific physiological purposes.


Assuntos
Estruturas Citoplasmáticas/ultraestrutura , IMP Desidrogenase/química , Proteínas de Peixe-Zebra/química , Peixe-Zebra/metabolismo , Animais , Linhagem Celular , Estruturas Citoplasmáticas/química , Expressão Gênica , Guanosina Trifosfato/biossíntese , Guanosina Trifosfato/metabolismo , Humanos , IMP Desidrogenase/genética , IMP Desidrogenase/metabolismo , Isoenzimas/química , Isoenzimas/genética , Mutação Puntual , Regulação para Cima , Peixe-Zebra/crescimento & desenvolvimento , Proteínas de Peixe-Zebra/genética , Proteínas de Peixe-Zebra/metabolismo
3.
Mol Microbiol ; 113(6): 1155-1169, 2020 06.
Artigo em Inglês | MEDLINE | ID: mdl-32052499

RESUMO

In bacteria, guanosine (penta)tetra-phosphate ([p]ppGpp) is essential for controlling intracellular metabolism that is needed to adapt to environmental changes, such as amino acid starvation. The (p)ppGpp0 strain of Bacillus subtilis, which lacks (p)ppGpp synthetase, is unable to form colonies on minimal medium. Here, we found suppressor mutations in the (p)ppGpp0 strain, in the purine nucleotide biosynthesis genes, prs, purF and rpoB/C, which encode RNA polymerase core enzymes. In comparing our work with prior studies of ppGpp0 suppressors, we discovered that methionine addition masks the suppression on minimal medium, especially of rpoB/C mutations. Furthermore, methionine addition increases intracellular GTP in rpoB suppressor and this effect is decreased by inhibiting GTP biosynthesis, indicating that methionine addition activated GTP biosynthesis and inhibited growth under amino acid starvation conditions in (p)ppGpp0 backgrounds. Furthermore, we propose that the increase in intracellular GTP levels induced by methionine is due to methionine derivatives that increase the activity of the de novo GTP biosynthesis enzyme, GuaB. Our study sheds light on the potential relationship between GTP homeostasis and methionine metabolism, which may be the key to adapting to environmental changes.


Assuntos
Bacillus subtilis/metabolismo , Guanosina Pentafosfato/metabolismo , Guanosina Trifosfato/biossíntese , Ligases/metabolismo , Metionina/metabolismo , Trifosfato de Adenosina/metabolismo , Bacillus subtilis/genética , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , RNA Polimerases Dirigidas por DNA/genética , Regulação Bacteriana da Expressão Gênica/genética , Ligases/genética , Supressão Genética/genética , Transcrição Gênica/genética
4.
Biol Chem ; 401(1): 131-142, 2019 12 18.
Artigo em Inglês | MEDLINE | ID: mdl-31600135

RESUMO

Elongation factor G (EF-G) is a translational GTPase that acts at several stages of protein synthesis. Its canonical function is to catalyze tRNA movement during translation elongation, but it also acts at the last step of translation to promote ribosome recycling. Moreover, EF-G has additional functions, such as helping the ribosome to maintain the mRNA reading frame or to slide over non-coding stretches of the mRNA. EF-G has an unconventional GTPase cycle that couples the energy of GTP hydrolysis to movement. EF-G facilitates movement in the GDP-Pi form. To convert the energy of hydrolysis to movement, it requires various ligands in the A site, such as a tRNA in translocation, an mRNA secondary structure element in ribosome sliding, or ribosome recycling factor in post-termination complex disassembly. The ligand defines the direction and timing of EF-G-facilitated motion. In this review, we summarize recent advances in understanding the mechanism of EF-G action as a remarkable force-generating GTPase.


Assuntos
Guanosina Trifosfato/biossíntese , Fator G para Elongação de Peptídeos/genética , Biossíntese de Proteínas/genética , Ribossomos/genética , GTP Fosfo-Hidrolases/genética , Guanosina Trifosfato/genética , Hidrólise , Fator G para Elongação de Peptídeos/biossíntese , RNA Mensageiro/genética , RNA de Transferência/genética
5.
Biotechnol Bioeng ; 116(12): 3324-3332, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31478191

RESUMO

3-Fucosyllactose (3-FL) is one of the major fucosylated oligosaccharides in human milk. Along with 2'-fucosyllactose (2'-FL), it is known for its prebiotic, immunomodulator, neonatal brain development, and antimicrobial function. Whereas the biological production of 2'-FL has been widely studied and made significant progress over the years, the biological production of 3-FL has been hampered by the low activity and insoluble expression of α-1,3-fucosyltransferase (FutA), relatively low abundance in human milk oligosaccharides compared with 2'-FL, and lower digestibility of 3-FL than 2'-FL by bifidobacteria. In this study, we report the gram-scale production of 3-FL using E. coli BL21(DE3). We previously generated the FutA quadruple mutant (mFutA) with four site mutations at S46F, A128N, H129E, Y132I, and its specific activity was increased by nearly 15 times compared with that of wild-type FutA owing to the increase in kcat and the decrease in Km . We overexpressed mFutA in its maximum expression level, which was achieved by the optimization of yeast extract concentration in culture media. We also overexpressed L-fucokinase/GDP- L-fucose pyrophosphorylase to increase the supply of GDP-fucose in the cytoplasm. To increase the mass of recombinant whole-cell catalysts, the host E. coli BW25113 was switched to E. coli BL21(DE3) because of the lower acetate accumulation of E. coli BL21(DE3) than that of E. coli BW25113. Finally, the lactose operon was modified by partially deleting the sequence of LacZ (lacZΔm15) for better utilization of D-lactose. Production using the lacZΔm15 mutant yielded 3-FL concentration of 4.6 g/L with the productivity of 0.076 g·L-1 ·hr-1 and the specific 3-FL yield of 0.5 g/g dry cell weight.


Assuntos
Proteínas de Escherichia coli , Escherichia coli , Guanosina Trifosfato , Engenharia Metabólica , Leite Humano/química , Oligossacarídeos , beta-Galactosidase , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Guanosina Difosfato Fucose/genética , Guanosina Difosfato Fucose/metabolismo , Guanosina Trifosfato/biossíntese , Guanosina Trifosfato/genética , Humanos , Oligossacarídeos/biossíntese , Oligossacarídeos/química , Oligossacarídeos/genética , Trissacarídeos/genética , Trissacarídeos/metabolismo , beta-Galactosidase/genética , beta-Galactosidase/metabolismo
6.
Proc Natl Acad Sci U S A ; 113(12): E1710-9, 2016 Mar 22.
Artigo em Inglês | MEDLINE | ID: mdl-26951678

RESUMO

The stringent response is a survival mechanism used by bacteria to deal with stress. It is coordinated by the nucleotides guanosine tetraphosphate and pentaphosphate [(p)ppGpp], which interact with target proteins to promote bacterial survival. Although this response has been well characterized in proteobacteria, very little is known about the effectors of this signaling system in Gram-positive species. Here, we report on the identification of seven target proteins for the stringent response nucleotides in the Gram-positive bacterium Staphylococcus aureus We demonstrate that the GTP synthesis enzymes HprT and Gmk bind with a high affinity, leading to an inhibition of GTP production. In addition, we identified five putative GTPases--RsgA, RbgA, Era, HflX, and ObgE--as (p)ppGpp target proteins. We show that RsgA, RbgA, Era, and HflX are functional GTPases and that their activity is promoted in the presence of ribosomes but strongly inhibited by the stringent response nucleotides. By characterizing the function of RsgA in vivo, we ascertain that this protein is involved in ribosome assembly, with an rsgA deletion strain, or a strain inactivated for GTPase activity, displaying decreased growth, a decrease in the amount of mature 70S ribosomes, and an increased level of tolerance to antimicrobials. We additionally demonstrate that the interaction of ppGpp with cellular GTPases is not unique to the staphylococci, as homologs from Bacillus subtilis and Enterococcus faecalis retain this ability. Taken together, this study reveals ribosome inactivation as a previously unidentified mechanism through which the stringent response functions in Gram-positive bacteria.


Assuntos
Proteínas de Bactérias/metabolismo , Farmacorresistência Bacteriana/genética , GTP Fosfo-Hidrolases/metabolismo , Guanosina Tetrafosfato/fisiologia , Biogênese de Organelas , Ribossomos/metabolismo , Staphylococcus aureus/metabolismo , Antibacterianos/farmacologia , Bacillus subtilis/metabolismo , Enterococcus faecalis/metabolismo , Escherichia coli , Biblioteca Gênica , Guanosina Trifosfato/biossíntese , Ensaios de Triagem em Larga Escala , Testes de Sensibilidade Microbiana , Fases de Leitura Aberta , Ligação Proteica , Ribossomos/ultraestrutura , Staphylococcus aureus/efeitos dos fármacos , Staphylococcus aureus/crescimento & desenvolvimento
7.
Antimicrob Agents Chemother ; 59(10): 6328-36, 2015 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-26248377

RESUMO

The prevention of mother-to-child transmission (MTCT) of HIV is a crucial component in HIV therapy. Nucleoside reverse transcriptase inhibitors (NRTIs), primarily 3'-azido-3'-thymidine (AZT [zidovudine]), have been used to treat both mothers and neonates. While AZT is being replaced with less toxic drugs in treating mothers in MTCT prevention, it is still commonly used to treat neonates. Problems related to mitochondrial toxicity and potential mutagenesis associated with AZT treatment have been reported in treated cohorts. Yet little is known concerning the metabolism and potential toxicity of AZT on embryonic and neonatal tissues, especially considering that the enzymes of nucleoside metabolism change dramatically as many tissues convert from hyperplastic to hypertrophic growth during this period. AZT is known to inhibit thymidine phosphorylation and potentially alter deoxynucleoside triphosphate (dNTP) pools in adults. This study examines the effects of AZT on dNTP pools, mRNA expression of deoxynucleoside/deoxynucleotide metabolic enzymes, and mitochondrial DNA levels in a neonatal rat model. Results show that AZT treatment dramatically altered dNTP pools in the first 7 days of life after birth, which normalized to age-matched controls in the second and third weeks. Additionally, AZT treatment dramatically increased the mRNA levels of many enzymes involved in deoxynucleotide synthesis and mitochondrial biogenesis during the first week of life, which normalized to age-matched controls by the third week. These results were correlated with depletion of mitochondrial DNA noted in the second week. Taken together, results demonstrated that AZT treatment has a powerful effect on the deoxynucleotide synthesis pathways that may be associated with toxicity and mutagenesis.


Assuntos
Fármacos Anti-HIV/toxicidade , DNA Mitocondrial/antagonistas & inibidores , Coração/efeitos dos fármacos , RNA Mensageiro/antagonistas & inibidores , Inibidores da Transcriptase Reversa/toxicidade , Zidovudina/toxicidade , Trifosfato de Adenosina/antagonistas & inibidores , Trifosfato de Adenosina/biossíntese , Animais , Animais Recém-Nascidos , Citidina Trifosfato/antagonistas & inibidores , Citidina Trifosfato/biossíntese , Variações do Número de Cópias de DNA/efeitos dos fármacos , DNA Mitocondrial/biossíntese , Feminino , Regulação da Expressão Gênica , Guanosina Trifosfato/antagonistas & inibidores , Guanosina Trifosfato/biossíntese , Proteínas Mitocondriais/antagonistas & inibidores , Proteínas Mitocondriais/genética , Proteínas Mitocondriais/metabolismo , Fosforilação/efeitos dos fármacos , Gravidez , RNA Mensageiro/biossíntese , RNA Mensageiro/genética , Ratos , Ratos Sprague-Dawley , Uridina Trifosfato/antagonistas & inibidores , Uridina Trifosfato/biossíntese
8.
PLoS Pathog ; 8(10): e1002957, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-23071437

RESUMO

We have investigated the potential of the GTP synthesis pathways as chemotherapeutic targets in the human pathogen Cryptococcus neoformans, a common cause of fatal fungal meningoencephalitis. We find that de novo GTP biosynthesis, but not the alternate salvage pathway, is critical to cryptococcal dissemination and survival in vivo. Loss of inosine monophosphate dehydrogenase (IMPDH) in the de novo pathway results in slow growth and virulence factor defects, while loss of the cognate phosphoribosyltransferase in the salvage pathway yielded no phenotypes. Further, the Cryptococcus species complex displays variable sensitivity to the IMPDH inhibitor mycophenolic acid, and we uncover a rare drug-resistant subtype of C. gattii that suggests an adaptive response to microbial IMPDH inhibitors in its environmental niche. We report the structural and functional characterization of IMPDH from Cryptococcus, revealing insights into the basis for drug resistance and suggesting strategies for the development of fungal-specific inhibitors. The crystal structure reveals the position of the IMPDH moveable flap and catalytic arginine in the open conformation for the first time, plus unique, exploitable differences in the highly conserved active site. Treatment with mycophenolic acid led to significantly increased survival times in a nematode model, validating de novo GTP biosynthesis as an antifungal target in Cryptococcus.


Assuntos
Cryptococcus neoformans/enzimologia , Cryptococcus neoformans/patogenicidade , Guanosina Trifosfato/biossíntese , IMP Desidrogenase/química , IMP Desidrogenase/metabolismo , Ácido Micofenólico/farmacologia , Animais , Antifúngicos/farmacologia , Caenorhabditis elegans/microbiologia , Cryptococcus gattii/efeitos dos fármacos , Cryptococcus gattii/genética , Cryptococcus gattii/isolamento & purificação , Cryptococcus neoformans/efeitos dos fármacos , Cryptococcus neoformans/metabolismo , Cristalografia por Raios X , Farmacorresistência Fúngica/genética , Inibidores Enzimáticos/farmacologia , IMP Desidrogenase/antagonistas & inibidores , IMP Desidrogenase/genética , Meningoencefalite/microbiologia
9.
Proc Natl Acad Sci U S A ; 108(48): 19264-9, 2011 Nov 29.
Artigo em Inglês | MEDLINE | ID: mdl-22084084

RESUMO

Pancreatic ß-cells are an essential source of insulin and their destruction because of autoimmunity causes type I diabetes. We conducted a chemical screen to identify compounds that would induce the differentiation of insulin-producing ß-cells in vivo. To do this screen, we brought together the use of transgenic zebrafish as a model of ß-cell differentiation, a unique multiwell plate that allows easy visualization of lateral views of swimming larval fish and a library of clinical drugs. We identified six hits that can induce precocious differentiation of secondary islets in larval zebrafish. Three of these six hits were known drugs with a considerable background of published data on mechanism of action. Using pharmacological approaches, we have identified and characterized two unique pathways in ß-cell differentiation in the zebrafish, including down-regulation of GTP production and retinoic acid biosynthesis.


Assuntos
Diferenciação Celular/efeitos dos fármacos , Descoberta de Drogas/métodos , Células Secretoras de Insulina/citologia , Células Secretoras de Insulina/efeitos dos fármacos , Preparações Farmacêuticas/metabolismo , Acetanilidas/farmacologia , Animais , Animais Geneticamente Modificados , Ácidos Cafeicos/farmacologia , Linhagem Celular Tumoral , Proliferação de Células , Primers do DNA/genética , Dimetil Sulfóxido , Relação Dose-Resposta a Droga , Epirizol/farmacologia , Imunofluorescência , Proteínas de Fluorescência Verde , Guanosina Trifosfato/biossíntese , Proteína HMGB1/metabolismo , Larva/efeitos dos fármacos , Microscopia Confocal , Ácido Micofenólico/farmacologia , Reação em Cadeia da Polimerase em Tempo Real , Ácidos Sulfanílicos/farmacologia , Tretinoína/metabolismo , Peixe-Zebra , p-Aminoazobenzeno/análogos & derivados , p-Aminoazobenzeno/farmacologia
10.
J Cell Biol ; 223(4)2024 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-38323936

RESUMO

Inosine monophosphate dehydrogenase (IMPDH) is the rate-limiting enzyme in guanosine triphosphate (GTP) synthesis and assembles into filaments in cells, which desensitizes the enzyme to feedback inhibition and boosts nucleotide production. The vertebrate retina expresses two splice variants IMPDH1(546) and IMPDH1(595). In bovine retinas, residue S477 is preferentially phosphorylated in the dark, but the effects on IMPDH1 activity and regulation are unclear. Here, we generated phosphomimetic mutants to investigate structural and functional consequences of S477 phosphorylation. The S477D mutation resensitized both variants to GTP inhibition but only blocked assembly of IMPDH1(595) filaments. Cryo-EM structures of both variants showed that S477D specifically blocks assembly of a high-activity assembly interface, still allowing assembly of low-activity IMPDH1(546) filaments. Finally, we discovered that S477D exerts a dominant-negative effect in cells, preventing endogenous IMPDH filament assembly. By modulating the structure and higher-order assembly of IMPDH, S477 phosphorylation acts as a mechanism for downregulating retinal GTP synthesis in the dark when nucleotide turnover is decreased.


Assuntos
Citoesqueleto , Guanosina Trifosfato , IMP Desidrogenase , Retina , Animais , Bovinos , Guanosina Trifosfato/biossíntese , Nucleotídeos , Fosforilação , Retina/enzimologia , IMP Desidrogenase/metabolismo
11.
Exp Cell Res ; 316(20): 3443-53, 2010 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-20603113

RESUMO

The deoxyguanosine (GdR) analog guanine-ß-d-arabinofuranoside (araG) has a specific toxicity for T lymphocytes. Also GdR is toxic for T lymphocytes, provided its degradation by purine nucleoside phosphorylase (PNP) is prevented, by genetic loss of PNP or by enzyme inhibitors. The toxicity of both nucleosides requires their phosphorylation to triphosphates, indicating involvement of DNA replication. In cultured cells we found by isotope-flow experiments with labeled araG a rapid accumulation and turnover of araG phosphates regulated by cytosolic and mitochondrial kinases and deoxynucleotidases. At equilibrium their partition between cytosol and mitochondria depended on the substrate saturation kinetics and cellular abundance of the kinases leading to higher araGTP concentrations in mitochondria. dGTP interfered with the allosteric regulation of ribonucleotide reduction, led to highly imbalanced dNTP pools with gradual inhibition of DNA synthesis and cell-cycle arrest at the G1-S boundary. AraGTP had no effect on ribonucleotide reduction. AraG was in minute amounts incorporated into nuclear DNA and stopped DNA synthesis arresting cells in S-phase. Both nucleosides eventually induced caspases and led to apoptosis. We used high, clinically relevant concentrations of araG, toxic for nuclear DNA synthesis. Our experiments do not exclude an effect on mitochondrial DNA at low araG concentrations when phosphorylation occurs mainly in mitochondria.


Assuntos
Arabinonucleosídeos/metabolismo , Arabinonucleotídeos/metabolismo , Ciclo Celular , Nucleotídeos de Desoxiguanina/metabolismo , Desoxiguanosina/metabolismo , Guanosina Trifosfato/análogos & derivados , Leucemia-Linfoma Linfoblástico de Células T Precursoras/enzimologia , Leucemia-Linfoma Linfoblástico de Células T Precursoras/patologia , Animais , Apoptose/efeitos dos fármacos , Arabinonucleosídeos/farmacologia , Arabinonucleotídeos/biossíntese , Biocatálise , Células CHO , Caspases/metabolismo , Ciclo Celular/efeitos dos fármacos , Linhagem Celular , Linhagem Celular Tumoral , Proliferação de Células/efeitos dos fármacos , Cricetinae , Cricetulus , Citosol/enzimologia , DNA/metabolismo , Replicação do DNA/efeitos dos fármacos , Desoxicitidina Quinase/genética , Desoxicitidina Quinase/metabolismo , Nucleotídeos de Desoxiguanina/biossíntese , Desoxiguanosina/farmacologia , Desoxirribonucleotídeos/metabolismo , Fibroblastos/enzimologia , Fase G1/efeitos dos fármacos , Guanosina Trifosfato/biossíntese , Guanosina Trifosfato/metabolismo , Humanos , Hipoxantina Fosforribosiltransferase/genética , Cinética , Mitocôndrias/enzimologia , Fosfotransferases (Aceptor do Grupo Álcool)/metabolismo , Leucemia-Linfoma Linfoblástico de Células T Precursoras/tratamento farmacológico , Purina-Núcleosídeo Fosforilase/metabolismo , Fase S/efeitos dos fármacos
12.
Elife ; 92020 04 07.
Artigo em Inglês | MEDLINE | ID: mdl-32254022

RESUMO

We report the in vivo regulation of Inosine-5´-monophosphate dehydrogenase 1 (IMPDH1) in the retina. IMPDH1 catalyzes the rate-limiting step in the de novo synthesis of guanine nucleotides, impacting the cellular pools of GMP, GDP and GTP. Guanine nucleotide homeostasis is central to photoreceptor cells, where cGMP is the signal transducing molecule in the light response. Mutations in IMPDH1 lead to inherited blindness. We unveil a light-dependent phosphorylation of retinal IMPDH1 at Thr159/Ser160 in the Bateman domain that desensitizes the enzyme to allosteric inhibition by GDP/GTP. When exposed to bright light, living mice increase the rate of GTP and ATP synthesis in their retinas; concomitant with IMPDH1 aggregate formation at the outer segment layer. Inhibiting IMPDH activity in living mice delays rod mass recovery. We unveil a novel mechanism of regulation of IMPDH1 in vivo, important for understanding GTP homeostasis in the retina and the pathogenesis of adRP10 IMPDH1 mutations.


Assuntos
Guanosina Trifosfato/biossíntese , IMP Desidrogenase/genética , Luz , Processamento de Proteína Pós-Traducional , Retina/metabolismo , Retina/efeitos da radiação , Trifosfato de Adenosina/biossíntese , Animais , Fenômenos Bioquímicos , Regulação da Expressão Gênica , Homeostase , Camundongos , Camundongos Endogâmicos C57BL , Mutação , Fosforilação , Estimulação Luminosa , Células Fotorreceptoras/fisiologia
13.
Science ; 182(4114): 836-7, 1973 Nov 23.
Artigo em Inglês | MEDLINE | ID: mdl-4795749

RESUMO

In the presence of 10(-4) to 10(-5) molar adenosine, established cell lines of fibroblastic or lymphoid origin die of pyrimidine starvation. Less than lethal concentrations inhibit cell growth. Over a broad concentration range, the effects of adenosine are prevented by providing a suitable pyrimidine source. We suggest that the recently described immune deficiency disease associated with absence of adenosine deaminase may be the result of pyrimidine starvation induced by adenosine nucleotides in cells of the lymphoid system.


Assuntos
Adenosina/farmacologia , Aminoidrolases/metabolismo , Nucleotídeos de Pirimidina/biossíntese , Adenosina/antagonistas & inibidores , Difosfato de Adenosina/biossíntese , Trifosfato de Adenosina/biossíntese , Adolescente , Animais , Linhagem Celular , Nucleotídeos de Citosina/biossíntese , Feminino , Fibroblastos , Nucleotídeos de Guanina/biossíntese , Guanosina Trifosfato/biossíntese , Humanos , Mononucleose Infecciosa , Linfócitos , Linfoma , Camundongos , Nucleotídeos de Uracila/biossíntese , Uridina/farmacologia
14.
Neuropharmacology ; 148: 347-357, 2019 04.
Artigo em Inglês | MEDLINE | ID: mdl-30710569

RESUMO

Spinal cord injury results in sensation dysfunction. This study explored miR-142-3p, which acts a critical role in sciatic nerve conditioning injury (SNCI) promoting the repair of the dorsal column injury and validated its function on primary sensory neuron(DRG). miR-142-3p expression increased greatly in the spinal cord dorsal column lesion (SDCL) group and increased slightly in the SNCI group. Subsequently, the expression of adenylate cyclase 9 (AC9), the target gene of miR-142-3p, declined sharply in the SDCL group and declined limitedly in the SNCI group. The expression trend of cAMP was opposite to that of miR-142-3p. MiR-142-3p inhibitor improved the axon length, upregulated the expression of AC9, cAMP, p-CREB, IL-6, and GAP43, and downregulated the expression of GTP-RhoA. miR-142-3p inhibitor combined with AC9 siRNA showed shorter axon length, the expression of AC9, cAMP, p-CREB, IL-6, and GAP43 was decreased, and the expression of GTP-RhoA was increased. H89 and AG490, inhibitors of cAMP/PKA pathway and IL6/STAT3/GAP43 axis, respectively, declined the enhanced axonal growth by miR-142-3p inhibitor and altered the expression level of the corresponding proteins. Thus, a substitution therapy using Sorafenib that downregulates the miR-142-3p expression for SNCI was investigated. The results showed the effect of Sorafenib was similar to that of miR-142-3p inhibitor and SNCI on both axon growth in vitro and sensory conduction function recovery in vivo. In conclusion, miR-142-3p acts a pivotal role in SNCI promoting the repair of dorsal column injury. Sorafenib mimics the treatment effect of SNCI via downregulation of miR-142-3p, subsequently, promoting sensory conduction function recovery post dorsal column injury.


Assuntos
Adenilil Ciclases/fisiologia , AMP Cíclico/fisiologia , MicroRNAs/fisiologia , Sensação/efeitos dos fármacos , Sorafenibe/farmacologia , Traumatismos da Medula Espinal/fisiopatologia , Adenilil Ciclases/biossíntese , Animais , AMP Cíclico/biossíntese , Proteína de Ligação ao Elemento de Resposta ao AMP Cíclico/metabolismo , Regulação para Baixo/efeitos dos fármacos , Feminino , Proteína GAP-43/biossíntese , Guanosina Trifosfato/análogos & derivados , Guanosina Trifosfato/biossíntese , Interleucina-6/biossíntese , Isoquinolinas/farmacologia , MicroRNAs/antagonistas & inibidores , MicroRNAs/biossíntese , Fosforilação/efeitos dos fármacos , RNA Interferente Pequeno/farmacologia , Ratos , Recuperação de Função Fisiológica/efeitos dos fármacos , Rodaminas , Nervo Isquiático/lesões , Nervo Isquiático/metabolismo , Transdução de Sinais/efeitos dos fármacos , Traumatismos da Medula Espinal/metabolismo , Sulfonamidas/farmacologia , Tirfostinas/farmacologia , Regulação para Cima/efeitos dos fármacos
15.
Neuron ; 30(1): 197-210, 2001 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-11343655

RESUMO

Nucleoside diphosphate kinase (NDK), an enzyme encoded by the Drosophila abnormal wing discs (awd) or human nm23 tumor suppressor genes, generates nucleoside triphosphates from respective diphosphates. We demonstrate that NDK regulates synaptic vesicle internalization at the stage where function of the dynamin GTPase is required. awd mutations lower the temperature at which behavioral paralysis, synaptic failure, and blocked membrane internalization occur at dynamin-deficient, shi(ts), mutant nerve terminals. Hypomorphic awd alleles display shi(ts)-like defects. NDK is present at synapses and its enzymatic activity is essential for normal presynaptic function. We suggest a model in which dynamin activity in nerve terminals is highly dependent on NDK-mediated supply of GTP. This connection between NDK and membrane internalization further strengthens an emerging hypothesis that endocytosis, probably of activated growth factor receptors, is an important tumor suppressor activity in vivo.


Assuntos
Proteínas de Drosophila , Endocitose/genética , GTP Fosfo-Hidrolases/metabolismo , Guanosina Trifosfato/biossíntese , Núcleosídeo-Difosfato Quinase/metabolismo , Terminações Pré-Sinápticas/enzimologia , Vesículas Sinápticas/enzimologia , Alelos , Animais , Temperatura Corporal/genética , Encéfalo/metabolismo , Drosophila melanogaster/enzimologia , Drosophila melanogaster/genética , Dinaminas , Proteínas de Insetos/genética , Proteínas de Insetos/metabolismo , Microscopia Eletrônica , Proteínas Monoméricas de Ligação ao GTP/genética , Proteínas Monoméricas de Ligação ao GTP/metabolismo , Mutação/fisiologia , Nucleosídeo NM23 Difosfato Quinases , Invasividade Neoplásica/genética , Paralisia/enzimologia , Paralisia/genética , Paralisia/fisiopatologia , Fenótipo , Terminações Pré-Sinápticas/ultraestrutura , Transporte Proteico/genética , Vesículas Sinápticas/ultraestrutura , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
16.
J Clin Invest ; 92(2): 872-82, 1993 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-8349822

RESUMO

Recent studies suggest a permissive requirement for guanosine 5'-triphosphate (GTP) in insulin release, based on the use of GTP synthesis inhibitors (such as myocophenolic acid) acting at inosine monophosphate (IMP) dehydrogenase; herein, we examine the glucose dependency of GTP synthesis. Mycophenolic acid inhibited insulin secretion equally well after islet culture at 7.8 or 11.1 mM glucose (51% inhibition) but its effect was dramatically attenuated when provided at < or = 6.4 mM glucose (13% inhibition; P < 0.001). These observations were explicable by a stimulation of islet GTP synthesis derived from IMP since, at high glucose: (a) total GTP content was augmented; (b) a greater decrement in GTP (1.75 vs. 1.05 pmol/islet) was induced by mycophenolic acid; and (c) a smaller "pool" of residual GTP persisted after drug treatment. Glucose also accelerated GTP synthesis from exogenous guanine ("salvage" pathway) and increased content of a pyrimidine, uridine 5'-triphosphate (UTP), suggesting that glucose augments production of a common regulatory intermediate (probably 5-phosphoribosyl-1-pyrophosphate). Pathway-specific radiolabeling studies confirmed that glucose tripled both salvage and de novo synthesis of nucleotides. We conclude that steep changes in the biosynthesis of cytosolic pools of GTP occur at modest changes in glucose concentrations, a finding which may have relevance to the adaptive (patho) physiologic responses of islets to changes in ambient glucose levels.


Assuntos
Glucose/farmacologia , Guanosina Trifosfato/biossíntese , Insulina/metabolismo , Ilhotas Pancreáticas/metabolismo , Ácido Micofenólico/farmacologia , Trifosfato de Adenosina/metabolismo , Animais , Células Cultivadas , Cromatografia Líquida de Alta Pressão , Glicina/metabolismo , Guanina/metabolismo , Guanina/farmacologia , Hipoxantina , Hipoxantinas/metabolismo , Secreção de Insulina , Ilhotas Pancreáticas/efeitos dos fármacos , Cinética , Masculino , Ratos , Ratos Sprague-Dawley , Uridina Trifosfato/metabolismo
17.
FEBS J ; 274(8): 1983-90, 2007 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-17355283

RESUMO

Mollicutes are wall-less bacteria and cause various diseases in humans, animals and plants. They have the smallest genomes with low G + C content and lack many genes of DNA, RNA and protein precursor biosynthesis. Nucleoside diphosphate kinase (NDK), a house-keeping enzyme that plays a critical role in the synthesis of nucleic acids precursors, i.e. NTPs and dNTPs, is absent in all the Mollicutes genomes sequenced to date. Therefore, it would be of interest to know how Mollicutes synthesize dNTPs/NTPs without NDK. To answer this question, nucleoside monophosphate kinases (NMPKs) from Ureaplasma were studied regarding their role in the synthesis of NTPs/dNTPs. In this work, Ureaplasma adenylate kinase, cytidylate kinase, uridylate kinase and thymidylate kinase were cloned and expressed in Escherichia coli. The recombinant enzymes were purified and characterized. These NMPKs are base specific, as indicated by their names, and capable of converting (d)NMPs directly to (d)NTPs. The catalytic rates of (d)NTPs and (d)NDP synthesis by these NMPKs were determined using tritium-labelled (d)NMPs, and the rates for (d)NDP synthesis, in general, were much higher (up to 100-fold) than that of (d)NTP. Equilibrium studies with adenylate kinase suggested that the rates of NTPs/dNTPs synthesis by NMPKs in vivo are probably regulated by the levels of (d)NMPs. These results strongly indicate that NMPKs could substitute the NDK function in vivo.


Assuntos
Trifosfato de Adenosina/biossíntese , Citidina Trifosfato/biossíntese , Guanosina Trifosfato/biossíntese , Núcleosídeo-Fosfato Quinase/fisiologia , Ureaplasma/enzimologia , Adenilato Quinase/fisiologia , Clonagem Molecular , Núcleosídeo-Difosfato Quinase/fisiologia , Especificidade por Substrato
18.
Sci Rep ; 7: 44324, 2017 03 15.
Artigo em Inglês | MEDLINE | ID: mdl-28295017

RESUMO

Many antimicrobial peptides are synthesized non-ribosomally in bacteria, but little is known about their subcellular route of biosynthesis, their mode of intracellular accumulation, or their role in the physiology of the producer cells. Here, we present a comprehensive view on the biosynthesis of gramicidin S (GS) in Aneurinibacillus migulanus, having observed a peripheral membrane localization of its synthetases. The peptide gets accumulated in nano-globules, which mature by fusion into larger granules and end up within vacuolar structures. These granules serve as energy storage devices, as they contain GS molecules that are non-covalently attached to alkyl phosphates and protect them from dephosphorylation and premature release of energy. This finding of a fundamentally new type of high-energy phosphate storage mechanism can explain the curious role of GS biosynthesis in the physiology of the bacterial producer cells. The unknown role of the GrsT protein, which is part of the non-ribosomal GS synthetase operon, can thus be assumed to be responsible for the biosynthesis of alkyl phosphates. GS binding to alkyl phosphates may suggest its general affinity to phosphagens such as ATP and GTP, which can represent the important intracellular targets in pathogenic bacteria.


Assuntos
Antibacterianos/biossíntese , Bacillales/metabolismo , Proteínas de Bactérias/genética , Grânulos Citoplasmáticos/metabolismo , Regulação Bacteriana da Expressão Gênica , Gramicidina/biossíntese , Trifosfato de Adenosina/biossíntese , Isomerases de Aminoácido/genética , Isomerases de Aminoácido/metabolismo , Bacillales/genética , Bacillales/ultraestrutura , Proteínas de Bactérias/metabolismo , Membrana Celular/metabolismo , Membrana Celular/ultraestrutura , Grânulos Citoplasmáticos/ultraestrutura , Guanosina Trifosfato/biossíntese , Isoenzimas/genética , Isoenzimas/metabolismo , Complexos Multienzimáticos/genética , Complexos Multienzimáticos/metabolismo , Óperon , Peptídeo Sintases/genética , Peptídeo Sintases/metabolismo , Ligação Proteica , Tioléster Hidrolases/genética , Tioléster Hidrolases/metabolismo
19.
Cancer Res ; 35(6): 1427-32, 1975 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-1055632

RESUMO

Addition of 1 muM methotrexate to cultures of L5178Y cells results in an initial inhibition of thymidine, uridine, and leucine incorporation into acid-insoluble material followed, after about 10 hr, by a partial recovery in the extent of incorporation of these precursors. Acid-soluble adenosine triphosphate and guanosine triphosphate concentrations are greatly reduced initially, but guanosine triphosphate concentrations appear to recover partially by 10 hr. Acid-soluble uridine triphosphate and cytidine triphosphate concentrations initially increase after methotrexate treatment but then, with time, they too decline. Hypoxanthine and guanine are more effective than is adenine in overcoming the methotrexate-induced inhibition of thymidine incorporation. These results suggest that, in the presence of methotrexate, guanine nucleotides become limiting for nucleic acid synthesis before adenine nucleotides do. The block of purine de novo synthesis in L5178Y cells by methotrexate is almost complete and is not reversed with time. This suggests that the additional purine nucleotides that are available for nucleic acid synthesis 8 to 10 hr after addition of methotrexate are being derived from nucleic acid breakdown. Consistent with this is the observed reduction in the number of polyribosomes and hence, presumably in messenger RNA levels.


Assuntos
Metotrexato/farmacologia , Purinas/biossíntese , Adenina/farmacologia , Trifosfato de Adenosina/biossíntese , Animais , Linhagem Celular , Nucleotídeos de Citosina/biossíntese , DNA/biossíntese , Depressão Química , Guanina/farmacologia , Guanosina Trifosfato/biossíntese , Hipoxantinas/farmacologia , Leucina/metabolismo , Leucemia Linfoide/metabolismo , Camundongos , RNA/biossíntese , Timidina/metabolismo , Fatores de Tempo , Nucleotídeos de Uracila/biossíntese , Uridina/metabolismo
20.
Cancer Res ; 51(9): 2291-5, 1991 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-1707749

RESUMO

(6R)-5,10-Dideaza-5,6,7,8-tetrahydrofolic acid [(6R)DDATHF] is a folate antimetabolite with activity specifically directed against de novo purine synthesis, primarily through inhibition of glycinamide ribonucleotide transformylase. This inhibition resulted in major changes in the size of the nucleotide pools in CCRF-CEM cells. After a 4-h incubation with 1 microM (6R)DDATHF, dramatic reductions in the ATP and GTP pools were observed, with almost no effect on CTP, UTP, and deoxyribonucleotide pools. When the incubation was continued in drug-free medium, recovery of ATP and GTP pools was protracted. ATP did not return to normal until 24-36 h, and GTP pools were only partially repleted by 48 h. The ATP and GTP pools were not affected when the initial 4-h incubation with (6R)DDATHF was conducted in the presence of 100 microM hypoxanthine. Addition of hypoxanthine to the medium after a 4-h incubation with (6R)DDATHF caused rapid recovery of the ATP and GTP pools. Similar effects were seen when the purine precursor aminoimidazole carboxamide was used in place of hypoxanthine. The effect of (6R)DDATHF on nucleotide pools and the capability of hypoxanthine or aminoimidazole carboxamide to prevent or reverse this phenomenon correlated directly with the inhibition of cell growth. Presumably as a consequence of the decrease in purine nucleotide triphosphate levels, the conversion of exogenously added uridine, thymidine, and deoxyuridine to nucleotides was markedly decreased. These effects were protracted for almost 48 h and were also reversed by hypoxanthine. Differential repletion of ATP and GTP pools after (6R)DDATHF pre-treatment demonstrated that diminished precursor phosphorylation is primarily a consequence of GTP rather than ATP starvation.


Assuntos
Trifosfato de Adenosina/biossíntese , Antagonistas do Ácido Fólico/farmacologia , Guanosina Trifosfato/biossíntese , Leucemia-Linfoma de Células T do Adulto/metabolismo , Tetra-Hidrofolatos/farmacologia , Aminoimidazol Carboxamida/farmacologia , Citidina Trifosfato/biossíntese , DNA/biossíntese , Humanos , Hipoxantina , Hipoxantinas/farmacologia , RNA/biossíntese , Timidilato Sintase/metabolismo , Fatores de Tempo , Células Tumorais Cultivadas/metabolismo , Uridina Trifosfato/biossíntese
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