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VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases.
Giraldo-Calderón, Gloria I; Emrich, Scott J; MacCallum, Robert M; Maslen, Gareth; Dialynas, Emmanuel; Topalis, Pantelis; Ho, Nicholas; Gesing, Sandra; Madey, Gregory; Collins, Frank H; Lawson, Daniel.
Afiliação
  • Giraldo-Calderón GI; Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556, USA.
  • Emrich SJ; Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA ECK Institute for Global Health, University of Notre Dame, Notre Dame, IN 46556, USA semrich@nd.edu.
  • MacCallum RM; Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
  • Maslen G; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
  • Dialynas E; Institute of Molecular Biology and Biotechnology (IMBB), FORTH, Vassilika Vouton,Nikolaou Plastira 100, 70013 Heraklion, Crete, Greece.
  • Topalis P; Institute of Molecular Biology and Biotechnology (IMBB), FORTH, Vassilika Vouton,Nikolaou Plastira 100, 70013 Heraklion, Crete, Greece.
  • Ho N; Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
  • Gesing S; Center for Research Computing, University of Notre Dame, Notre Dame, IN 46556, USA.
  • Madey G; Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA ECK Institute for Global Health, University of Notre Dame, Notre Dame, IN 46556, USA.
  • Collins FH; Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556, USA ECK Institute for Global Health, University of Notre Dame, Notre Dame, IN 46556, USA.
  • Lawson D; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK lawson@ebi.ac.uk.
Nucleic Acids Res ; 43(Database issue): D707-13, 2015 Jan.
Article em En | MEDLINE | ID: mdl-25510499
VectorBase is a National Institute of Allergy and Infectious Diseases supported Bioinformatics Resource Center (BRC) for invertebrate vectors of human pathogens. Now in its 11th year, VectorBase currently hosts the genomes of 35 organisms including a number of non-vectors for comparative analysis. Hosted data range from genome assemblies with annotated gene features, transcript and protein expression data to population genetics including variation and insecticide-resistance phenotypes. Here we describe improvements to our resource and the set of tools available for interrogating and accessing BRC data including the integration of Web Apollo to facilitate community annotation and providing Galaxy to support user-based workflows. VectorBase also actively supports our community through hands-on workshops and online tutorials. All information and data are freely available from our website at https://www.vectorbase.org/.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genômica / Bases de Dados Genéticas / Vetores de Doenças Limite: Animals / Humans Idioma: En Revista: Nucleic Acids Res Ano de publicação: 2015 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genômica / Bases de Dados Genéticas / Vetores de Doenças Limite: Animals / Humans Idioma: En Revista: Nucleic Acids Res Ano de publicação: 2015 Tipo de documento: Article País de afiliação: Estados Unidos