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A constrained singular value decomposition method that integrates sparsity and orthogonality.
Guillemot, Vincent; Beaton, Derek; Gloaguen, Arnaud; Löfstedt, Tommy; Levine, Brian; Raymond, Nicolas; Tenenhaus, Arthur; Abdi, Hervé.
Afiliação
  • Guillemot V; Bioinformatics and Biostatistics Hub, Institut Pasteur, Paris, France.
  • Beaton D; The Rotman Research Institute Institution at Baycrest, Toronto, ON, Canada.
  • Gloaguen A; L2S, UMR CNRS 8506, CNRS-CentraleSupélec-Université Paris-Sud, Université Paris-Saclay, 3 rue Joliot-Curie, 91192 Gif-sur-Yvette, France.
  • Löfstedt T; Department of Radiation Sciences, Umeå University, Umeå, Sweden.
  • Levine B; The Rotman Research Institute Institution at Baycrest, Toronto, ON, Canada.
  • Raymond N; IRMAR, UMR 6625, Université de Rennes, Rennes, France.
  • Tenenhaus A; L2S, UMR CNRS 8506, CNRS-CentraleSupélec-Université Paris-Sud, Université Paris-Saclay, 3 rue Joliot-Curie, 91192 Gif-sur-Yvette, France.
  • Abdi H; School of Behavioral and Brain Sciences, The University of Texas at Dallas, Richardson, TX, United States of America.
PLoS One ; 14(3): e0211463, 2019.
Article em En | MEDLINE | ID: mdl-30865639
ABSTRACT
We propose a new sparsification method for the singular value decomposition-called the constrained singular value decomposition (CSVD)-that can incorporate multiple constraints such as sparsification and orthogonality for the left and right singular vectors. The CSVD can combine different constraints because it implements each constraint as a projection onto a convex set, and because it integrates these constraints as projections onto the intersection of multiple convex sets. We show that, with appropriate sparsification constants, the algorithm is guaranteed to converge to a stable point. We also propose and analyze the convergence of an efficient algorithm for the specific case of the projection onto the balls defined by the norms L1 and L2. We illustrate the CSVD and compare it to the standard singular value decomposition and to a non-orthogonal related sparsification method with 1) a simulated example, 2) a small set of face images (corresponding to a configuration with a number of variables much larger than the number of observations), and 3) a psychometric application with a large number of observations and a small number of variables. The companion R-package, csvd, that implements the algorithms described in this paper, along with reproducible examples, are available for download from https//github.com/vguillemot/csvd.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Algoritmos / Interpretação Estatística de Dados Tipo de estudo: Prognostic_studies / Risk_factors_studies Limite: Female / Humans / Male Idioma: En Revista: PLoS One Assunto da revista: CIENCIA / MEDICINA Ano de publicação: 2019 Tipo de documento: Article País de afiliação: França

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Algoritmos / Interpretação Estatística de Dados Tipo de estudo: Prognostic_studies / Risk_factors_studies Limite: Female / Humans / Male Idioma: En Revista: PLoS One Assunto da revista: CIENCIA / MEDICINA Ano de publicação: 2019 Tipo de documento: Article País de afiliação: França