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Bacnet: a user-friendly platform for building multi-omics websites.
Danès, Loane; Tchitchek, Nicolas; Bécavin, Christophe.
Afiliação
  • Danès L; Hub de Bioinformatique et Biostatistique - Centre de Bioinformatique, Biostatistique et Biologie Intégrative, CNRS USR 3756 Institut Pasteur, Paris F-75015, France.
  • Tchitchek N; Sorbonne Université, INSERM, UMRS 959, Immunology-Immunopathology-Immunotherapy (i3), Paris F-75005, France.
  • Bécavin C; Hub de Bioinformatique et Biostatistique - Centre de Bioinformatique, Biostatistique et Biologie Intégrative, CNRS USR 3756 Institut Pasteur, Paris F-75015, France.
Bioinformatics ; 37(9): 1335-1336, 2021 06 09.
Article em En | MEDLINE | ID: mdl-32966562
ABSTRACT

SUMMARY:

To face up to the exponential growth of heterogeneous datasets of various organisms, we developed a user-friendly platform for building multi-omics websites, which is named Bacnet. This platform helps bioinformaticians to construct four key web interfaces (i) an interactive genome viewer; (ii) an expression and protein atlas; (iii) an interface for analysis of co-expression network; (iv) an interface for exploring homolog presence. We believe our platform will help the bioinformaticians to construct personalized user interfaces dedicated to biologists studying non-reference organisms. AVAILABILITY AND IMPLEMENTATION https//github.com/becavin-lab/bacnet; Java; Eclipse RAP; Eclipse RCP.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Software / Biologia Computacional Idioma: En Revista: Bioinformatics Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: França

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Software / Biologia Computacional Idioma: En Revista: Bioinformatics Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: França