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Metagenomic insights into the plasma virome of Brazilian patients with prostate cancer.
Luciola Zanette, Dalila; Andrade Coelho, Karoline Brito Caetano; de Carvalho, Eneas; Aoki, Mateus Nobrega; Nardin, Jeanine Marie; Araújo Lalli, Larissa; Dos Santos Bezerra, Rafael; Giovanetti, Marta; Simionatto Zucherato, Victória; Montenegro de Campos, Gabriel; de Souza Todão Bernardino, Jardelina; Louis Viala, Vincent; Ciccozzi, Massimo; Junior Alcantara, Luiz Carlos; Coccuzzo Sampaio, Sandra; Elias, Maria Carolina; Kashima, Simone; Tadeu Covas, Dimas; Nanev Slavov, Svetoslav.
Afiliação
  • Luciola Zanette D; Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (FIOCRUZ), Professor Algacyr Munhoz Mader, Curitiba, Parana, Brazil.
  • Andrade Coelho KBC; Department of Anatomy and Surgery, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirao Preto, Sao Paulo, Brazil.
  • de Carvalho E; Butantan Institute, São Paulo, São Paulo, Brazil.
  • Aoki MN; Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (FIOCRUZ), Professor Algacyr Munhoz Mader, Curitiba, Parana, Brazil.
  • Nardin JM; Department of Urology, Erasto Gaertner Hospital, Curitiba, Parana, Brazil.
  • Araújo Lalli L; Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (FIOCRUZ), Professor Algacyr Munhoz Mader, Curitiba, Parana, Brazil.
  • Dos Santos Bezerra R; Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.
  • Giovanetti M; Department of Science and Technology for Humans and the Environment, University of Campus Bio-Medico di Roma, Rome, Italy.
  • Simionatto Zucherato V; Laboratory of Flaviviruses, Oswaldo Cruz Foundation, Rio de Janeiro, Rio de Janeiro, Brazil.
  • Montenegro de Campos G; Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.
  • de Souza Todão Bernardino J; Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.
  • Louis Viala V; Butantan Institute, São Paulo, São Paulo, Brazil.
  • Ciccozzi M; Butantan Institute, São Paulo, São Paulo, Brazil.
  • Junior Alcantara LC; Epidemiology and Statistic Unit, University of Campus Bio-Medico di Roma, Rome, Italy.
  • Coccuzzo Sampaio S; Laboratory of Flaviviruses, Oswaldo Cruz Foundation, Rio de Janeiro, Rio de Janeiro, Brazil.
  • Elias MC; Butantan Institute, São Paulo, São Paulo, Brazil.
  • Kashima S; Butantan Institute, São Paulo, São Paulo, Brazil.
  • Tadeu Covas D; Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.
  • Nanev Slavov S; Butantan Institute, São Paulo, São Paulo, Brazil.
Mol Cell Oncol ; 10(1): 2188858, 2023.
Article em En | MEDLINE | ID: mdl-36950183
ABSTRACT
Growing evidence suggests that metavirome changes could be associated increased risk for malignant cell transformation. Considering Viruses have been proposed as factors for prostate cancer induction. The objective of this study was to examine the composition of the plasma metavirome of patients with prostate cancer. Blood samples were obtained from 49 male patients with primary prostate adenocarcinoma. Thirty blood donors were included as a control group. The obtained next-generation sequencing data were analyzed using a bioinformatic pipeline for virus metagenomics. Viral reads with higher abundance were assembled in contigs and analyzed taxonomically. Viral agents of interest were also confirmed by qPCR. Anelloviruses and the Human Pegivirus-1 (HPgV-1) were the most abundant component of plasma metavirome. Clinically important viruses like hepatitis C virus (HCV), cytomegalovirus and human adenovirus type C were also identified. In comparison, the blood donor virome was exclusively composed of torque teno virus types (TTV) types. The performed HPgV-1 and HCV phylogeny revealed that these viruses belong to commonly detected in Brazil genotypes. Our study sheds light on the plasma viral abundance in patients with prostatic cancer. The obtained viral diversity allowed us to separate the patients and controls, probably suggesting that malignant processes may influence virome composition. More complex and multiple approach investigations are necessary to examine the likely causal relationship between metavirome and its nvolvement in prostate cancer.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies País/Região como assunto: America do sul / Brasil Idioma: En Revista: Mol Cell Oncol Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Brasil

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies País/Região como assunto: America do sul / Brasil Idioma: En Revista: Mol Cell Oncol Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Brasil