DDBJ update in 2023: the MetaboBank for metabolomics data and associated metadata.
Nucleic Acids Res
; 52(D1): D67-D71, 2024 Jan 05.
Article
em En
| MEDLINE
| ID: mdl-37971299
ABSTRACT
The Bioinformation and DNA Data Bank of Japan (DDBJ) Center (https//www.ddbj.nig.ac.jp) provides database archives that cover a wide range of fields in life sciences. As a founding member of the International Nucleotide Sequence Database Collaboration (INSDC), DDBJ accepts and distributes nucleotide sequence data as well as their study and sample information along with the National Center for Biotechnology Information in the United States and the European Bioinformatics Institute (EBI). Besides INSDC databases, the DDBJ Center provides databases for functional genomics (GEA Genomic Expression Archive), metabolomics (MetaboBank) and human genetic and phenotypic data (JGA Japanese Genotype-phenotype Archive). These database systems have been built on the National Institute of Genetics (NIG) supercomputer, which is also open for domestic life science researchers to analyze large-scale sequence data. This paper reports recent updates on the archival databases and the services of the DDBJ Center, highlighting the newly redesigned MetaboBank. MetaboBank uses BioProject and BioSample in its metadata description making it suitable for multi-omics large studies. Its collaboration with MetaboLights at EBI brings synergy in locating and reusing public data.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Bases de Dados de Ácidos Nucleicos
/
Metabolômica
/
Metadados
Limite:
Humans
País/Região como assunto:
Asia
Idioma:
En
Revista:
Nucleic Acids Res
Ano de publicação:
2024
Tipo de documento:
Article
País de afiliação:
Japão