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Interaction modes of human orexin 2 receptor with selective and nonselective antagonists studied by NMR spectroscopy.
Imamura, Kayo; Akagi, Ken-Ichi; Miyanoiri, Yohei; Tsujimoto, Hirokazu; Hirokawa, Takatsugu; Ashida, Hideo; Murakami, Kaori; Inoue, Asuka; Suno, Ryoji; Ikegami, Takahisa; Sekiyama, Naotaka; Iwata, So; Kobayashi, Takuya; Tochio, Hidehito.
Afiliação
  • Imamura K; Department of Biophysics, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
  • Akagi KI; Section of Laboratory Equipment, National Institute of Biomedical Innovation, Health, and Nutrition, Osaka 567-0085, Japan.
  • Miyanoiri Y; Institute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan.
  • Tsujimoto H; Department of Cell Biology and Medical Chemistry, Graduate School of Medicine, Kyoto University, Kyoto 606-8501, Japan.
  • Hirokawa T; Division of Biomedical Science, Faculty of Medicine, University of Tsukuba, Tsukuba 305-8575, Japan; Transborder Medical Research Center, University of Tsukuba, Tsukuba 305-8575, Japan.
  • Ashida H; Department of Biophysics, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
  • Murakami K; Department of Biophysics, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
  • Inoue A; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, Miyagi 980-8578, Japan.
  • Suno R; Department of Medical Chemistry, Kansai Medical University, Hirakata 573-1010, Japan.
  • Ikegami T; Graduate School of Medical Life Science, Yokohama City University, 1-7-29 Suehiro, Yokohama, Kanagawa 230-0045, Japan.
  • Sekiyama N; Department of Biophysics, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
  • Iwata S; Department of Cell Biology and Medical Chemistry, Graduate School of Medicine, Kyoto University, Kyoto 606-8501, Japan.
  • Kobayashi T; Department of Medical Chemistry, Kansai Medical University, Hirakata 573-1010, Japan.
  • Tochio H; Department of Biophysics, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan. Electronic address: tochio@mb.biophys.kyoto-u.ac.jp.
Structure ; 32(3): 352-361.e5, 2024 Mar 07.
Article em En | MEDLINE | ID: mdl-38194963
ABSTRACT
Orexin neuropeptides have many physiological roles in the sleep-wake cycle, feeding behavior, reward demands, and stress responses by activating cognitive receptors, the orexin receptors (OX1R and OX2R), distributed in the brain. There are only subtle differences between OX1R and OX2R in the orthosteric site, which has hindered the rational development of subtype-selective antagonists. In this study, we utilized solution-state NMR to capture the structural plasticity of OX2R labeled with 13CH3-ε-methionine in complex with antagonists. Mutations in the orthosteric site allosterically affected the intracellular tip of TM6. Ligand exchange experiments with the subtype-selective EMPA and the nonselective suvorexant identified three methionine residues that were substantially perturbed. The NMR spectra suggested that the suvorexant-bound state exhibited more structural plasticity than the EMPA-bound state, which has not been foreseen from the close similarity of their crystal structures, providing insights into dynamic features to be considered in understanding the ligand recognition mode.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Metionina Limite: Humans Idioma: En Revista: Structure Assunto da revista: BIOLOGIA MOLECULAR / BIOQUIMICA / BIOTECNOLOGIA Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Japão

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Metionina Limite: Humans Idioma: En Revista: Structure Assunto da revista: BIOLOGIA MOLECULAR / BIOQUIMICA / BIOTECNOLOGIA Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Japão