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1.

The Splicing Code Goes Deep.

Bao, Suying; Moakley, Daniel F; Zhang, Chaolin.

Cell; 176(3): 414-416, 2019 01 24.

Artículo en Inglés | MEDLINE | ID: mdl-30682368

2.

A deep catalogue of protein-coding variation in 983,578 individuals.

Sun, Kathie Y; Bai, Xiaodong; Chen, Siying; Bao, Suying; Zhang, Chuanyi; Kapoor, Manav; Backman, Joshua; Joseph, Tyler; Maxwell, Evan; Mitra, George; Gorovits, Alexander; Mansfield, Adam; Boutkov, Boris; Gokhale, Sujit; Habegger, Lukas; Marcketta, Anthony; Locke, Adam E; Ganel, Liron; Hawes, Alicia; Kessler, Michael D; Sharma, Deepika; Staples, Jeffrey; Bovijn, Jonas; Gelfman, Sahar; Di Gioia, Alessandro; Rajagopal, Veera M; Lopez, Alexander; Varela, Jennifer Rico; Alegre, Jesus; Berumen, Jaime; Tapia-Conyer, Roberto; Kuri-Morales, Pablo; Torres, Jason; Emberson, Jonathan; Collins, Rory; Cantor, Michael; Thornton, Timothy; Kang, Hyun Min; Overton, John D; Shuldiner, Alan R; Cremona, M Laura; Nafde, Mona; Baras, Aris; Abecasis, Goncalo; Marchini, Jonathan; Reid, Jeffrey G; Salerno, William; Balasubramanian, Suganthi.

Nature; 2024 May 20.

Artículo en Inglés | MEDLINE | ID: mdl-38768635

3.

Modeling RNA-Binding Protein Specificity In Vivo by Precisely Registering Protein-RNA Crosslink Sites.

Feng, Huijuan; Bao, Suying; Rahman, Mohammad Alinoor; Weyn-Vanhentenryck, Sebastien M; Khan, Aziz; Wong, Justin; Shah, Ankeeta; Flynn, Elise D; Krainer, Adrian R; Zhang, Chaolin.

Mol Cell; 74(6): 1189-1204.e6, 2019 06 20.

Artículo en Inglés | MEDLINE | ID: mdl-31226278

4.

Integrated analysis of mRNA-seq and miRNA-seq for host susceptibilities to influenza A (H7N9) infection in inbred mouse lines.

Bao, Suying; Jia, Lilong; Zhou, Xueya; Zhang, Zhi-Gang; Wu, Hazel Wai Lan; Yu, Zhe; Ng, Gordon; Fan, Yanhui; Wong, Dana S M; Huang, Shishu; Wang To, Kelvin Kai; Yuen, Kwok-Yung; Yeung, Man Lung; Song, You-Qiang.

Funct Integr Genomics; 18(4): 411-424, 2018 Jul.

Artículo en Inglés | MEDLINE | ID: mdl-29564647

5.

Predicting mendelian disease-causing non-synonymous single nucleotide variants in exome sequencing studies.

Li, Miao-Xin; Kwan, Johnny S H; Bao, Su-Ying; Yang, Wanling; Ho, Shu-Leong; Song, Yong-Qiang; Sham, Pak C.

PLoS Genet; 9(1): e1003143, 2013.

Artículo en Inglés | MEDLINE | ID: mdl-23341771

6.

A comprehensive framework for prioritizing variants in exome sequencing studies of Mendelian diseases.

Li, Miao-Xin; Gui, Hong-Sheng; Kwan, Johnny S H; Bao, Su-Ying; Sham, Pak C.

Nucleic Acids Res; 40(7): e53, 2012 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-22241780

7.

Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences.

Xu, Chencheng; Bao, Suying; Chen, Hao; Jiang, Tao; Zhang, Chaolin.

bioRxiv; 2024 Apr 08.

Artículo en Inglés | MEDLINE | ID: mdl-38586002

8.

Lineage-specific splicing regulation of MAPT gene in the primate brain.

Recinos, Yocelyn; Bao, Suying; Wang, Xiaojian; Phillips, Brittany L; Yeh, Yow-Tyng; Weyn-Vanhentenryck, Sebastien M; Swanson, Maurice S; Zhang, Chaolin.

Cell Genom; : 100563, 2024 May 13.

Artículo en Inglés | MEDLINE | ID: mdl-38772368

9.

Prioritizing genes responsible for host resistance to influenza using network approaches.

Bao, Suying; Zhou, Xueya; Zhang, Liangcai; Zhou, Jie; To, Kelvin Kai-Wang; Wang, Binbin; Wang, Liqiu; Zhang, Xuegong; Song, You-Qiang.

BMC Genomics; 14: 816, 2013 Nov 21.

Artículo en Inglés | MEDLINE | ID: mdl-24261899

10.

Systematic dissection of coordinated stromal remodeling identifies Sox10⁺ glial cells as a therapeutic target in myelofibrosis.

Sarkaria, Shawn M; Zhou, Junsong; Bao, Suying; Zhao, Wenqi; Fang, Yinshan; Que, Jianwen; Bhagat, Govind; Zhang, Chaolin; Ding, Lei.

Cell Stem Cell; 30(6): 832-850.e6, 2023 06 01.

Artículo en Inglés | MEDLINE | ID: mdl-37267917

11.

Rare coding variants in CHRNB2 reduce the likelihood of smoking.

Rajagopal, Veera M; Watanabe, Kyoko; Mbatchou, Joelle; Ayer, Ariane; Quon, Peter; Sharma, Deepika; Kessler, Michael D; Praveen, Kavita; Gelfman, Sahar; Parikshak, Neelroop; Otto, Jacqueline M; Bao, Suying; Chim, Shek Man; Pavlopoulos, Elias; Avbersek, Andreja; Kapoor, Manav; Chen, Esteban; Jones, Marcus B; Leblanc, Michelle; Emberson, Jonathan; Collins, Rory; Torres, Jason; Morales, Pablo Kuri; Tapia-Conyer, Roberto; Alegre, Jesus; Berumen, Jaime; Shuldiner, Alan R; Balasubramanian, Suganthi; Abecasis, Gonçalo R; Kang, Hyun M; Marchini, Jonathan; Stahl, Eli A; Jorgenson, Eric; Sanchez, Robert; Liedtke, Wolfgang; Anderson, Matthew; Cantor, Michael; Lederer, David; Baras, Aris; Coppola, Giovanni.

Nat Genet; 55(7): 1138-1148, 2023 07.

Artículo en Inglés | MEDLINE | ID: mdl-37308787

12.

A deep catalog of protein-coding variation in 985,830 individuals.

Sun, Kathie Y; Bai, Xiaodong; Chen, Siying; Bao, Suying; Kapoor, Manav; Zhang, Chuanyi; Backman, Joshua; Joseph, Tyler; Maxwell, Evan; Mitra, George; Gorovits, Alexander; Mansfield, Adam; Boutkov, Boris; Gokhale, Sujit; Habegger, Lukas; Marcketta, Anthony; Locke, Adam; Kessler, Michael D; Sharma, Deepika; Staples, Jeffrey; Bovijn, Jonas; Gelfman, Sahar; Gioia, Alessandro Di; Rajagopal, Veera; Lopez, Alexander; Varela, Jennifer Rico; Alegre, Jesus; Berumen, Jaime; Tapia-Conyer, Roberto; Kuri-Morales, Pablo; Torres, Jason; Emberson, Jonathan; Collins, Rory; Cantor, Michael; Thornton, Timothy; Kang, Hyun Min; Overton, John; Shuldiner, Alan R; Cremona, M Laura; Nafde, Mona; Baras, Aris; Abecasis, Goncalo; Marchini, Jonathan; Reid, Jeffrey G; Salerno, William; Balasubramanian, Suganthi.

bioRxiv; 2023 Nov 02.

Artículo en Inglés | MEDLINE | ID: mdl-37214792

13.

WITHDRAWN: Evaluation of next-generation sequencing software in mapping and assembly.

Bao, Suying; Jiang, Rui; Kwan, Wingkeung; Wang, Binbin; Ma, Xu; Song, You-Qiang.

J Hum Genet; 2011 Jun 16.

Artículo en Inglés | MEDLINE | ID: mdl-21677664

14.

Evaluation of next-generation sequencing software in mapping and assembly.

Bao, Suying; Jiang, Rui; Kwan, WingKeung; Wang, BinBin; Ma, Xu; Song, You-Qiang.

J Hum Genet; 56(6): 406-14, 2011 Jun.

Artículo en Inglés | MEDLINE | ID: mdl-21525877

15.

A graph model based study on regulatory impacts of transcription factors of Drosophila melanogaster and comparison across species.

Tian, Feng; Chen, Jia; Bao, Suying; Shi, Lin; Liu, Xiangjun; Grossman, Robert.

Biochem Biophys Res Commun; 386(4): 559-62, 2009 Sep 04.

Artículo en Inglés | MEDLINE | ID: mdl-19538943

16.

Stage-specific requirement for Mettl3-dependent m⁶A mRNA methylation during haematopoietic stem cell differentiation.

Lee, Heather; Bao, Suying; Qian, Yingzhi; Geula, Shay; Leslie, Juliana; Zhang, Chaolin; Hanna, Jacob H; Ding, Lei.

Nat Cell Biol; 21(6): 700-709, 2019 06.

Artículo en Inglés | MEDLINE | ID: mdl-31061465

17.

Mutations in Hnrnpa1 cause congenital heart defects.

Yu, Zhe; Tang, Paul Lf; Wang, Jing; Bao, Suying; Shieh, Joseph T; Leung, Alan Wl; Zhang, Zhao; Gao, Fei; Wong, Sandra Yy; Hui, Andy Lc; Gao, Yuan; Dung, Nelson; Zhang, Zhi-Gang; Fan, Yanhui; Zhou, Xueya; Zhang, Yalun; Wong, Dana Sm; Sham, Pak C; Azhar, Abid; Kwok, Pui-Yan; Tam, Patrick Pl; Lian, Qizhou; Cheah, Kathryn Se; Wang, Binbin; Song, You-Qiang.

JCI Insight; 3(2)2018 01 25.

Artículo en Inglés | MEDLINE | ID: mdl-29367466

18.

A rare variant in MLKL confers susceptibility to ApoE É4-negative Alzheimer's disease in Hong Kong Chinese population.

Wang, Binbin; Bao, Suying; Zhang, Zhigang; Zhou, Xueya; Wang, Jing; Fan, Yanhui; Zhang, Yan; Li, Yan; Chen, Luhua; Jia, Yizhen; Li, Jiang; Li, Miaoxin; Zheng, Wenhua; Mu, Nan; Wang, Liqiu; Yu, Zhe; Wong, Dana S M; Zhang, Yalun; Kwan, Joseph; Ka-Fung Mak, Henry; Ambalavanan, Amirthagowri; Zhou, Sirui; Cai, Wangwei; Zheng, Jin; Huang, Shishu; Rouleau, Guy A; Yang, Wanling; Rogaeva, Ekaterina; Ma, Xu; St George-Hyslop, Peter; Chu, Leung Wing; Song, You-Qiang.

Neurobiol Aging; 68: 160.e1-160.e7, 2018 08.

Artículo en Inglés | MEDLINE | ID: mdl-29656768

19.

PTPN21 exerts pro-neuronal survival and neuritic elongation via ErbB4/NRG3 signaling.

Plani-Lam, Janice Hiu-Chor; Chow, Tai-Cheong; Siu, Kam-Leung; Chau, Wing Hin; Ng, Ming-Him James; Bao, Suying; Ng, Cheung Toa; Sham, Pak; Shum, Daisy Kwok-Yan; Ingley, Evan; Jin, Dong-Yan; Song, You-Qiang.

Int J Biochem Cell Biol; 61: 53-62, 2015 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-25681686

20.

Short read mapping for exome sequencing.

Zhou, Xueya; Bao, Suying; Wang, Binbin; Zhang, Xuegong; Song, You-Qiang.

Methods Mol Biol; 1038: 93-111, 2013.

Artículo en Inglés | MEDLINE | ID: mdl-23872971

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