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1.
Bioorg Med Chem ; 87: 117311, 2023 05 03.
Artículo en Inglés | MEDLINE | ID: mdl-37182518

RESUMEN

The design, synthesis, and conformational analysis of a novel aromatic oligoester helix mimetic scaffold is reported. A range of amino acid-type side-chain functionality can be readily incorporated into monomer building blocks over three facile synthetic steps. Analysis of representative dimers revealed a stable conformer capable of effective mimicry of a canonical α-helix and the scaffold was found to be surprisingly stable to degradation in aqueous solutions at acidic and neutral pH.


Asunto(s)
Aminoácidos , Biomimética , Estructura Secundaria de Proteína
2.
Paediatr Anaesth ; 30(1): 43-49, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-31665824

RESUMEN

BACKGROUND: Preoperative fasting is performed to reduce aspiration risk during general anesthesia. Recommendations are that patients should fast for 6 hours from solids and nonhuman milk, 4 hours from breast milk, and 2 hours from clear fluids. However, previous studies have shown that children fast far in excess of these times, which can result in perioperative complications and unnecessary discomfort for the child. AIMS: This prospective, mixed-methods study aims to explore the experiences of pediatric patients undergoing preoperative fasting in Leeds General Infirmary. It also aims to investigate fasting durations of these patients and factors which influence these. METHODS: Over 2 weeks, surveys were distributed to all parents of elective pediatric patients and completed prior to their child being called to theater. Children over the age of six were offered a child survey, which had been specifically developed for the study, with visual Likert scales and an area for free text. The gathering of children's comments about their experience of preoperative fasting is unique to this study. RESULTS: Seventy-one parent surveys and 48 child surveys were completed, with a mean patient age of 8.3 years (SD 4.1). The mean preoperative fasting time for food was 11.7 hours (SD 4.4) and 6.9 hours (SD 5.0) for fluids. Fasting times were far in excess of the minimums recommended, negatively impacting patient experience with 34% reporting being hungry/very hungry and 19% thirsty/very thirsty. Most children's comments suggested that they coped well with the fasting; however, several children reported feelings of sadness and anxiety. CONCLUSION: Preoperative fasting times in pediatric patients far exceed the durations set by international guidelines. Given that many children reported extreme feelings of hunger and thirst or emotional effects from the fast, these durations need to be optimized in order to improve patient experience.


Asunto(s)
Ayuno/psicología , Periodo Preoperatorio , Adolescente , Anestesia General , Niño , Preescolar , Humanos , Padres , Estudios Prospectivos , Aspiración Respiratoria/prevención & control , Encuestas y Cuestionarios , Sed
3.
Chembiochem ; 17(8): 768-73, 2016 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-26690307

RESUMEN

α-Helix-mediated protein-protein interactions (PPIs) are important targets for small-molecule inhibition; however, generic approaches to inhibitor design are in their infancy and would benefit from QSAR analyses to rationalise the noncovalent basis of molecular recognition by designed ligands. Using a helix mimetic based on an oligoamide scaffold, we have exploited the power of a modular synthesis to access compounds that can readily be used to understand the noncovalent determinants of hDM2 recognition by this series of cell-active p53/hDM2 inhibitors.


Asunto(s)
Proteínas Proto-Oncogénicas c-mdm2/química , Relación Estructura-Actividad Cuantitativa , Proteína p53 Supresora de Tumor/química , Relación Dosis-Respuesta a Droga , Humanos , Ligandos , Modelos Moleculares , Estructura Molecular , Unión Proteica/efectos de los fármacos , Estructura Secundaria de Proteína , Proteínas Proto-Oncogénicas c-mdm2/antagonistas & inhibidores , Bibliotecas de Moléculas Pequeñas/síntesis química , Bibliotecas de Moléculas Pequeñas/química , Bibliotecas de Moléculas Pequeñas/farmacología , Relación Estructura-Actividad , Propiedades de Superficie , Proteína p53 Supresora de Tumor/antagonistas & inhibidores
4.
Org Biomol Chem ; 13(1): 258-64, 2015 Jan 07.
Artículo en Inglés | MEDLINE | ID: mdl-25408290

RESUMEN

The exploitation of multivalent ligands for the inhibition of protein-protein interactions has not yet been explored as a supramolecular design strategy. This is despite the fact that protein-protein interactions typically occur within the context of multi-protein complexes and frequently exploit avidity effects or co-operative binding interactions to achieve high affinity interactions. In this paper we describe preliminary studies on the use of a multivalent N-alkylated aromatic oligoamide helix mimetic for inhibition of p53/hDM2 and establish that protein dimerisation is promoted, rather than enhanced binding resulting from a higher effective concentration of the ligand.


Asunto(s)
Amidas/química , Amidas/farmacología , Materiales Biomiméticos/química , Materiales Biomiméticos/farmacología , Proteínas de Unión al ARN/metabolismo , Proteína p53 Supresora de Tumor/metabolismo , Alquilación , Amidas/síntesis química , Materiales Biomiméticos/síntesis química , Modelos Moleculares , Unión Proteica/efectos de los fármacos , Conformación Proteica , Proteínas de Unión al ARN/química , Proteína p53 Supresora de Tumor/química
5.
Angew Chem Int Ed Engl ; 54(10): 2960-5, 2015 Mar 02.
Artículo en Inglés | MEDLINE | ID: mdl-25651514

RESUMEN

Inhibition of protein-protein interactions (PPIs) represents a major challenge in chemical biology and drug discovery. α-Helix mediated PPIs may be amenable to modulation using generic chemotypes, termed "proteomimetics", which can be assembled in a modular manner to reproduce the vectoral presentation of key side chains found on a helical motif from one partner within the PPI. In this work, it is demonstrated that by using a library of N-alkylated aromatic oligoamide helix mimetics, potent helix mimetics which reproduce their biophysical binding selectivity in a cellular context can be identified.


Asunto(s)
Imitación Molecular , Proteínas/química , Línea Celular Tumoral , Humanos
6.
Org Biomol Chem ; 12(3): 446-55, 2014 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-24263553

RESUMEN

This article reports self-assembling dendrons which bind DNA in a multivalent manner. The molecular design directly impacts on self-assembly which subsequently controls the way these multivalent nanostructures bind DNA--this can be simulated by multiscale modelling. Incorporation of an S-S linkage between the multivalent hydrophilic dendron and the hydrophobic units responsible for self-assembly allows these structures to undergo triggered reductive cleavage, with dithiothreitol (DTT) inducing controlled breakdown, enabling the release of bound DNA. As such, the high-affinity self-assembled multivalent binding is temporary. Furthermore, because the multivalent dendrons are constructed from esters, a second slow degradation step causes further breakdown of these structures. This two-step double-degradation mechanism converts a large self-assembling unit with high affinity for DNA into small units with no measurable binding affinity--demonstrating the advantage of self-assembled multivalency (SAMul) in achieving highly responsive nanoscale binding of biological targets.


Asunto(s)
ADN/análisis , Dendrímeros/química , Nanoestructuras/química , Sitios de Unión , Dendrímeros/síntesis química , Interacciones Hidrofóbicas e Hidrofílicas , Micelas , Modelos Moleculares , Estructura Molecular , Tamaño de la Partícula , Propiedades de Superficie
7.
Org Biomol Chem ; 12(35): 6794-9, 2014 Sep 21.
Artículo en Inglés | MEDLINE | ID: mdl-25065821

RESUMEN

α-Helix mediated protein-protein interactions are of major therapeutic importance. As such, the design of inhibitors of this class of interaction is of significant interest. We present methodology to modify N-alkylated aromatic oligoamide α-helix mimetics using 'click' chemistry. The effect is shown to modulate the binding properties of a series of selective p53/hDM2 inhibitors.


Asunto(s)
Proteínas Proto-Oncogénicas c-mdm2/química , Proteína p53 Supresora de Tumor/química , Amidas/química , Biomimética , Química Clic , Humanos , Concentración 50 Inhibidora , Proteína 1 de la Secuencia de Leucemia de Células Mieloides/química , Unión Proteica , Mapeo de Interacción de Proteínas , Estructura Secundaria de Proteína , Proteómica/métodos , Proteínas Proto-Oncogénicas c-mdm2/antagonistas & inhibidores , Solventes/química , Propiedades de Superficie , Proteína p53 Supresora de Tumor/antagonistas & inhibidores , Proteína bcl-X/química
8.
J Am Chem Soc ; 135(8): 2911-4, 2013 Feb 27.
Artículo en Inglés | MEDLINE | ID: mdl-23406254

RESUMEN

We report the simple synthesis and full investigation of a novel heparin binding dye, mallard blue, an arginine-functionalized thionine. This dye binds heparin in highly competitive media, including water with high levels of competitive electrolyte, buffered aqueous solution and human serum. The dye reports on heparin levels by a significant change in its UV-vis spectroscopic profile. Molecular dynamics modeling provides detailed insight into the binding mode. Heparin binding is shown to be selective over other glycosaminoglycans, such as hyaluronic acid and chondroitin sulfate. Importantly, we demonstrate that, in the most competitive conditions, mallard blue outperforms standard dyes used for heparin sensing such as azure A.


Asunto(s)
Arginina/análogos & derivados , Colorantes/química , Heparina/química , Tiazinas/química , Arginina/química , Simulación de Dinámica Molecular , Espectrofotometría Ultravioleta
9.
Geriatrics (Basel) ; 8(1)2023 Feb 17.
Artículo en Inglés | MEDLINE | ID: mdl-36826368

RESUMEN

BACKGROUND: People living with frailty account for a significant proportion of hospital inpatients and are at increased risk of adverse events during admission. The understanding of frailty remains variable among hospital staff, and there is a need for effective frailty training across multidisciplinary teams. Simulation is known to be advantageous for improving human factor skills in multidisciplinary teams. In situ simulation can increase accessibility and promote ward team learning, but its effectiveness with respect to frailty has not been explored. METHOD: A single-centre, multi-fidelity, inter-professional in situ frailty simulation programme was developed. One-hour sessions were delivered weekly using frailty-based clinical scenarios. Mixed-method evaluation was used, with data collected pre- and post-session for comparison. RESULTS: In total, 86 multidisciplinary participants attended 19 sessions. There were significant improvements in self-efficacy rating across 10 of 12 human factor domains and in all frailty domains (p < 0.05). The common learning themes were situational awareness, communication and teamwork. Participants commented on the value of learning within ward teams and having the opportunity to debrief. CONCLUSION: In situ simulation can improve the self-efficacy of clinical and human factor skills related to frailty. The results are limited by the nature of self-reporting methods, and further studies assessing behavioural change and clinical outcomes are warranted.

10.
ACS Chem Biol ; 18(12): 2485-2494, 2023 12 15.
Artículo en Inglés | MEDLINE | ID: mdl-38098459

RESUMEN

Bacterial toxin inhibition is a promising approach to overcoming antibiotic failure. InSalmonella, knockout of the toxin Doc has been shown to significantly reduce the formation of antibiotic-tolerant persisters. Doc is a kinase that is inhibited in nontolerant cells by its cognate antitoxin, Phd. In this work, we have developed first-in-class stapled peptide antitoxin mimetics based on the Doc inhibitory sequence of Phd. After making a series of substitutions to improve bacterial uptake, we identified a lead stapled Phd peptide that is able to counteract Doc toxicity in Salmonella. This provides an exciting starting point for the further development of therapeutic peptides capable of reducing antibiotic persistence in pathogenic bacteria.


Asunto(s)
Antitoxinas , Toxinas Bacterianas , Péptidos/farmacología , Salmonella , Antibacterianos/farmacología , Proteínas Bacterianas
11.
Dis Model Mech ; 16(2)2023 02 01.
Artículo en Inglés | MEDLINE | ID: mdl-36715290

RESUMEN

Phenotypic cell-based screens are critical tools for discovering candidate drugs for development, yet identification of the cellular target and mode of action of a candidate drug is often lacking. Using an imaging-based screen, we recently discovered an N-[(4-hydroxychroman-4-yl)methyl]-sulphonamide (N-4HCS) compound, DDD01035881, that blocks male gamete formation in the malaria parasite life cycle and subsequent transmission of the parasite to the mosquito with nanomolar activity. To identify the target(s) of DDD01035881, and of the N-4HCS class of compounds more broadly, we synthesised a photoactivatable derivative, probe 2. Photoaffinity labelling of probe 2 coupled with mass spectrometry identified the 16 kDa Plasmodium falciparum parasitophorous vacuole membrane protein Pfs16 as a potential parasite target. Complementary methods including cellular thermal shift assays confirmed that the parent molecule DDD01035881 stabilised Pfs16 in lysates from activated mature gametocytes. Combined with high-resolution, fluorescence and electron microscopy data, which demonstrated that parasites inhibited with N-4HCS compounds phenocopy the targeted deletion of Pfs16 in gametocytes, these data implicate Pfs16 as a likely target of DDD01035881. This finding establishes N-4HCS compounds as being flexible and effective starting candidates from which transmission-blocking antimalarials can be developed in the future.


Asunto(s)
Malaria , Plasmodium , Animales , Masculino , Proteínas de la Membrana/metabolismo , Vacuolas/metabolismo , Sulfonamidas/farmacología , Sulfonamidas/uso terapéutico , Sulfonamidas/metabolismo
12.
Org Biomol Chem ; 10(42): 8403-9, 2012 Nov 14.
Artículo en Inglés | MEDLINE | ID: mdl-23032349

RESUMEN

The ability of self-assembling multivalent DNA-binding dendrons to interact with biological targets is modified by co-assembly with two novel low-molecular-weight cholesterol-functionalised PEG units, one based on triethylene glycol (Chol-PEG-3) and one on an octaethylene glycol (Chol-PEG-8). The addition of either PEG lipid affected the co-assembled nanostructure surface charge and size in different ways depending on the structure of the self-assembling DNA-binding dendron. Co-assembly with Chol-PEG-8 enhanced DNA binding, while Chol-PEG-3 inhibited it. Insertion of Chol-PEG-8 into the aggregates modified their ability to cross a model mucus layer, the details of which can be understood in terms of a balance between the mucoadhesivity due to the surface charge of the nanoscale aggregates and that due to the PEG groups. This study demonstrates that the interaction of nanoscale assemblies with biological systems depends on a number of different factors in a sometimes unpredictable way. Given how simply multiple building blocks can be combined by self-assembly, we conclude that self-assembled multivalent systems have great potential for optimisation to maximise their biological and clinical activity.


Asunto(s)
Colesterol/análogos & derivados , ADN/metabolismo , Dendrímeros/metabolismo , Nanoestructuras/química , Polietilenglicoles/metabolismo , Animales , Sitios de Unión , Colesterol/química , Colesterol/metabolismo , Dendrímeros/química , Mucinas/metabolismo , Moco/metabolismo , Polietilenglicoles/química , Porcinos
13.
Angew Chem Int Ed Engl ; 51(27): 6572-81, 2012 Jul 02.
Artículo en Inglés | MEDLINE | ID: mdl-22689381

RESUMEN

Multivalency is a powerful strategy for achieving high-affinity molecular recognition in biological systems. Recently, attention has begun to focus on using self-assembly rather than covalent scaffold synthesis to organize multiple ligands. This approach has a number of advantages, including ease of synthesis/assembly, tunability of nanostructure morphology and ligands, potential to incorporate multiple active units, and the responsive nature of self-assembly. We suggest that self-assembled multivalency is a strategy of fundamental importance in the design of synthetic nanosystems to intervene in biological pathways and has potential applications in nanomedicine.


Asunto(s)
ADN/metabolismo , Proteínas/metabolismo , ADN/química , Humanos , Ligandos , Micelas , Modelos Moleculares , Unión Proteica , Proteínas/química
14.
ACS Chem Biol ; 17(6): 1598-1606, 2022 06 17.
Artículo en Inglés | MEDLINE | ID: mdl-35647667

RESUMEN

In the search for novel antimicrobial therapeutics, toxin-antitoxin (TA) modules are promising yet underexplored targets for overcoming antibiotic failure. The bacterial toxin Doc has been associated with the persistence of Salmonella in macrophages, enabling its survival upon antibiotic exposure. After developing a novel method to produce the recombinant toxin, we have used antitoxin-mimicking peptides to thoroughly investigate the mechanism by which its cognate antitoxin Phd neutralizes the activity of Doc. We reveal insights into the molecular detail of the Phd-Doc relationship and discriminate antitoxin residues that stabilize the TA complex from those essential for inhibiting the activity of the toxin. Coexpression of Doc and antitoxin peptides in Salmonella was able to counteract the activity of the toxin, confirming our in vitro results with equivalent sequences. Our findings provide key principles for the development of chemical tools to study and therapeutically interrogate this important class of protein-protein interactions.


Asunto(s)
Antitoxinas , Toxinas Bacterianas , Antibacterianos , Proteínas Bacterianas/química , Toxinas Bacterianas/química , Salmonella
15.
J Am Chem Soc ; 133(50): 20288-300, 2011 Dec 21.
Artículo en Inglés | MEDLINE | ID: mdl-22040056

RESUMEN

This paper uses a combined experimental and theoretical approach to gain unique insight into gene delivery. We report the synthesis and investigation of a new family of second-generation dendrons with four triamine surface ligands capable of binding to DNA, degradable aliphatic-ester dendritic scaffolds, and hydrophobic units at their focal points. Dendron self-assembly significantly enhances DNA binding as monitored by a range of experimental methods and confirmed by multiscale modeling. Cellular uptake studies indicate that some of these dendrons are highly effective at transporting DNA into cells (ca. 10 times better than poly(ethyleneimine), PEI). However, levels of transgene expression are relatively low (ca. 10% of PEI). This indicates that these dendrons cannot navigate all of the intracellular barriers to gene delivery. The addition of chloroquine indicates that endosomal escape is not the limiting factor in this case, and it is shown, both experimentally and theoretically, that gene delivery can be correlated with the ability of the dendron assemblies to release DNA. Mass spectrometric assays demonstrate that the dendrons, as intended, do degrade under biologically relevant conditions over a period of hours. Multiscale modeling of degraded dendron structures suggests that complete dendron degradation would be required for DNA release. Importantly, in the presence of the lower pH associated with endosomes, or when bound to DNA, complete degradation of these dendrons becomes ineffective on the transfection time scale-we propose this explains the poor transfection performance of these dendrons. As such, this paper demonstrates that taking this kind of multidisciplinary approach can yield a fundamental insight into the way in which dendrons can navigate barriers to cellular uptake. Lessons learned from this work will inform future dendron design for enhanced gene delivery.


Asunto(s)
Antracenos , Técnicas de Transferencia de Gen , ADN/metabolismo , Espectrometría de Masas , Modelos Moleculares , Simulación de Dinámica Molecular , Polietileneimina/metabolismo , Transgenes
16.
Br J Hosp Med (Lond) ; 82(6): 1-8, 2021 Jun 02.
Artículo en Inglés | MEDLINE | ID: mdl-34191562

RESUMEN

Falls are a common presenting complaint, particularly in older patients, and are associated with significant morbidity. Inpatient falls also have financial implications for healthcare systems, including litigation costs. This article provides an approach to assessing a patient presenting with a fall, encompassing the cause and consequence of the event. It also highlights the need to consider both the acute and chronic factors that predispose a particular patient to fall. Chronic factors such as frailty, sarcopenia, cognitive impairment, and continence issues are often under-recognised and, as a result, not managed optimally. A comprehensive geriatric assessment is an ideal structure to identify modifiable risks. Practical interventions that can be of benefit to minimise a patient's risk of falling include a medication review, assessment of their mobility and their environment. In addition, continence review and visual assessment may be appropriate.


Asunto(s)
Fragilidad , Sarcopenia , Accidentes por Caídas/prevención & control , Anciano , Fragilidad/diagnóstico , Evaluación Geriátrica , Humanos , Pacientes Internos
17.
RSC Chem Biol ; 2(2): 387-409, 2021 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-34458791

RESUMEN

Protein-Protein interactions (PPIs) are involved in a myriad of cellular processes in all living organisms and the modulation of PPIs is already under investigation for the development of new drugs targeting cancers, autoimmune diseases and viruses. PPIs are also involved in the regulation of vital functions in bacteria and, therefore, targeting bacterial PPIs offers an attractive strategy for the development of antibiotics with novel modes of action. The latter are urgently needed to tackle multidrug-resistant and multidrug-tolerant bacteria. In this review, we describe recent developments in the modulation of PPIs in pathogenic bacteria for antibiotic development, including advanced small molecule and peptide inhibitors acting on bacterial PPIs involved in division, replication and transcription, outer membrane protein biogenesis, with an additional focus on toxin-antitoxin systems as upcoming drug targets.

18.
J Hand Surg Eur Vol ; 45(5): 488-494, 2020 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-32212888

RESUMEN

We report a single-blinded randomized controlled trial comparing acupuncture to sham (non-penetrating) needling for relief of symptoms of basal thumb joint arthritis. Seventy acupuncture naive patients with basal thumb joint arthritis were randomized to receive true acupuncture or sham needling with 35 patients in each arm. Blinded baseline and post-treatment assessments included visual analogue pain scores for different grips and movement. Function was assessed using the Nelson questionnaire. Both groups showed statistically and clinically significant improvements in pain at week one post-treatment compared with baseline, but there was no difference between the treatment groups. The pain relief was comparable with published data for some standard treatments. Acupuncture did not perform better than sham needling in this study, indicating that pain relief may have been achieved through non-specific mechanisms. Level of evidence: I.


Asunto(s)
Terapia por Acupuntura , Artritis , Articulaciones de la Mano , Artritis/terapia , Humanos , Manejo del Dolor , Pulgar , Resultado del Tratamiento
19.
J Med Chem ; 63(5): 2240-2262, 2020 03 12.
Artículo en Inglés | MEDLINE | ID: mdl-31490680

RESUMEN

Malaria is still a leading cause of mortality among children in the developing world, and despite the immense progress made in reducing the global burden, further efforts are needed if eradication is to be achieved. In this context, targeting transmission is widely recognized as a necessary intervention toward that goal. After carrying out a screen to discover new transmission-blocking agents, herein we report our medicinal chemistry efforts to study the potential of the most robust hit, DDD01035881, as a male-gamete targeted compound. We reveal key structural features for the activity of this series and identify analogues with greater potency and improved metabolic stability. We believe this study lays the groundwork for further development of this series as a transmission blocking agent.


Asunto(s)
Antimaláricos/química , Antimaláricos/farmacología , Malaria/transmisión , Plasmodium falciparum/efectos de los fármacos , Animales , Descubrimiento de Drogas , Femenino , Células Germinativas/efectos de los fármacos , Células Hep G2 , Humanos , Malaria/tratamiento farmacológico , Malaria/prevención & control , Masculino , Ratones , Plasmodium falciparum/citología , Relación Estructura-Actividad
20.
Org Biomol Chem ; 7(8): 1554-61, 2009 Apr 21.
Artículo en Inglés | MEDLINE | ID: mdl-19343241

RESUMEN

Chiral, tripodal anion hosts derived from either S-phenylalanine or S-leucine bind D-lactate enantioselectively. The nature of the host-guest interaction has been probed by solution NMR methods and by DFT calculations. The calculations suggest that the D-lactate may form an additional hydrogen bond in the host-guest complex while the L-lactate complex contains an intramolecular hydrogen bond. Anion binding is in competition with host dimerisation, as demonstrated by DOSY and (1)H NMR spectroscopy, and DFT calculations.


Asunto(s)
Ácido Láctico/metabolismo , Leucina/síntesis química , Leucina/metabolismo , Fenilalanina/síntesis química , Fenilalanina/metabolismo , Aniones/metabolismo , Sitios de Unión , Dimerización , Enlace de Hidrógeno , Ácido Láctico/análogos & derivados , Ácido Láctico/química , Leucina/química , Espectroscopía de Resonancia Magnética , Modelos Moleculares , Fenilalanina/química , Piridinas/síntesis química , Compuestos de Piridinio/síntesis química , Compuestos de Piridinio/química , Estereoisomerismo
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