Alternating chimera states in complex networks with modular structures.

Chimera, the coexistence state of synchronization and non-synchronization, widely exists in complex networks. It has a great potentially explanatory power for the unihemispheric sleep of birds and some mammals, in which the synchronizations of the hemispheres of the cerebral cortex are evolving alternately. In this study, a coupled nonlinear oscillator system with a topology of the modular complex network was constructed to simulate the left and right hemispheres of the brain. The results showed that a stable chimera, an alternating chimera, and a breathing chimera were produced when the coupling strength and connection probability of the left and right hemispheres were changed. Further, we studied the effect of noise on rich synchronous patterns and found that the alternating chimera was robust to Gaussian white noise when the strength was not very large. Finally, our study was extended to a complex network with three sub-networks, and an alternating chimera could exist in two or three sub-networks. Our research provides a deeper insight into the mechanism of brain function like unihemispheric sleep.

Transition behavior of the seizure dynamics modulated by the astrocyte inositol triphosphate noise.

Epilepsy is a neurological disorder with recurrent seizures, which convey complex dynamical characteristics including chaos and randomness. Until now, the underlying mechanism has not been fully elucidated, especially the bistable property beneath the epileptic random induction phenomena in certain conditions. Inspired by the recent finding that astrocyte GTPase-activating protein (G-protein)-coupled receptors could be involved in stochastic epileptic seizures, we proposed a neuron-astrocyte network model, incorporating the noise of the astrocytic second messenger, inositol triphosphate (IP3) that is modulated by G-protein-coupled receptor activation. Based on this model, we have statistically analyzed the transitions of epileptic seizures by performing repeatable simulation trials. Our simulation results show that the increase in the IP3 noise intensity induces depolarization-block epileptic seizures together with an increase in neuronal firing frequency, consistent with corresponding experiments. Meanwhile, the bistable states of the seizure dynamics were present under certain noise intensities, during which the neuronal firing pattern switches between regular sparse spiking and epileptic seizure states. This random presence of epileptic seizures is absent when the noise intensity continues to increase, accompanying with an increase in the epileptic depolarization block duration. The simulation results also shed light on the fact that calcium signals in astrocytes play significant roles in the pattern formations of the epileptic seizure. Our results provide a potential pathway for understanding the epileptic randomness in certain conditions.

Small-world effects in a modified epidemiological model with mutation and permanent immune mechanism.

Pandemic with mutation and permanent immune spreading in a small-world network described is studied by a modified SIR model, with consideration of mutation-immune mechanism. First, a novel mutation-immune model is proposed to modify the classical SIR model to simulate the transmission of mutable viruses that can be permanently immunized in small-world networks. Then, the influences of the size, coordination number and disorder parameter of the small-world network on the spread of the epidemic are analyzed in detail. Finally, the influences of mutation cycle and infection rate on epidemic transmission in small-world network are investigated further. The results show that the structure of the small-world network and the virus mutation cycle have an important impact on the spread of the epidemic. For viruses that can be permanently immunized, virus mutation is equivalent to making the immune cycle of human beings from infinite to finite. The dynamical behavior of the modified SIR epidemic model changes from an irregular, low-amplitude evolution at small disorder parameter to a spontaneous state of wide amplitude oscillations at large disorder parameter. Moreover, similar transition can also be found in increasing mutation cycle parameter. The maximum valid variation mutation decreases with the increase of disorder parameter and coordination number, but increase with respect to system size. In addition above, as the infection rate increases, the fraction of the infected increases and then decreases. As the mutation cycle increases, the time-average fraction of the infected and the infection rate corresponding to the maximum time-average fraction of the infected also decrease. As one conclusion, the results could give a deep understanding Pandemic with mutation and permanent immune spreading, from viewpoint of small-world network.

Modulation of Astrocytes on Mode Selection of Neuron Firing Driven by Electromagnetic Induction.

Both of astrocytes and electromagnetic induction are magnificent to modulate neuron firing by introducing feedback currents to membrane potential. An improved astro-neuron model considering both of the two factors is employed to investigate their different roles in modulation. The mixing mode, defined by combination of period bursting and depolarization blockage, characterizes the effect of astrocytes. Mixing mode and period bursting alternatively appear in parameter space with respect to the amplitude of feedback current on neuron from astrocyte modulation. However, magnetic flux obviously plays a role of neuron firing inhibition. It not only repels the mixing mode but also suppresses period bursting. The mixing mode becomes period bursting mode and even resting state when astrocytes are hyperexcitable. Abnormal activities of astrocytes are capable to induce depolarization blockage to compose the mixing mode together with bursting mode. But electromagnetic induction shows its strong ability of inhibition of neuron firing, which is also illustrated in the bifurcation diagram. Indeed, the combination of the two factors and appropriate choice of parameters show the great potential to control disorder of neuron firing like epilepsy.

Estimation of Heart Rate and Respiratory Rate from PPG Signal Using Complementary Ensemble Empirical Mode Decomposition with both Independent Component Analysis and Non-Negative Matrix Factorization.

This paper proposes a framework combining the complementary ensemble empirical mode decomposition with both the independent component analysis and the non-negative matrix factorization for estimating both the heart rate and the respiratory rate from the photoplethysmography (PPG) signal. After performing the complementary ensemble empirical mode decomposition on the PPG signal, a finite number of intrinsic mode functions are obtained. Then, these intrinsic mode functions are divided into two groups to perform the further analysis via both the independent component analysis and the non-negative matrix factorization. The surrogate cardiac signal related to the heart activity and another surrogate respiratory signal related to the respiratory activity are reconstructed to estimate the heart rate and the respiratory rate, respectively. Finally, different records of signals acquired from the Medical Information Mart for Intensive Care database downloaded from the Physionet Automated Teller Machine (ATM) data bank are employed for demonstrating the outperformance of our proposed method. The results show that our proposed method outperforms both the digital filtering approach and the conventional empirical mode decomposition based methods in terms of reconstructing both the surrogate cardiac signal and the respiratory signal from the PPG signal as well as both achieving the higher accuracy and the higher reliability for estimating both the heart rate and the respiratory rate.

[Study on the epidemic development of COVID-19 in Hubei province by a modified SEIR model].

OBJECTIVE: To establish a SEIR epidemic dynamics model that can be used to evaluate the COVID-19 epidemic, and to predict and evaluate the COVID-19 epidemic in Hubei province using the proposed model. METHODS: COVID-19 SEIR transmission dynamics model was established, which took transmission ability in latent period and tracking quarantine interventions into consideration. Based on the epidemic data of Hubei province from January 23, 2020 to February 24, 2020, the parameters of the newly established modified SEIR model were fitted. By using Euler integral algorithm to solve the modified SEIR dynamics model, the epidemic situation in Hubei province was analyzed, and the impact of prevention and control measures such as quarantine and centralized treatment on the epidemic development was discussed. RESULTS: The theoretical estimation of the epidemic situation by the modified SEIR epidemic dynamics model is in good agreement with the actual situation in Hubei province. Theoretical analysis showed that prevention and control quarantine and medical follow-up quarantine played an important inhibitory effect on the outbreak of the epidemic.The centralized treatment played a key role in the rapid decline in the number of infected people. In addition, it is suggested that individuals should improve their prevention awareness and take strict self-protection measures to curb the increase in infected people. CONCLUSIONS: The modified SEIR model is reliable in the evaluation of COVID-19 epidemic in Hubei province, which provides a theoretical reference for the decision-making of epidemic interventions.

Spike-like solitary waves in incompressible boundary layers driven by a travelling wave.

Nonlinear waves produced in an incompressible boundary layer driven by a travelling wave are investigated, with damping considered as well. As one of the typical nonlinear waves, the spike-like wave is governed by the driven-damped Benjamin-Ono equation. The wave field enters a completely irregular state beyond a critical time, increasing the amplitude of the driving wave continuously. On the other hand, the number of spikes of solitary waves increases through multiplication of the wave pattern. The wave energy grows in a sequence of sharp steps, and hysteresis loops are found in the system. The wave energy jumps to different levels with multiplication of the wave, which is described by winding number bifurcation of phase trajectories. Also, the phenomenon of multiplication and hysteresis steps is found when varying the speed of driving wave as well. Moreover, the nature of the change of wave pattern and its energy is the stability loss of the wave caused by saddle-node bifurcation.

Neuronal avalanche dynamics regulated by spike-timing-dependent plasticity under different topologies and heterogeneities.

Neuronal avalanches, a critical state of network self-organization, have been widely observed in electrophysiological records at different signal levels and spatial scales of the brain, which has significant influence on information transmission and processing in the brain. In this paper, the collective behavior of neuron firing is studied based on Leaky Integrate-and-Fire model and we induce spike-timing-dependent plasticity (STDP) to update the connection weight through competition between adjacent neurons in different network topologies. The result shows that STDP can facilitate the synchronization of the network and increase the probability of large-scale neuron avalanche obviously. Moreover, both the structure of STDP and network connection density can affect the generation of avalanche critical states, specifically, learning rate has positive correlation effect on the slope of power-law distribution and time constant has negative correction on it. However, when we the increase of heterogeneity in network, STDP can only has obvious promotion in synchrony under suitable level of heterogeneity. And we find that the process of long-term potentiation is sensitive to the adjustment of time constant and learning rate, unlike long-term depression, which is only sensitive to learning rate in heterogeneity network. It is suggested that presented results could facilitate our understanding on synchronization in various neural networks under the effect of STDP learning rules.

Chimera state in a feed-forward neuronal network.

Feed-forward effect gives rise to synchronization in neuron firing in deep layers of multiple neuronal network. But complete synchronization means the loss of encoding ability. In order to avoid the contradiction, we ask whether partial synchronization (coexistence of disordered and synchronized neuron firing emerges, also called chimera state) as a compromise strategy can achieve in the feed-forward multiple-layer network. The answer is YES. In order to manifest our argument, we design a multi-layer neuronal network in which neurons in every layer are arranged in a ring topology and neuron firing propagates within (intra-) and across (inter-) the multiply layers. Emergence of chimera state and other patterns highly depends on initial condition of neuronal network and strength of feed-forward effect. Chimera state, cluster and synchronization intra- and inter- layers are displayed by sequence through layers when initial values are elaborately chosen to guarantee emergence of chimera state in the first layer. All type of patterns except chimera state propagates down toward deeper layers in different speeds varying with strength of feed-forward effect. If chimera state already exists in every layer, feed-forward effect with strong and moderate strength spoils chimera states in deep layers and they can only survive in first few layers. When the effect is small enough, chimera states will propagate down toward deeper layers. Indeed, chimera states could exist and transit to deeper layers in a regular multiple network under very strict conditions. The results help understanding better the neuron firing propagating and encoding scheme in a feed-forward neuron network.

Astrocytic modulation on neuronal electric mode selection induced by magnetic field effect.

Astrocytes as well as electromagnetic induction have been primarily considered as main factors in regulating neuronal firing patterns in the recent decade. In this work, an improved neuron-astrocyte model in consideration of the modulation of astrocytes and the electromagnetic induction is employed to explore the extend to which both of the factors affect the firing modes of the neurons. The "alternation mode", defined as the alternative of neural normal spiking mode with the high-frequency bursting-like mode, clearly shows the functions of astrocytes on neurons. Moreover, the firing pattern of the neuron becomes more abnormal when astrocytes are hyper-excitable, the reason why the abnormal coupling of the astrocyte leads to the "alternation mode" of the neuron have been studied. In addition, the effect of electromagnetic induction manifests nonlinear characteristic towards neurons, complex firing modes of neurons are observed in the weaker field and a switching mode consists with quiescent and spiking mode appears when there is a higher stronger field. This approved model can reveal the normal or abnormal electric activities of neuron considered electromagnetic induction induced by the degree of excitability of the astrocyte. These results can provide potential understanding about the effects of astrocyte on neuronal activity when the coupling of electromagnetic field is considered.

A Temperature-Dependent Model of Shape Memory Alloys Considering Tensile-Compressive Asymmetry and the Ratcheting Effect.

Tensile-compressive asymmetry and the ratcheting effect are two significant characteristics of shape memory alloys (SMAs) during uniaxial cyclic tests, thus having received substantial attention in research. In this study, by redefining the internal variables in SMAs by considering the cyclic accumulation of residual martensite, we propose a constitutive model for SMAs to simultaneously reflect tensile-compressive asymmetry and the cyclic ratcheting effect under multiple cyclic tests. This constitutive model is temperature dependent and can be used to reasonably capture the typical features of SMAs during tensile-compressive cyclic tests, which include the pseudo-elasticity at higher temperatures as well as the shape-memory effect at lower temperatures. Moreover, the proposed model can predict the cyclic mechanical behavior of SMAs subjected to applied stresses with different peak and valley values under tension and compression. Agreement between the predictions obtained from the proposed model and the published experimental data is observed, which confirms that the proposed novel constitutive model of SMAs is feasible.

A Route to Chaotic Behavior of Single Neuron Exposed to External Electromagnetic Radiation.

Non-linear behaviors of a single neuron described by Fitzhugh-Nagumo (FHN) neuron model, with external electromagnetic radiation considered, is investigated. It is discovered that with external electromagnetic radiation in form of a cosine function, the mode selection of membrane potential occurs among periodic, quasi-periodic, and chaotic motions as increasing the frequency of external transmembrane current, which is selected as a sinusoidal function. When the frequency is small or large enough, periodic, and quasi-periodic motions are captured alternatively. Otherwise, when frequency is in interval 0.778 < ω < 2.208, chaotic motion characterizes the main behavior type. The mechanism of mode transition from quasi-periodic to chaotic motion is also observed when varying the amplitude of external electromagnetic radiation. The frequency apparently plays a more important role in determining the system behavior.