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1.
BMC Plant Biol ; 24(1): 667, 2024 Jul 13.
Artículo en Inglés | MEDLINE | ID: mdl-38997682

RESUMEN

Recent studies have exhibited a very promising role of copper nanoparticles (CuNPs) in mitigation of abiotic stresses in plants. Arbuscular mycorrhizae fungi (AMF) assisted plants to trigger their defense mechanism against abiotic stresses. Arsenic (As) is a non-essential and injurious heavy-metal contaminant. Current research work was designed to elucidate role of CuNPs (100, 200 and 300 mM) and a commercial inoculum of Glomus species (Clonex® Root Maximizer) either alone or in combination (CuNPs + Clonex) on physiology, growth, and stress alleviation mechanisms of E. sibiricus growing in As spiked soils (0, 50, and 100 mg Kg- 1 soil). Arsenic induced oxidative stress, enhanced biosynthesis of hydrogen peroxide, lipid peroxidation and methylglyoxal (MG) in E. sibiricus. Moreover, As-phytotoxicity reduced photosynthetic activities and growth of plants. Results showed that individual and combined treatments, CuNPs (100 mM) as well as soil inoculation of AMF significantly enhanced root growth and shoot growth by declining As content in root tissues and shoot tissues in As polluted soils. E. sibiricus plants treated with CuNPs (100 mM) and/or AMF alleviated As induced phytotoxicity through upregulating the activity of antioxidative enzymes such as catalase (CAT) and superoxide dismutase (SOD) besides the biosynthesis of non-enzymatic antioxidants including phytochelatin (PC) and glutathione (GSH). In brief, supplementation of CuNPs (100 mM) alone or in combination with AMF reduced As uptake and alleviated the As-phytotoxicity in E. sibiricus by inducing stress tolerance mechanism resulting in the improvement of the plant growth parameters.


Asunto(s)
Arsénico , Cobre , Elymus , Metabolómica , Micorrizas , Contaminantes del Suelo , Arsénico/metabolismo , Cobre/metabolismo , Micorrizas/fisiología , Micorrizas/efectos de los fármacos , Contaminantes del Suelo/metabolismo , Elymus/metabolismo , Elymus/efectos de los fármacos , Nanopartículas del Metal , Estrés Oxidativo/efectos de los fármacos , Raíces de Plantas/efectos de los fármacos , Raíces de Plantas/metabolismo , Raíces de Plantas/crecimiento & desarrollo , Estrés Fisiológico/efectos de los fármacos
2.
Physiol Plant ; 176(2): e14252, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38509813

RESUMEN

Recent studies have demonstrated the crucial role of Cytochrome P450 enzymes (CYPs) in the production of secondary metabolites, phytohormones and antioxidants in plants. However, their functional characterization specifically under alkaline stress remains elusive. CYP82C4 was the key gene screened from a family of wild soybean CYPs in our previous studies. The aim of this present study was to clone the Glycine soja GsCYP82C4 gene and characterize its functions in Arabidopsis and Glycine max. The results showed that the GsCYP82C4 gene displayed a high expression in different plant tissues at mature stages compared to young stages. Further, higher temporal expression of the GsCYP82C4 gene was noted at 6, 12 and 24 h time points after alkali treatment in leaves compared to roots. In addition, overexpression of GsCYP82C4 improved alkaline stress tolerance in Arabidopsis via increased root lengths and fresh biomass and strengthened the antioxidant defense system via a reduction in superoxide radicals in transgenic lines compared to wild type (WT) and atcyp82c4 mutants. Further, the expression levels of stress-related marker genes were up-regulated in GsCYP82C4 OX lines under alkali stress. The functional analysis of GsCYP82C4 overexpression in soybean displayed better hairy root growth, increased fresh weight, higher antioxidant enzyme activities and reduced lipid peroxidation rates in OX lines compared to the soybean WT (K599) line. In total, our study displayed positive roles of GsCYP82C4 overexpression in both Arabidopsis and Glycine max to alleviate alkaline stress via altering expression abundance of stress responsive genes, stronger roots, higher antioxidant enzyme activities as well as reduced rates of lipid peroxidation and superoxide radicals.


Asunto(s)
Arabidopsis , Fabaceae , Especies Reactivas de Oxígeno/metabolismo , Antioxidantes/metabolismo , Superóxidos/metabolismo , Arabidopsis/genética , Arabidopsis/metabolismo , Fabaceae/genética , Glycine max/genética , Álcalis/metabolismo , Glicina/metabolismo , Plantas Modificadas Genéticamente/genética , Regulación de la Expresión Génica de las Plantas , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Estrés Fisiológico/genética
3.
Plant Cell Rep ; 43(4): 113, 2024 Apr 04.
Artículo en Inglés | MEDLINE | ID: mdl-38573519

RESUMEN

KEY MESSAGE: Selenium nanoparticles reduce cadmium absorption in tomato roots, mitigating heavy metal effects. SeNPs can efficiently help to enhance growth, yield, and biomolecule markers in cadmium-stressed tomato plants. In the present study, the effects of selenium nanoparticles (SeNPs) were investigated on the tomato plants grown in cadmium-contaminated soil. Nanoparticles were synthesized using water extract of Nigella sativa and were characterized for their size and shape. Two application methods (foliar spray and soil drench) with nanoparticle concentrations of 0, 100, and 300 mg/L were used to observe their effects on cadmium-stressed plants. Growth, yield, biochemical, and stress parameters were studied. Results showed that SeNPs positively affected plant growth, mitigating the negative effects of cadmium stress. Shoot length (SL), root length (RL), number of branches (NB), number of leaves per plant (NL), and leaf area (LA) were significantly reduced by cadmium stress but enhanced by 45, 51, 506, 208, and 82%, respectively, by soil drench treatment of SeNPs. Similarly, SeNPs increased the fruit yield (> 100%) and fruit weight (> 100%), and decreased the days to fruit initiation in tomato plants. Pigments were also positively affected by the SeNPs, particularly in foliar treatment. Lycopene content was also enhanced by the addition of NPs (75%). Furthermore, the addition of SeNPs improved the ascorbic acid, protein, phenolic, flavonoid, and proline contents of the tomato plants under cadmium stress, whereas stress enzymes also showed enhanced activities under cadmium stress. It is concluded from the present study that the addition of selenium nanoparticles enhanced the growth and yield of Cd-stressed plants by reducing the absorption of cadmium and increasing the stress management of plants.


Asunto(s)
Nanopartículas , Selenio , Solanum lycopersicum , Selenio/farmacología , Cadmio/toxicidad , Suelo
4.
Molecules ; 29(4)2024 Feb 07.
Artículo en Inglés | MEDLINE | ID: mdl-38398517

RESUMEN

Obesity is a source of significant pathologies and deadly diseases, including heart disease, diabetes, and cancer. One of the most intriguing strategies in the hunt for new anti-obesity medications is the inhibition of pancreatic lipase (PL). This study presents a novel application of short α and ß-mixed peptides as pancreatic lipase inhibitors. These peptides were synthesized in the solution phase and characterized using FTIR and 1H-NMR. L-proline is present in a high percentage of natural anti-lipase peptides and was used as a ß-amino acid in this study to enhance anti-lipase activity and proteolytic stability. Moreover, L-α-proline was converted to ß-amino acid derivatives using the Arndt-Eistert method with the advantage of stereo control at the α-carbon. The synthesized peptides with anti-lipase activity are N-Boc-ß-Pro-Gly-OBz (93%), N-Boc-O-Bz-Tyr-ß-Pro-ß-Pro-Gly-OBz (92%), N-Boc-O-Bz-Tyr-ß-Pro-COOH (91%), N-Boc-Phe-ß-Pro-OCH3 (90%), and N-Boc-O-Bz-Tyr-ß-Pro-OCH3 (89%). These peptides may function as lead molecules for further modification to more significant molecules, which can help control obesity.


Asunto(s)
Péptidos , Prolina , Humanos , Péptidos/farmacología , Péptidos/química , Aminoácidos , Lipasa , Obesidad
5.
J Biol Phys ; 49(1): 29-48, 2023 03.
Artículo en Inglés | MEDLINE | ID: mdl-36662317

RESUMEN

Myricetin (MYR) is a bioactive secondary metabolite found in plants that is recognized for its nutraceutical value and is an essential constituent of various foods and beverages. It is reported to exhibit a plethora of activities, including antioxidant, antimicrobial, antidiabetic, anticancer, and anti-inflammatory. Alpha-2-macroglobulin (α2M) is a major plasma anti-proteinase that can inhibit proteinases of both human and non-human origin, regardless of their specificity and catalytic mechanism. Here, we explored the interaction of MYR-α2M using various biochemical and biophysical techniques. It was found that the interaction of MYR brings subtle change in its anti-proteolytic potential and thereby alters its structure and function, as can be seen from absorbance and fluorescence spectroscopy. UV spectroscopy of α2M in presence of MYR indicated the occurrence of hyperchromism, suggesting complex formation. Fluorescence spectroscopy reveals that MYR reduces the fluorescence intensity of native α2M with a shift in the wavelength maxima. At 318.15 K, MYR binds to α2M with a binding constant of 2.4 × 103 M-1, which indicates significant binding. The ΔG value was found to be - 7.56 kcal mol-1 at 298.15 K, suggesting the interaction to be spontaneous and thermodynamically favorable. The secondary structure of α2M does not involve any major change as was confirmed by CD analysis. The molecular docking indicates that Asp-146, Ser-172, Glu-174, and Tyr-180 were the key residues involved in α2M-MYR complex formation. This study contributes to our understanding of the function and mechanism of protein and flavonoid binding by providing a molecular basis of the interaction between MYR and α2M.


Asunto(s)
alfa 2-Macroglobulinas Asociadas al Embarazo , Humanos , Embarazo , Femenino , Simulación del Acoplamiento Molecular , alfa 2-Macroglobulinas Asociadas al Embarazo/química , alfa 2-Macroglobulinas Asociadas al Embarazo/metabolismo , Análisis Espectral , Flavonoides
6.
Molecules ; 28(24)2023 Dec 14.
Artículo en Inglés | MEDLINE | ID: mdl-38138581

RESUMEN

In this study, for the first time, boron oxide nanoflake is analyzed as drug carrier for favipiravir using computational studies. The thermodynamic stability of the boron oxide and favipiravir justifies the strong interaction between both species. Four orientations are investigated for the interaction between the favipiravir and the B3O3 nanoflake. The Eint of the most stable orientation is -26.98 kcal/mol, whereas the counterpoise-corrected energy is -22.59 kcal/mol. Noncovalent interaction index (NCI) and quantum theory of atoms in molecules (QTAIM) analyses are performed to obtain insights about the behavior and the types of interactions that occur between B3O3 nanoflake and favipiravir. The results indicate the presence of hydrogen bonding between the hydrogen in the favipiravir and the oxygen in the B3O3 nanoflake in the most stable complex (FAV@B3O3-C1). The electronic properties are investigated through frontier molecular orbital analysis, dipole moments and chemical reactivity descriptors. These parameters showed the significant activity of B3O3 for favipiravir. NBO charge analysis transfer illustrated the charge transfer between the two species, and UV-VIS analysis confirmed the electronic excitation. Our work suggested a suitable drug carrier system for the antiviral drug favipiravir, which can be considered by the experimentalist for better drug delivery systems.


Asunto(s)
Compuestos de Boro , Teoría Cuántica , Teoría Funcional de la Densidad , Portadores de Fármacos
7.
Environ Res ; 204(Pt A): 111920, 2022 03.
Artículo en Inglés | MEDLINE | ID: mdl-34464618

RESUMEN

One of the main causes for Alzheimer disease is the abnormal self-assembly of the amyloid-beta (Aß) peptide, which in turn forms a toxic ß-rich aggregation. A recent study suggests that gold nanoparticles (AuNPs) can inhibit the Aß aggregation. Nevertheless, the effects of AuNPs on Aß peptide system are still ambiguous and needs exploration that is more detailed. Molecular dynamics simulations have been carried out to investigate the aggregation mechanism of Aß42 peptide for 500 ns. During simulation, C-terminus regions of Met 35-Ala42 residues exhibits ß-sheet conformations. Meanwhile, the Au144MC coordination induces substantial α-helical character, both α-helix and 310-helix structure at 0-500ns, in the region of Asp1-Arg5 and Val36-Ile41 residues. The Au144MC strongly coordinates with Asp1, Ala2, Glu3, Phe4, Asp7, Tyr10 and Gln15 residues that plays the significant effects to loss the ß-sheet geometry in the N-terminal region and it converted into random α-helix, turn and bend conformation. On comparing the RMSF of the Aß42 peptide and Aß42-Au144MC complex shows that the coordination of Au144MC results in greater rigidity of the Aß42 peptide backbone regions with exemptions for the Asp1, Ala2, Glu3, Leu34, Ile41 and Ala42 residues due to the strong binding between the metal cluster and the CHC (Leu17-Ala21) region. The structural stability of the Aß42 peptide and Aß42-Au144MC complex is enhanced by the several intermolecular and intramolecular interactions and it was visibly revealed in the H-bond. From the above results, it is very evident that the Au144MC can be used as inhibitor agent for the oligomerization of Aß42.


Asunto(s)
Enfermedad de Alzheimer , Nanopartículas del Metal , Péptidos beta-Amiloides , Oro , Humanos , Fragmentos de Péptidos , Termodinámica
8.
Environ Res ; 211: 113079, 2022 08.
Artículo en Inglés | MEDLINE | ID: mdl-35276197

RESUMEN

Silver doped hydroxyapatite and titanium oxide nanocomposites have been obtained by sol-gel techniques with novel antimicrobial activities for biomedical applications. The synthesis of Ca10-X AgX (PO4)6(OH)2 along with titanium oxide nanoparticles with XAg = 0 (HAp/TiO2), 0.1, 0.25 and 0.5 (Ag:HAp/TiO2-NCS) was performed. The developed crystalline phase was characterized via X-ray diffraction (XRD), and the morphological features were executed via scanning and transmission electron microscopy (SEM/TEM). The HAp/TiO2 and silver doped HAp/TiO2 nanocomposites were spherical grains, with needle and flower-like structures. XRD examination revealed the crystalline phases of HAp/TiO2 and Ag-doped HAp/TiO2 nanocomposites. The crystallite size of HAp/TiO2 and Ag-doped HAp/TiO2 nanocomposites determined from the XRD pattern was ranged between 16 nm and 20 nm. The FTIR analysis confirms the presence of stretching and vibrational peaks for the presence of silver doped HAp/TiO2. The EDAX analysis showed the existence of major elements of HAp/TiO2 and Ag-HAp/TiO2 nanostructured composites. HAp/TiO2 and silver doped HAp/TiO2 were active against both Gram-positive and Gram-negative bacteria such as, E. coli (MTCC 443), S. typhi (MTCC 733), and S. aureus (MTCC 3160). The photocatalytic absorption spectrum implied an increased absorption rate of methylene blue by HAp/TiO2 and silver doped HAp/TiO2 nanocomposites. The photocatalytic activity revealed that 50% Ag doped HAp/TiO2 optimally improved photocatalytic activity.


Asunto(s)
Nanocompuestos , Plata , Antibacterianos/química , Antibacterianos/farmacología , Catálisis , Escherichia coli , Bacterias Gramnegativas , Bacterias Grampositivas , Nanocompuestos/química , Plata/química , Staphylococcus aureus , Titanio/química
9.
Environ Res ; 204(Pt A): 111915, 2022 03.
Artículo en Inglés | MEDLINE | ID: mdl-34419472

RESUMEN

For the optimization of silver nanoparticle production, a central composite design was used with three parameters: AgNO3 concentration, green tea extract concentration, and temperature at three different levels. The size of the synthesized silver nanoparticle, its UV absorbance, zeta potential, and polydispersity index were set as the response parameters. Silver nanoparticles obtained in the optimization process were characterized and its efficacy on colorimetric detection of mercury was evaluated. The response variables were significant for the factors analyzed, and each variable had a significant model (P < 0.05). The ideal conditions were: 1 mM AgNO3, 0.5% green tea extract, and 80 °C temperature. To analyze the produced AgNPs under certain ideal conditions, Fourier transform infrared spectroscopy (FTIR), dynamic light scattering (DLS), transmission electron microscopy (TEM), scanning electron microscopy (SEM), and X-ray diffraction (XRD) were used. The UV-visible spectra of AgNPs revealed an absorption maxima at 424 nm. The XRD pattern reveals a significant diffraction peak at 38.25°, 44.26°, 64.43°, and 77.49°, which corresponds to the (111), (200), (220), and (311) planes of polycrystalline face-centered cubic (fcc) silver, respectively. The TEM and SEM analyses confirmed that the particles were spherical, and dynamic light scattering study determined the average diameter of AgNPs to be 77.4 nm. The AgNPs have a zeta potential of -62.6 mV, as determined by the zeta sizer analysis. The AgNPs detects mercury at a micromolar concentration. Furthermore, the environmentally friendly generated AgNPs were used to detect mercury in a colorimetric method that was effectively employed for analytical detection of Hg2+ ions in an aqueous environment for the purpose of practical application.


Asunto(s)
Mercurio , Nanopartículas del Metal , Antibacterianos , Colorimetría , Residuos Industriales , Extractos Vegetales , Plata , , Aguas Residuales
10.
Environ Res ; 206: 112492, 2022 04 15.
Artículo en Inglés | MEDLINE | ID: mdl-34929189

RESUMEN

Textile wastewater threatens people health by alluring diseases and revealing public existing close to the waste to the dangerous products within. Because waste causes a risk to the environment and people, waste management making is the main challenge of the municipal world. Environmental process such as toxic dye degradation can be stepped up through photochemical process such as visible light induced catalytic degradation. Here, the successful synthesis of co-doping of Al and F into TiO2 nanoparticles (Al-F∕TiO2 NPs) by solid state reaction method comprising different proportions of co-dopants is evaluated for the applications of degrading organic synthetic dyes and textile dyeing waste water. Influence of co-dopants was studied in their optical, structural, compositional, morphological and vibrational properties. The average crystallite size of Al-F∕TiO2 NPs was found as 15 nm.FTIR and UV-vis spectrum confirmed F and Al atoms were incorporated into the TiO2 lattice.The absorption edges slightly moved to shorter wavelength by increasing level of dopants and this specifies the control of optical absorption of TiO2 by the incorporation of F and Al3+ ions.The EDS spectrum indicates the purity of the samples. The highest zone of inhibition for the prepared nanoparticles over Staphylococcus aureus reached to 22 mm. The rate constant (kapp) value of MB, MO and textile waste water is 0.0138/min, 0.0174/min and 0.0139/min for the prepared nanoparticles respectively. The study of photocatalytic degradation of visible light assisted MB, MO and real textile waste water by Al-F∕TiO2 NPs revealed that the prepared nanoparticles act as ideal catalyst by tuning the concentration of co-dopants in TiO2.


Asunto(s)
Nanopartículas , Aguas Residuales , Catálisis , Colorantes , Humanos , Nanopartículas/química , Textiles , Titanio/química , Aguas Residuales/química
11.
Environ Res ; 204(Pt B): 112073, 2022 03.
Artículo en Inglés | MEDLINE | ID: mdl-34537200

RESUMEN

ZnGa2O4 nanocomposites have been widely used for photocatalytic degradation of industrial dyes. In this work, ZnGa2O4 was synthesized from zinc sulphate heptahydrate ZnSO4.10H2O and Gallium (III) oxide (Ga2O3) by hydrothermal method. As prepared, ZnGa2O4 nanocomposites was used as a photocatalyst degradation of three organic dyes rhodamine-B, methylene blue, and methyl orange, under ultraviolet (UV) light irradiation. The ZnGa2O4 nanocomposites structure, morphology, size and optical properties were studied by X-ray diffraction (XRD), Fourier transform Raman spectroscopy (FT-Raman), scanning electron microscopy (SEM), Transmission electron microscopes (TEM) and photoluminescence spectra (PL). Moreover, the results explained the rate-controlling mechanisms of the dye degradation process followed by second-order kinetics. After 100 min of adsorption kinetic models, the decomposition of rhodamine-B (7.2 Ct mg/L, 5.2 Ct mg/L, and 4.1 Ct mg/L), methylene blue (42.8 qt mg/g, 44.8 qt mg/g, and 45.9 qt mg/g), and methyl orange (42.8 qe mg/g, 44.8 qe mg/g, and 45.9 qe mg/g) respectively. This investigation study offers a promising method to design more efficient ZnGa2O4 nanocomposites based photocatalytic degradation of industrial organic dyes.


Asunto(s)
Nanocompuestos , Catálisis , Colorantes , Azul de Metileno , Rayos Ultravioleta
12.
Environ Res ; 205: 112560, 2022 04 01.
Artículo en Inglés | MEDLINE | ID: mdl-34915030

RESUMEN

A modest sol-gel method has been employed to prepare the pure and Ag doped MnO2 nanoparticles and methodologically studied their physical, morphological, and photosensitive properties through XRD, TEM, EDAX, Raman, UV, PL and N2 adsorption - desorption study. Tetragonal crystalline arrangement with spherical nanoparticles was found out through XRD and TEM studies. The EDAX studies further supported that formation Ag in the MnO2 crystal matrix. The bandgap energy of Ag doped MnO2 was absorbed through UV spectra. Photo -generated recombination process and surface related defects were further recognized by PL spectra. Through visible light irradiation, the photo - degradation of methyl orange (MO) and phenol dye solutions were observed. The optimum condition of (10 wt% of Ag) Ag doped MnO2 catalyst showed tremendous photocatalytic efficiency towards MO than phenol under same experimental study.


Asunto(s)
Contaminantes Ambientales , Nanoestructuras , Purificación del Agua , Catálisis , Luz , Compuestos de Manganeso , Nanoestructuras/química , Óxidos , Titanio/química
13.
Environ Monit Assess ; 195(1): 12, 2022 Oct 22.
Artículo en Inglés | MEDLINE | ID: mdl-36271213

RESUMEN

The goal of this study was to come up with an efficient method for treating cheese production wastewater. Because the effluent has a higher concentration of organic and inorganic materials, the indigenous microbial treatment process was used to effectively remove total dissolved solids (TDS), chemical oxygen demand (COD), and color without the addition of any nutrients. The indigenous microorganisms were tested for color, TDS, and COD elimination by growing them in "nutrient broth medium" loaded with different amounts of cheese effluent. The isolates were identified by 16S rRNA sequencing, and the results revealed that strain 1 was Enterobacter cloacae, strain 2 was Lactococcus garvieae, and strains 3 and 4 were Bacillus cereus and Bacillus mycoides, respectively. After 36 h of incubation, the data were evaluated. Among all the microbes, E. cloacae reduced TDS and COD from the effluent the most (80 ± 0.2% and 87 ± 0.4% COD, respectively). When compared to individual species, consortia were more efficient (86 ± 0.2% TDS and 90 ± 0.3% COD). On treatment, the correlation coefficient "r" for TDS and COD elimination was found to be 1, resulting in a positive linear connection. The current study suggests that microbial therapies are both effective and environmentally beneficial.


Asunto(s)
Queso , Contaminantes Ambientales , Monitoreo del Ambiente , ARN Ribosómico 16S , Eliminación de Residuos Líquidos/métodos , Aguas Residuales/química
14.
Anal Methods ; 16(18): 2869-2877, 2024 May 09.
Artículo en Inglés | MEDLINE | ID: mdl-38639075

RESUMEN

A nucleophilic addition based chemodosimeter was designed and synthesized with a carbazole donor and an indole acceptor. The addition of a cyanide ion to an electron-deficient indole moiety disrupts the acceptor-donor relationship, resulting in noticeable color shifts and spectrum differences in both the absorption and emission profiles. The design has a D-π-A molecular arrangement. Selectivity was investigated in 90% aqueous DMSO solution of probe CI with various anions such as SCN-, PF6-, NO3-, N3-, I-, HSO4-, CN-, H2PO4-, F-, HS-, ClO4-, Cl-, Br-, and AcO-. An intermolecular charge transfer (ICT) band at 506 nm in the UV-visible spectra vanished and the intensity of emission was quenched at 624 nm upon the addition of CN- ions. These outcomes demonstrate the effective nucleophilic addition of cyanide ions to the electron-deficient indole moiety of the probe, resulting in the formation of a new adduct in which the ICT transition is interrupted when π conjugation is blocked. The Job plot, 1H NMR spectroscopy, and HRMS analysis confirmed the formation of a new product. An outstanding response was shown by paper test strips made using probe molecules for the easy detection of cyanide ions in aqueous solutions. Besides, the probe selectively senses cyanide ions in different water samples.

15.
Heliyon ; 10(11): e31713, 2024 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-38832264

RESUMEN

Humans benefit from a vast community of microorganisms in their gastrointestinal tract, known as the gut microbiota, numbering in the tens of trillions. An imbalance in the gut microbiota known as dysbiosis, can lead to changes in the metabolite profile, elevating the levels of toxins like Bacteroides fragilis toxin (BFT), colibactin, and cytolethal distending toxin. These toxins are implicated in the process of oncogenesis. However, a significant portion of the Bacteroides fragilis genome consists of functionally uncharacterized and hypothetical proteins. This study delves into the functional characterization of hypothetical proteins (HPs) encoded by the Bacteroides fragilis genome, employing a systematic in silico approach. A total of 379 HPs were subjected to a BlastP homology search against the NCBI non-redundant protein sequence database, resulting in 162 HPs devoid of identity to known proteins. CDD-Blast identified 106 HPs with functional domains, which were then annotated using Pfam, InterPro, SUPERFAMILY, SCANPROSITE, SMART, and CATH. Physicochemical properties, such as molecular weight, isoelectric point, and stability indices, were assessed for 60 HPs whose functional domains were identified by at least three of the aforementioned bioinformatic tools. Subsequently, subcellular localization analysis was examined and the gene ontology analysis revealed diverse biological processes, cellular components, and molecular functions. Remarkably, E1WPR3 was identified as a virulent and essential gene among the HPs. This study presents a comprehensive exploration of B. fragilis HPs, shedding light on their potential roles and contributing to a deeper understanding of this organism's functional landscape.

16.
J Ethnobiol Ethnomed ; 20(1): 48, 2024 May 07.
Artículo en Inglés | MEDLINE | ID: mdl-38715115

RESUMEN

BACKGROUND: The use of medicinal plants to treat various veterinary illnesses has been practiced for millennia in many civilizations. Punjab is home to a diverse ethnic community, the majority of whom work in dairy farming, agriculture, and allied professions and have indigenous practices of treating animal illnesses using native flora. This study was designed to (1) document and preserve information about the applications of medicinal plant species in ethnoveterinary remedies among inhabitants of Punjab, Pakistan, and (2) identify popular plants for disease treatment by quantitative analysis of the obtained data and to assess the pharmacological relevance of these species. METHODS: To collect data from informants (N = 279), questionnaires and semi-structured interviews were used. The ethnoveterinary data were analyzed using principal component analysis, relative frequency citation, fidelity level, relative popularity level, and rank order priority. RESULTS: A total of 114 plant species utilized in the ethnoveterinary medicinal system were found, which were divided into 56 families and used to treat 16 different illnesses. The Poaceae family, with 16 species, was the most common in the region. The most commonly employed growth form in herbal preparation was herb (49%). The most used part in ethnoveterinary remedies was leaves (35%), while powder was the most commonly used way for preparing ethnoveterinary remedies (51 applications). According to principal component analysis, the most typically used species in the research region were grasses. Five grasses (Arundo donax, Desmostachya bipinnata, Eleusine indica, Hordeum vulgare, and Pennisetum glaucum) showed a 100% FL value when used to treat diuretics, helminthiasis, digestive problems, fever, cough, worm infestation, indigestion, galactagogue, oral infections, and genital prolapse. The maximum value of disease cured level (DCL%) was recorded at 87.6% for endo- and ecto-parasitic ailments in the study area. CONCLUSION: This study demonstrates that medicinal plants play an important part in satisfying farmers' animal healthcare demands, making it a feasible practice. The study also provides a wealth of knowledge regarding ethnoveterinary methods for further planning and application, providing an option for farmers who cannot afford allopathic therapy.


Asunto(s)
Fitoterapia , Plantas Medicinales , Medicina Veterinaria , Plantas Medicinales/clasificación , Pakistán , Humanos , Femenino , Masculino , Adulto , Persona de Mediana Edad , Medicina Tradicional , Animales , Anciano , Etnobotánica , Adulto Joven , Encuestas y Cuestionarios
17.
Int J Biol Macromol ; 254(Pt 1): 127652, 2024 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-37898247

RESUMEN

Cancer is a life-threatening malignancy and one of the leading global causes of human mortality. New approaches are required for cancer therapy due to the unique properties of cancer cells and the side effects of chemotherapy. Probiotics have gained significant attention in the prevention and treatment of various diseases, including cancer. Therefore, the current study aimed to investigate the anti-cancer effects of probiotics, such as marine Lactobacillus species and their proteins. Five marine Lactobacillus species were isolated and identified from the Tamil Nadu Mangrove Pichavaram (TLMP) forest and named TLMP1, TLMP2, TLMP3, TLMP4, and TLMP5. The Lactobacillus isolates, and their proteins were administered to male golden Syrian hamsters. Tumor formation was effectively controlled in hamsters treated with crude Lactobacillus, extending their lifespan. Additionally, Lactobacillus proteins demonstrated an inhibitory effect on tumor formation in the treated group compared to the control. Molecular docking analysis revealed that Lactobacillus proteins interacted significantly with the cAMP-dependent protein kinase catalytic subunit alpha. Amino acid residues LYS791, MET793, ARG841, ARG842, and LEU844 were involved in active site binding and played a crucial role in inhibiting cAMP-dependent protein kinase.


Asunto(s)
Neoplasias de la Boca , Probióticos , Masculino , Humanos , Lactobacillus/metabolismo , India , Simulación del Acoplamiento Molecular , Probióticos/uso terapéutico , Probióticos/farmacología , Proteínas Quinasas Dependientes de AMP Cíclico/metabolismo
18.
Int J Biol Macromol ; 258(Pt 2): 128833, 2024 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-38128806

RESUMEN

Natural polysaccharides exhibit numerous beneficial properties, such as antioxidant, antitumor, hypoglycemic, and hypolipidemic activities. Moringa oleifera seeds are of high dietary and therapeutic value which drew a lot of attention. However, the regulation effect on anti-inflammatory activity of polysaccharides remains to be studied. Herein, novel bioactive polysaccharides (MOSP-1) were extracted from Moringa oleifera seeds, and the anti-inflammatory properties of MOSP-1 were uncovered. Ultrasound-assisted extraction (UAE) was used to prepare the polysaccharides with optimized conditions (70 °C, 43 min, and liquid-solid-ratio 15 mL/g). Then, DEAE-Sepharose Fast Flow columns were applied to isolate and purify MOSP-1. Rhamnose, arabinose, galactose, and glucose were identified as the monosaccharide constituents of MOSP-1, with a molecular weight of 5.697 kDa. Their proportion in molarity was 1:0.183:0.108:0.860 and 8 types of glycosidic linkages were discovered. Bioactive assays showed that MOSP-1 possessed scavenging activities against DPPH and ABTS radicals, confirming its potential antioxidation efficacy. In vitro experiments revealed that MOSP-1 could reduce the expression of inflammation-related cytokines, inhibit the activation of ERK, JNK, and p38 (the MAPK signaling pathway), and enhance phagocytic functions. This study indicates that polysaccharides (MOSP-1) from Moringa oleifera seeds with anti-inflammatory properties may be used for functional food and pharmaceutical product development.


Asunto(s)
Moringa oleifera , Moringa oleifera/química , Ultrasonido , Polisacáridos/química , Antioxidantes/química , Antiinflamatorios , Semillas/química
19.
Acta Trop ; 255: 107216, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38636584

RESUMEN

According to the World Health Organization, infectious diseases, particularly those caused by multidrug-resistant bacteria (MDR), are projected to claim the lives of 15 million people by 2050. Septicemia carries a higher morbidity and mortality rate than infections caused by susceptible Pseudomonas aeruginosa, and MDR-mediated ocular infections can lead to impaired vision and blindness. To identify and develop a potential drug against MDR P. aeruginosa, we employed in silico reverse genetics-based target mining, drug prioritization, and evaluation. Rare Lipoprotein A (RlpA) was selected as the target protein, and its crystal structure was geometrically optimized. Molecular docking and virtual screening analyses revealed that RlpA exhibits strong binding affinity with 11 compounds. Among these, 3-chlorophthalic acid was evaluated, and subsequent in vitro assays demonstrated significant anti-Pseudomonas activity with negligible cytotoxicity. The compound was further evaluated against both drug-susceptible and MDR P. aeruginosa strains in vitro, with cytotoxicity assessed using an MTT assay. The study demonstrated that 3-chlorophthalic acid exhibits potent anti-Pseudomonas activity with minimal toxicity to host cells. Consequently, this compound emerges as a promising candidate against MDR P. aeruginosa, warranting further investigation.


Asunto(s)
Antibacterianos , Farmacorresistencia Bacteriana Múltiple , Pruebas de Sensibilidad Microbiana , Simulación del Acoplamiento Molecular , Pseudomonas aeruginosa , Pseudomonas aeruginosa/efectos de los fármacos , Antibacterianos/farmacología , Antibacterianos/química , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Humanos , Lipoproteínas/farmacología , Lipoproteínas/genética , Lipoproteínas/química , Infecciones por Pseudomonas/tratamiento farmacológico , Infecciones por Pseudomonas/microbiología
20.
Sci Rep ; 14(1): 12641, 2024 06 02.
Artículo en Inglés | MEDLINE | ID: mdl-38825663

RESUMEN

In many countries with wastewater irrigation and intensive use of fertilizers (minerals and organics), heavy metal deposition by crops is regarded as a major environmental concern. A study was conducted to determine the impact of mineral fertilizers, cow manure, poultry manure, leaf litter, and sugarcane bagasse on soil's trace Pb content and edible parts of vegetables. It also evaluated the risk of lead (Pb) contamination in water, soil, and food crops. Six vegetables (Daucus carota, Brassica oleracea, Pisum sativum, Solanum tuberosum, Raphanus sativus, and Spinacia oleracea) were grown in the field under twelve treatments with different nutrient and water inputs. The lead concentrations in soil, vegetables for all treatments and water samples ranged from 1.038-10.478, 0.09346-9.0639 mg/kg and 0.036-0.26448 mg/L, The concentration of lead in soil treated with wastewater in treatment (T6) and vegetable samples was significantly higher, exceeding the WHO's permitted limit. Mineral and organic fertilizers combined with wastewater treatment reduced lead (Pb) concentrations in vegetables compared to wastewater application without organic fertilizers. Health risk indexes for all treatments except wastewater treatment (T6) were less than one. Pb concentrations in mineral fertilizers, cow manure, poultry manure, leaf litter, and sugarcane bagasse treated were determined to pose no possible risk to consumers.


Asunto(s)
Fertilizantes , Plomo , Estiércol , Verduras , Aguas Residuales , Fertilizantes/análisis , Verduras/metabolismo , Verduras/química , Estiércol/análisis , Aguas Residuales/química , Aguas Residuales/análisis , Plomo/análisis , Plomo/metabolismo , Animales , Contaminantes del Suelo/análisis , Suelo/química , Bovinos , Productos Agrícolas/metabolismo , Productos Agrícolas/crecimiento & desarrollo , Productos Agrícolas/química , Minerales/análisis
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