Characteristics and prognostic implications of peripheral blood lymphocyte subsets in patients with anti-MDA5 antibody positive dermatomyositis-interstitial lung disease.

OBJECTIVES: To examine the characteristics of blood lymphocyte subsets in dermatomyositis-interstitial lung disease (DM-ILD) inflicted patients with positive anti-melanoma differentiation-associated gene 5 (anti-MDA5), as well as its prognosis value in this set of patients. METHODS: Data were retrospectively collected from 253 DM-ILD patients from three hospitals in China between January 2016 to January 2021. Patients were grouped into anti-MDA5 antibody positive group (MDA5+ DM-ILD) and anti-MDA5 antibody negative group (MDA5- DM-ILD) based on myositis-specific autoantibody test results. Demographic characteristics, lymphocyte subsets patterns and other clinical features were compared between the two groups. The association of lymphocyte subsets with 180-day mortality was investigated using survival analysis in MDA5+ DM-ILD. RESULTS: Out of 253 eligible patients with DM-ILD, 59 patients were anti-MDA5+ and 194 were anti-MDA5-. Peripheral blood lymphocyte count, CD3+ count, percentage of CD3+, CD3+CD4+ count, and CD3+CD8+ count was lower in MDA5+ DM-ILD than in MDA5- DM-ILD- (all P < 0.001) as well as CD3-CD19+ count (P = 0.04). In MDA5+ DM-ILD, CD3+CD8+ count ≤ 49.22 cell/µL (HR = 3.81, 95%CI [1.20,12.14]) and CD3-CD19+ count ≤ 137.64 cell/µL (HR = 3.43, 95%CI [1.15,10.24]) were independent predictors of mortality. CD3+CD8+ count ≤ 31.38 cell/µL was associated with a higher mortality risk in all DM-ILD patients (HR = 8.6, 95%CI [2.12,31.44]) after adjusting for anti-MDA5 and other clinical characteristics. CONCLUSION: Significant lymphocytes decrease was observed in MDA5+ DM-ILD patients. CD3+CD8+ cell count was associated with worse prognosis in both MDA5+ DM-ILD and all DM-ILD patients.

Dual-color oligo-FISH can reveal chromosomal variations and evolution in Oryza species.

Fluorescence in situ hybridization using probes based on oligonucleotides (oligo-FISH) is a useful tool for chromosome identification and karyotype analysis. Here we developed two oligo-FISH probes that allow the identification of each of the 12 pairs of chromosomes in rice (Oryza sativa). These two probes comprised 25 717 (green) and 25 215 (red) oligos (45 nucleotides), respectively, and generated 26 distinct FISH signals that can be used as a barcode to uniquely label each of the 12 pairs of rice chromosomes. Standard karyotypes of rice were established using this system on both mitotic and meiotic chromosomes. Moreover, dual-color oligo-FISH was used to characterize diverse chromosomal abnormalities. Oligo-FISH analyses using these probes in various wild Oryza species revealed that chromosomes from the AA, BB or CC genomes generated specific and intense signals similar to those in rice, while chromosomes with the EE genome generated less specific signals and the FF genome gave no signal. Together, the oligo-FISH probes we established will be a powerful tool for studying chromosome variations and evolution in the genus Oryza.

Mechanism of heavy metal ion biosorption by microalgal cells: A mathematic approach.

Microalgal biomasses have been established as promising biosorbents for biosorption to remove heavy metal ions (HMIs) from wastewaters and contaminated natural waterbodies. Understanding the mechanism is important for the development of cost-effective processes for large scale applications. In this paper, a simple mathematical model was proposed for the predication of biosorption capacity of HMI by microalgal cells based on single cell mass, cell size, and HMI radius. One fundamental assumption based on which this model was developed, i.e., the biosorption of HMI by microalgal cells is predominantly monolayer bio-adsorption, was established based on kinetic, isothermal, FTIR, and Pb(II) distribution data generated in this study and in literature. The model was validated using a combination of experimental and literature data as well, demonstrating its capability to provide reasonable estimations although with discrepancies. The biosorption capacities of HMIs (mmol/g) by Chlorella vulgaris were experimentally determined to be in the following order: Pb(II)(0.360)> Zn(II)(0.325)> Cu(II)(0.254)> Ni(II)(0.249)> Cd(II)(0.235)> Co(II)(0.182). We systematically investigated the deviations of the predicted biosorption capacities in term of the effects of a few important parameters that were unaccounted for in the model, including the nanostructures on cell surface, HMI electronegativity, and biosorption buffer pH. Results suggest that the nanostructures on cell wall, likely the hairlike fibers, might be the primary locations where the binding sites for HMI were housed. Furthermore, isothermal data, which is suported by the predictions of this model, indicate the each effective binding site on C. vulgaris cell surface could bind to more than one Co(II) in biosorption while each of the other five HMIs tested in this study required more than one binding sites.

Biosorption of heavy metal ions by green alga Neochloris oleoabundans: Effects of metal ion properties and cell wall structure.

Effects of metal ion proprieties and the cell wall structure of green alga Neochloris oleoabundans were investigated on five strategically selected heavy metal ions, Pb(II), Hg(II), Zn(II), Cd(II) and Cu(II). The biosorption of these ions were energy-independent and spontaneous Langmuir adsorption. The adsorption capacities of Pb(II), Hg(II), Zn(II), Cd(II) and Cu(II) were determined to be 1.03, 0.91, 1.20, 0.65 and 1.23 mmol/g, respectively. Data suggest that peptide-containing molecules and non-cellulosic polysaccharides on cell wall were the primary sites of adsorption. Ion Pb(II) showed the strongest inhibitive effects on the adsorption of other metal ions on cells in binaries, corresponding to its large affinity to the biosorbents, which was next only to that of Cu(II). A linear relation was established for the first time between the adsorption capacity and the impact factor, which is defined in this paper as the electronegativity of a metal ion normalized by its atomic radius. In other words, adsorption capacity of N. oleoabundans biomass to the tested two-valence metal ions is proportional to the electronegativity and inversely proportional to the radius of the metal ions. Cell aggregation was caused by the addition of Cu(II), which exhibited distinctive adsorption behaviors than other metal ions.