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1.
New Phytol ; 241(1): 343-362, 2024 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-37858933

RESUMEN

Most plant reoviruses are phloem-limited, but the mechanism has remained unknown for more than half a century. Southern rice black-streaked dwarf virus (Fijivirus, Reoviridae) causes phloem-derived tumors, where its virions, genomes, and proteins accumulate, and it was used as a model to explore how its host plant limits the virus within its phloem. High-throughput volume electron microscopy revealed that only sieve plate pores and flexible gateways rather than plasmodesmata had a sufficiently large size exclusion limit (SEL) to accommodate virions and potentially serve as pathways of virion movement. The large SEL gateways were enriched within the proliferated sieve element (SE) layers of tumors. The lack of such connections out of the SE-enriched regions of tumors defined a size-dependent physical barrier to high flux transportation of virions. A working model is proposed to demonstrate the mechanism underlying limitation of virus within phloem.


Asunto(s)
Neoplasias , Microscopía Electrónica de Volumen , Floema/metabolismo , Neoplasias/metabolismo
2.
Cancer Cell Int ; 24(1): 111, 2024 Mar 25.
Artículo en Inglés | MEDLINE | ID: mdl-38528582

RESUMEN

BACKGROUND: Gastric cancer is currently estimated to be the fifth leading common cancer in the world, and responsible for about one million new cases and an estimated 769,000 cancer-related deaths each year. WFDC21P is long non-coding RNA and has been reported to play critical roles in serval types of cancer. Our research aims to investigate the biological effects and molecular mechanism of WFDC21P in gastric cancer. METHODS: Datasets (GSE53137, GSE58828, and GSE109476) in GEO database were used to screen differential expressed lncRNAs in gastric cancer by online GEO2R analysis tool. Quantitative RT-PCR was used to verify the above prediction in ten pairs of gastric cancer and corresponding paracancerous tissues. Pan-cancer analysis was used to analyze the expression of WFDC21P in different types of cancer. Small interfering RNAs were used to WFDC21P knockdown. CCK-8 and colony formation assays were used to measure the proliferation and tumorigenesis abilities. Wound healing and Transwell assay were used to detect the migration and invasion abilities. Proteins that interact with WFDC21P were predicted by catRAPID database. RNA pull down and RNA Immunoprecipitation were used to confirm the interaction. Western blotting was used to detect the key proteins level in calcium homeostasis signaling pathway. Loss-of-function and rescue assays were used to evaluate the biological function of SEC63 at the background of WFDC21P silencing. RESULTS: WFDC21P was upregulated in gastric cancer tissues and cell lines. WFDC21P downregulation suppressed proliferation, tumorigenesis, migration, invasion, and promoted apoptosis in gastric cancer. SEC63 protein had the capability to bind with WFDC21P and the expression of SEC63 was regulated by WFDC21P. SEC63 was also upregulated in gastric cancer and exerted effects during tumor growth and metastasis. CONCLUSIONS: This study confirmed that lncRNA WFDC21P aggravated gastric cancer malignant behaviors by interacting with SEC63 to regulate the calcium homeostasis signaling pathway.

3.
Plant Cell Environ ; 46(2): 650-664, 2023 02.
Artículo en Inglés | MEDLINE | ID: mdl-36482792

RESUMEN

To study viral infection, the direct structural visualization of the viral life cycle consisting of virus attachment, entry, replication, assembly and transport is essential. Although conventional electron microscopy (EM) has been extremely helpful in the investigation of virus-host cell interactions, three-dimensional (3D) EM not only provides important information at the nanometer resolution, but can also create 3D maps of large volumes, even entire virus-infected cells. Here, we determined the ultrastructural details of tomato spotted wilt virus (TSWV)-infected plant cells using focused ion beam scanning EM (FIB-SEM). The viral morphogenesis and dynamic transformation of paired parallel membranes (PPMs) were analyzed. The endoplasmic reticulum (ER) membrane network consisting of tubules and sheets was related to viral intracellular trafficking and virion storage. Abundant lipid-like bodies, clustering mitochondria, cell membrane tubules, and myelin-like bodies were likely associated with viral infection. Additionally, connecting structures between neighboring cells were found only in infected plant tissues and showed the characteristics of tubular structure. These novel connections that formed continuously in the cell wall or were wrapped by the cell membranes of neighboring cells appeared frequently in the large-scale 3D model, suggesting additional strategies for viral trafficking that were difficult to distinguish using conventional EM.


Asunto(s)
Tospovirus , Virus , Tospovirus/ultraestructura , Plantas , Retículo Endoplásmico/metabolismo , Microscopía Electrónica
4.
PLoS Biol ; 18(12): e3001051, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-33370778

RESUMEN

Coordination of cell growth is essential for the development of the brain, but the molecular mechanisms underlying the regulation of glial and neuronal size are poorly understood. To investigate the mechanisms involved in glial size regulation, we used Caenorhabditis elegans amphid sheath (AMsh) glia as a model and show that a conserved cis-Golgi membrane protein eas-1/GOLT1B negatively regulates glial growth. We found that eas-1 inhibits a conserved E3 ubiquitin ligase rnf-145/RNF145, which, in turn, promotes nuclear activation of sbp-1/ SREBP, a key regulator of sterol and fatty acid synthesis, to restrict cell growth. At early developmental stages, rnf-145 in the cis-Golgi network inhibits sbp-1 activation to promote the growth of glia, and when animals reach the adult stage, this inhibition is released through an eas-1-dependent shuttling of rnf-145 from the cis-Golgi to the trans-Golgi network to stop glial growth. Furthermore, we identified long-chain polyunsaturated fatty acids (LC-PUFAs), especially eicosapentaenoic acid (EPA), as downstream products of the eas-1-rnf-145-sbp-1 pathway that functions to prevent the overgrowth of glia. Together, our findings reveal a novel and potentially conserved mechanism underlying glial size control.


Asunto(s)
Ácido Eicosapentaenoico/farmacología , Aparato de Golgi/metabolismo , Neuroglía/metabolismo , Animales , Caenorhabditis elegans/metabolismo , Proteínas de Caenorhabditis elegans/metabolismo , Tamaño de la Célula/efectos de los fármacos , Ácido Eicosapentaenoico/metabolismo , Ácidos Grasos Insaturados/metabolismo , Aparato de Golgi/efectos de los fármacos , Neuroglía/efectos de los fármacos , Ubiquitina-Proteína Ligasas/metabolismo
5.
Sensors (Basel) ; 23(23)2023 Nov 29.
Artículo en Inglés | MEDLINE | ID: mdl-38067867

RESUMEN

Most unsupervised domain adaptation (UDA) methods align feature distributions across different domains through adversarial learning. However, many of them require introducing an auxiliary domain alignment model, which incurs additional computational costs. In addition, they generally focus on the global distribution alignment and ignore the fine-grained domain discrepancy, so target samples with significant domain shifts cannot be detected or processed for specific tasks. To solve these problems, a bi-discrepancy network is proposed for the cross-domain prediction task. Firstly, target samples with significant domain shifts are detected by maximizing the discrepancy between the outputs of the dual regressor. Secondly, the adversarial training mechanism is adopted between the feature generator and the dual regressor for global domain adaptation. Finally, the local maximum mean discrepancy is used to locally align the fine-grained features of different degradation stages. In 12 cross@-domain prediction tasks generated on the C-MAPSS dataset, the root-mean-square error (RMSE) was reduced by 77.24%, 61.72%, 38.97%, and 3.35% on average, compared with the four mainstream UDA methods, which proved the effectiveness of the proposed method.

6.
Langmuir ; 38(30): 9136-9147, 2022 08 02.
Artículo en Inglés | MEDLINE | ID: mdl-35849073

RESUMEN

The potential applications of textile materials in fog harvesting have long been demonstrated. This work designed novel fog harvesters according to the distinct features of elastic textile threads (ETTs) to enhance droplet capture, large-droplet growth, and droplet pouring and improve fog harvesting efficiency. We prepared m@ETTs (modified ETTs) using three novel chemical and physical methods. First, we prepared spandex elastic threads with a non-uniform rough surface containing silica nanoparticles and titanium particles through the sol-gel triethoxymethylsilane method. Second, we prepared a rubber/polyester thread with a rough surface by breaking the thread shell with toluene solution, creating knots on the surface of the rubber core. Third, we prepared a polyurethane thread with a bumpy superhydrophobic surface by spraying a tetrafluoroethylene adhesive and silica nanoparticles on the thread. Furthermore, we connected ETTs to an automatic stretching-recovery system to obtain auto-ETTs as another group of harvesters. We obtained auto-i@ETTs by introducing elastic bumps/knots onto the auto-ETT surface. The fog harvesting efficiencies of m@ETTs were approximately 60-120% greater than those of the ETTs. The water harvesting rate of the auto-i@ETT was 2.5 times that of the ETT, with the highest water harvesting rate of auto-i@ETT reaching 3.35 g/h/cm2. Moreover, several novel principles of droplet behavior and thread elasticity were revealed. The elastic elongation level of the ETTs was proportional to their water harvesting efficiency. The stretching-recovery state of the elastic thread did not influence the water contact angle but affected the droplet state on the thread surface. The temporary slack/stick state of adjacent elastic threads on auto-ETTs contributed to droplet convergence and pouring. Overall, this novel approach demonstrates the significant potential of elastic threads in fog harvesting applications.


Asunto(s)
Goma , Titanio , Dióxido de Silicio , Textiles , Agua
7.
Sensors (Basel) ; 23(1)2022 Dec 21.
Artículo en Inglés | MEDLINE | ID: mdl-36616640

RESUMEN

Accurate prediction of aviation safety levels is significant for the efficient early warning and prevention of incidents. However, the causal mechanism and temporal character of aviation accidents are complex and not fully understood, which increases the operation cost of accurate aviation safety prediction. This paper adopts an innovative statistical method involving a least absolute shrinkage and selection operator (LASSO) and long short-term memory (LSTM). We compiled and calculated 138 monthly aviation insecure events collected from the Aviation Safety Reporting System (ASRS) and took minor accidents as the predictor. Firstly, this paper introduced the group variables and the weight matrix into LASSO to realize the adaptive variable selection. Furthermore, it took the selected variable into multistep stacked LSTM (MSSLSTM) to predict the monthly accidents in 2020. Finally, the proposed method was compared with multiple existing variable selection and prediction methods. The results demonstrate that the RMSE (root mean square error) of the MSSLSTM is reduced by 41.98%, compared with the original model; on the other hand, the key variable selected by the adaptive spare group lasso (ADSGL) can reduce the elapsed time by 42.67% (13 s). This shows that aviation safety prediction based on ADSGL and MSSLSTM can improve the prediction efficiency of the model while keeping excellent generalization ability and robustness.


Asunto(s)
Accidentes de Aviación , Aviación , Accidentes , Accidentes de Aviación/prevención & control
8.
Plant Cell Environ ; 44(6): 1858-1868, 2021 06.
Artículo en Inglés | MEDLINE | ID: mdl-33665861

RESUMEN

The reproductive processes of several deciduous trees are highly sensitive to Zn deficiency. An understanding of the patterns of Zn storage and remobilization during bud development and bud break is critical for the development of fertilization strategies to prevent deficiencies and may be valuable in selection and breeding programs to develop more Zn-resilient cultivars. In this study, we provide insights into the in situ distribution of Zn in almond reproductive organs at tissue, cellular, and subcellular scales using synchrotron-based X-ray fluorescence. The concentrations of Zn in different parts of the vegetative and reproductive tissues were also analysed. Our results show that the small branches subtending the flower and fruit, pollen grain, transmitting tissues of styles, and seed embryo are all important storage sites for Zn. An increase in Zn concentrations in almond reproductive organs mostly occur during the expanding growth phase, such as bud-flush and the mid-fruit enlargement stage; however, Zn transport to floral parts and fruit tissues was restricted at the pedicel and seed coat, suggesting a bottleneck in the export of Zn from the mother plant to filial tissues. Our results provide direct visual evidence for in-situ Zn distribution within the reproductive tissues of a deciduous tree species.


Asunto(s)
Prunus dulcis/crecimiento & desarrollo , Prunus dulcis/metabolismo , Zinc/metabolismo , Transporte Biológico , Flores/metabolismo , Frutas/crecimiento & desarrollo , Frutas/metabolismo , Imagen Molecular , Espectrometría por Rayos X/métodos , Zinc/análisis
9.
J Struct Biol ; 212(1): 107600, 2020 10 01.
Artículo en Inglés | MEDLINE | ID: mdl-32798655

RESUMEN

Compared with conventional two-dimensional transmission electron microscopy (TEM), focused ion beam scanning electron microscopy (FIB-SEM) can provide more comprehensive 3D information on cell substructures at the nanometer scale. Biological samples prepared by cryofixation using high-pressure freezing demonstrate optimal preservation of the morphology of cellular structures, as these are arrested instantly in their near-native states. However, samples from cryofixation often show a weak back-scatter electron signal and bad image contrast in FIB-SEM imaging. In addition, it is impossible to do large amounts of heavy metal staining. This is commonly achieved via established osmium impregnation (OTO) en bloc staining protocols. Here, we compared the FIB-SEM image quality of brain tissues prepared using several common freeze-substitution media, and we developed an approach that overcomes these limitations through a combination of osmium tetroxide, uranyl acetate, tannic acid, and potassium permanganate at proper concentrations, respectively. Using this optimized sample preparation protocol for high-pressure freezing and freeze-substitution, perfect smooth membrane morphology, even of the lipid bilayers of the cell membrane, was readily obtained using FIB-SEM. In addition, our protocol is broadly applicable and we demonstrated successful application to brain tissues, plant tissues, Caenorhabditis elegans, Candida albicans, and chlorella. This approach combines the potential of cryofixation for 3D large volume analysis of subcellular structures with the high-resolution capabilities of FIB-SEM.


Asunto(s)
Criopreservación/métodos , Imagenología Tridimensional/métodos , Microscopía Electrónica de Rastreo/métodos , Microscopía Electrónica de Transmisión/métodos , Animales , Substitución por Congelación/métodos , Congelación , Metales Pesados/química , Ratones , Coloración y Etiquetado/métodos
10.
Cell Tissue Res ; 379(3): 487-495, 2020 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-31768711

RESUMEN

Trichoid sensilla are the most common mechanoreceptors in insects; depending on their distribution, they can act as either exteroceptors or proprioceptors. In this study, the internal structure of the trichoid sensillum from Nilaparvata lugens was studied, using focused ion beam scanning electron microscopy (FIB-SEM). We reconstructed a three-dimensional (3D) model derived from the FIB-SEM data set. The model displayed characteristic mechanosensory sensilla components, including a hair inserted in the socket, a dendrite going through the laminated cuticle, and an electron-dense tubular body at the dendrite terminal. The detailed 3D model showed the relationship between the microtubules within the tubular body and those outside of the tubular body. We also found an autocellular junction in the tormogen cell, indicating that the tormogen cell grows around the dendrite sheath to form a hollow column shape during sensilla morphogenesis.


Asunto(s)
Hemípteros/ultraestructura , Animales , Hemípteros/anatomía & histología , Hemípteros/metabolismo , Mecanorreceptores/química , Mecanorreceptores/metabolismo , Microscopía Electrónica de Rastreo/métodos
11.
Am J Hum Genet ; 98(2): 256-74, 2016 Feb 04.
Artículo en Inglés | MEDLINE | ID: mdl-26833333

RESUMEN

Comprehensive identification of somatic structural variations (SVs) and understanding their mutational mechanisms in cancer might contribute to understanding biological differences and help to identify new therapeutic targets. Unfortunately, characterization of complex SVs across the whole genome and the mutational mechanisms underlying esophageal squamous cell carcinoma (ESCC) is largely unclear. To define a comprehensive catalog of somatic SVs, affected target genes, and their underlying mechanisms in ESCC, we re-analyzed whole-genome sequencing (WGS) data from 31 ESCCs using Meerkat algorithm to predict somatic SVs and Patchwork to determine copy-number changes. We found deletions and translocations with NHEJ and alt-EJ signature as the dominant SV types, and 16% of deletions were complex deletions. SVs frequently led to disruption of cancer-associated genes (e.g., CDKN2A and NOTCH1) with different mutational mechanisms. Moreover, chromothripsis, kataegis, and breakage-fusion-bridge (BFB) were identified as contributing to locally mis-arranged chromosomes that occurred in 55% of ESCCs. These genomic catastrophes led to amplification of oncogene through chromothripsis-derived double-minute chromosome formation (e.g., FGFR1 and LETM2) or BFB-affected chromosomes (e.g., CCND1, EGFR, ERBB2, MMPs, and MYC), with approximately 30% of ESCCs harboring BFB-derived CCND1 amplification. Furthermore, analyses of copy-number alterations reveal high frequency of whole-genome duplication (WGD) and recurrent focal amplification of CDCA7 that might act as a potential oncogene in ESCC. Our findings reveal molecular defects such as chromothripsis and BFB in malignant transformation of ESCCs and demonstrate diverse models of SVs-derived target genes in ESCCs. These genome-wide SV profiles and their underlying mechanisms provide preventive, diagnostic, and therapeutic implications for ESCCs.


Asunto(s)
Carcinoma de Células Escamosas/genética , Neoplasias Esofágicas/genética , Estudios de Asociación Genética/métodos , Variación Genética , Línea Celular , Ciclina D1/genética , Variaciones en el Número de Copia de ADN , Receptores ErbB/genética , Carcinoma de Células Escamosas de Esófago , Eliminación de Gen , Reordenamiento Génico , Genes p16 , Genoma Humano , Genómica , Humanos , Hibridación Fluorescente in Situ , Receptor ErbB-2/genética , Receptor Tipo 1 de Factor de Crecimiento de Fibroblastos/genética , Receptor Notch1/genética , Reproducibilidad de los Resultados , Análisis de Secuencia de ARN , Translocación Genética
12.
Acta Biomater ; 174: 217-227, 2024 Jan 15.
Artículo en Inglés | MEDLINE | ID: mdl-38030101

RESUMEN

The silk-spinning process of the silkworms transforms the liquid silk solution to a solid state under mild conditions, making it an attractive model for bioinspiration However, the precise mechanism behind silk expulsion remains largely unknown. Here we selected the silkworms as representative models to investigate the silk-spinning mechanism. We used serial block-face scanning electron microscopy (SBF-SEM) to reconstruct the three-dimensional structures of the spinnerets in silkworms at various stages and with different gene backgrounds. By comparing the musculature and duct deformation of these spinneret models during the spinning process, we were able to simulate the morphological changes of the spinneret. Based on the results, we proposed three essential factors for silkworm spinning: the pressure generated by the silk gland, the opening duct, and the pulling force generated by head movement. Understanding the silkworm spinning process provides insights into clarify the fluid-ejecting mechanism of a group of animals. Moreover, these findings are helpful to the development of biomimetic spinning device that mimics the push-and-pull dual-force system in silkworms. STATEMENT OF SIGNIFICANCE: The silkworms' spinning system produces fibers under mild conditions, making it an ideal candidate for bioinspiration. However, the mechanism of silk expulsion is unknown, and the three-dimensional structure of the spinneret is still uncertain. In this study, we reconstructed a detailed 3-dimensional model of the spinneret at near-nanometer resolution, and for the first time, we observed the changes that occur before and during the silk-spinning process. Our reconstructed models suggested that silkworms have the ability to control the spinning process by opening or closing the spinning duct. During the continuously spinning period, both the pressure generated by the silk gland and the pulling force resulting from head movement work in tandem to expel the silk solution. We believe that gaining a full understanding of the spinning process steps can advance our ability to spin synthetic fibers with properties comparable to those of native fibers by mimicking the natural spinning process.


Asunto(s)
Materiales Biomiméticos , Bombyx , Fibroínas , Animales , Seda/química , Bombyx/genética , Fenómenos Mecánicos , Fibroínas/química
13.
Adv Sci (Weinh) ; 11(6): e2306833, 2024 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-38044320

RESUMEN

Solar-driven interfacial evaporation (SDIE) has attracted great attention by offering a zero-carbon-emission solution for clean water production. The manipulation of the surface structure of the evaporator markedly promotes the enhancement of light capture and the improvement of evaporation performance. Herein, inspired by seedless lotus pod, a flexible pristine polypyrrole (PPy) membrane with macro/micro-bubble and nanotube asymmetric structure is fabricated through template-assisted interfacial polymerization. The macro- and micro-hierarchical structure of the open bubbles enable multiple reflections inner and among the bubble cavities for enhanced light trapping and omnidirectional photothermal conversion. In addition, the multilevel structure (macro/micro/nano) of the asymmetric PPy (PPy-A) membrane induces water evaporation in the form of clusters, leading to a reduction of water evaporation enthalpy. The PPy-A membranes achieve a full-spectrum light absorption of 96.3% and high evaporation rate of 2.03 kg m-2  h-1 under 1 sun. Long-term stable desalination is also verified with PPy-A membranes by applying one-way water channel. This study demonstrates the feasibility of pristine PPy membranes in SDIE applications, providing guidelines for modulation of the evaporator topologies toward high-efficient solar evaporation.

14.
Nat Commun ; 15(1): 2553, 2024 Mar 22.
Artículo en Inglés | MEDLINE | ID: mdl-38519472

RESUMEN

Lysosomal Storage Disorders (LSDs), which share common phenotypes, including enlarged lysosomes and defective lysosomal storage, are caused by mutations in lysosome-related genes. Although gene therapies and enzyme replacement therapies have been explored, there are currently no effective routine therapies against LSDs. During lysosome reformation, which occurs when the functional lysosome pool is reduced, lysosomal lipids and proteins are recycled to restore lysosome functions. Here we report that the sorting nexin protein SNX8 promotes lysosome tubulation, a process that is required for lysosome reformation, and that loss of SNX8 leads to phenotypes characteristic of LSDs in human cells. SNX8 overexpression rescued features of LSDs in cells, and AAV-based delivery of SNX8 to the brain rescued LSD phenotypes in mice. Importantly, by screening a natural compound library, we identified three small molecules that enhanced SNX8-lysosome binding and reversed LSD phenotypes in human cells and in mice. Altogether, our results provide a potential solution for the treatment of LSDs.


Asunto(s)
Enfermedades por Almacenamiento Lisosomal , Ratones , Animales , Humanos , Enfermedades por Almacenamiento Lisosomal/genética , Enfermedades por Almacenamiento Lisosomal/terapia , Enfermedades por Almacenamiento Lisosomal/metabolismo , Proteínas/metabolismo , Encéfalo/metabolismo , Mutación , Lisosomas/metabolismo , Nexinas de Clasificación/genética , Nexinas de Clasificación/metabolismo
15.
Zhonghua Yi Xue Za Zhi ; 93(12): 906-9, 2013 Mar 26.
Artículo en Zh | MEDLINE | ID: mdl-23863674

RESUMEN

OBJECTIVE: To explore the associations of preoperative plasma levels of fibrinogen and D-dimer with clinicopathologic parameters and overall survival in colorectal cancer patients after curative resection. METHODS: From January 2002 to December 2003, a total of 341 colorectal cancer patients underwent curative resection. And their relevant clinical data were reviewed. The median age was 58 years (range: 23 - 90 years) and the median follow-up period was 64 months (range: 5 - 89 months). The preoperative plasma levels of fibrinogen and D-dimer were examined, the correlation of clinicopathologic findings and overall survival was analyzed. A Log-rank test was used for univariate analysis and a Cox regression model for multivariate analysis. RESULTS: The preoperative plasma levels of fibrinogen and D-dimer were (3.7 ± 0.7) g/L and (0.49 ± 0.18) mg/L respectively. Elevated plasma levels of fibrinogen were associated with advanced tumor stage (P = 0.008), venous invasion (P = 0.006), postoperative distant metastases (P < 0.01) and lymph node involvement (P = 0.001), but not with histologic grade (P = 0.232), and invasion depth (P = 0.253). The overall survival is 64.5% (220/341). Elevated plasma levels of D-dimer were associated with advanced tumor stage (P = 0.013), invasion depth (P = 0.007) and lymph node involvement (P = 0.001), but not with histologic grade (P = 0.082), venous invasion (P = 0.746) or postoperative distant metastases (P = 0.131). Multivariate analysis showed that preoperative plasma levels of fibrinogen (P = 0.029), histologic grade (P = 0.001), and lymph node involvement (P = 0.001) were independent prognostic factors. CONCLUSIONS: High preoperative plasma levels of fibrinogen and D-dimer are associated with clinicopathologic parameters. And a high preoperative plasma level of fibrinogen is associated with distant metastases and poor prognosis after curative resection in colorectal cancer patients.


Asunto(s)
Neoplasias Colorrectales/sangre , Productos de Degradación de Fibrina-Fibrinógeno/análisis , Fibrinógeno/análisis , Adulto , Anciano , Anciano de 80 o más Años , Neoplasias Colorrectales/patología , Neoplasias Colorrectales/cirugía , Femenino , Humanos , Masculino , Persona de Mediana Edad , Estadificación de Neoplasias , Periodo Posoperatorio , Pronóstico , Adulto Joven
16.
Front Oncol ; 13: 1257120, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-38239645

RESUMEN

Background: Dysregulation of the long non-coding RNA metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) has been linked to some oncogenic pathways that induce cancer initiation and progression. This meta-analysis was conducted to specifically summarize the most recent research on MALAT1 function in human gastric cancer (GC). Methods: The eligible studies were first identified by searching HowNet, Web of Science, PubMed, The Cochrane Library, Embase, and Nature databases for studies published as of April 1, 2023. The meta-analysis included 14 studies assessing MALAT1 expression and presenting clinical parameters and survival outcomes. Results: The results illustrated that high MALAT1 expression is predictive of lymph node metastasis (pooled odds ratio [OR] = 2.99, 95% confidence interval [CI] = 1.97-4.54, P < 0.001) and distant metastasis in GC (OR = 3.11, 95% CI = 1.68-5.75, P < 0.001). In addition, MALAT1 was associated with GC tumor invasion (T3/T4 vs. T1/T2: OR = 2.90, 95% CI = 1.90- 4.41, P <0.001) and TNM stage (III/IV vs I/II: OR = 2.93, 95% CI: 1.80-4.77, P <0.001). Additionally, higher MALAT-1 expression predicted poorer overall survival in patients with GC (hazard ratio = 1.64, 95% CI = 1.20-2.09, P < 0.001). Conclusions: The current findings suggest that the high MALAT1 expression is an adverse biomarker for prognostic outcomes, lymph node metastasis, TNM stage, and distant metastasis in GC and MALAT1 could be a prognostic biomarker for GC.

17.
Sci Total Environ ; 891: 164516, 2023 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-37263437

RESUMEN

In order to explain reasons why flue-gas CO2 (normally containing high CO2) enhanced carbon fixation and lipids synthesis with increased photochemical electron production in microalgae cells. Focused ion beam scanning electron microscopy (FIB-SEM) was combined with proteomics and phosphorylation modification mics to clarify mechanisms of lipids synthesis at protein and organelle levels in Chlorella pyrenoidosa cells cultivated with high CO2 concentration (15 % v/v). The volumes of chloroplast and endoplasmic reticulum in subcellular organelles increased by 47 % and 306 %, respectively, compared with the control, which improved conversion efficiency of starch grains to lipids (lipid content increased by 57 %). Proteomics and modifications omics revealed that protein translation and ribosome structure and biogenesis-related enzymes were significantly modified by phosphorylation, which regulated protein biological functions. Glycolysis, pentose phosphate pathway and other carbohydrate metabolic pathways were markedly enriched and promoted the expression of lipid synthase, which was consistent with enhanced carbon fixation in photosynthesis, expansion of subcellular organelles and improved lipids synthesis.


Asunto(s)
Chlorella , Microalgas , Chlorella/metabolismo , Proteómica , Dióxido de Carbono/metabolismo , Lípidos , Orgánulos/metabolismo , Microalgas/metabolismo , Biomasa
18.
Micron ; 166: 103413, 2023 03.
Artículo en Inglés | MEDLINE | ID: mdl-36657308

RESUMEN

The quantitative study of plasmodesmata (PD) frequency is routine in plant science for providing information on the potential of intercellular transportation. Here, we report quantification of plasmodesmatal frequency in virus-infected tobacco vascular tissues using serial sectioning and image analysis. The image datasets were collected by focused ion beam-scanning electron microscopy (FIB-SEM), and the measurements of plasmodesmatal frequency were performed after image analysis with commercial computational programs. With a 5-nm step size (less than half the diameter of PD) during FIB sectioning, exhaustive PD sampling was performed in regions of interest. Segmentation of cell wall (CW) and PD from the background densities was performed manually, and PD were assigned automatically to individual CW interfaces by image analysis and then quantified. The PD quantification results were used to compare the plamodesmatal frequencies among different CW interfaces of individual cells and the average frequencies among different cell types were calculated. CWs lacking PD distribution were found in several cellular types, and the PD frequency were used to determine the possible pathways of PD-based symplasmic transportation. The method enables imaging of samples of several cells containing multiple CW interfaces and minimizes PD omission during sectioning and imaging.


Asunto(s)
Imagenología Tridimensional , Plasmodesmos , Imagenología Tridimensional/métodos , Microscopía Electrónica de Rastreo , Procesamiento de Imagen Asistido por Computador/métodos , Microscopía Electrónica de Volumen
19.
J Ovarian Res ; 16(1): 213, 2023 Nov 09.
Artículo en Inglés | MEDLINE | ID: mdl-37946316

RESUMEN

The oocyte cumulus complex is mainly composed of an oocyte, the perivitelline space, zona pellucida and numerous granulosa cells. The cumulus granulosa cells (cGCs) provide a particularly important microenvironment for oocyte development, regulating its growth, maturation and meiosis. In this study, we studied the internal structures and cell-to-cell connections of mouse cGCs using focused ion beam scanning electron microscopy (FIB-SEM). We reconstructed three-dimensional models to display characteristic connections between the oocyte and cGCs, and to illustrate various main organelles in cGCs together with their interaction relationship. A special form of cilium identified in granulosa cell was never reported in previous literature.


Asunto(s)
Oocitos , Microscopía Electrónica de Volumen , Femenino , Ratones , Animales , Oocitos/fisiología , Células de la Granulosa/fisiología , Oogénesis , Células del Cúmulo
20.
Protoplasma ; 260(3): 885-897, 2023 May.
Artículo en Inglés | MEDLINE | ID: mdl-36416933

RESUMEN

To clarify dynamic changes of organelle microstructures in Chlorella pyrenoidosa cells during photosynthetic growth with CO2 fixation, three-dimensional (3D) organelle microstructures in three growth periods of meristem, elongation, and maturity were quantitatively determined and comprehensively reconstructed with focused ion beam scanning electron microscopy (FIB-SEM). The single round-pancake mitochondria in each cell split into a dumbbell and then into a circular ring, while the barycenter distance of mitochondria to chloroplast and nucleus was reduced to 45.5% and 88.3% to strengthen energy transfer, respectively. The single pyrenoid consisting of a large part and another small part in each chloroplast gradually developed to a mature state in which the two parts were nearly equal in size. The nucleolus progressively became larger with euchromatin replication. The number of starch grains gradually increased, but the mean grain volume remained nearly unchanged.


Asunto(s)
Chlorella , Microscopía Electrónica de Rastreo , Imagenología Tridimensional/métodos , Mitocondrias , Núcleo Celular
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