Pleiotropic physiological effects in the plant growth-promoting bacterium Azospirillum brasilense following chromosomal labeling in the clpX gene.

Azospirillum brasilense 8-I was chromosomally labeled with green fluorescent protein (gfp) genes, using either the native promoterless gfp gene or the mutant gfpmut2 gene under the transcriptional control of the neomycin phosphate transferase (npt2) promoter inserted into Tn5 suicide plasmid vectors. One A. brasilense exconjugant, showing a steady and strong fluorescence following irradiation with 365-nm UV light was characterized in detail. This strain, A. brasilense 8-I-gfp showed increased N(2)-fixation of approximately threefold, up to a twofold increase in exopolysaccharide production, and a significant decrease in indole-3-acetic acid and poly-beta-hydroxybutyrate production over the parental strain. Sequence analysis showed that the Tn5 carrying the gfp gene was inserted in the clpX gene encoding a heat-shock protein. This data is consistent with a model in which the observed physiological changes are a consequence of pleiotropic changes that occur as a consequence of impaired heat shock (stress) protein synthesis. In summary, (i) chromosomally labelled Azospirillum brasilense was obtained carrying either native or mutant gfp genes, (ii) Pleiotropic physiological effects were caused by disruption of the clpX gene as the consequence of the insertion, (iii) a new indole-3-acetic acid-attenuated mutant of A. brasilense producing only 0.25% of the indole-3-acetic acid produced by the wild-type is presented.

Mangrove health in an arid environment encroached by urban development--a case study.

Urban development will soon encroach upon several protected and largely unspoiled arid climate mangroves ecosystems located along the lagoon called Ensenada de La Paz in Baja California Sur, Mexico. Many of these mangroves are located on a large sandbar that separates the lagoon on the south side from Bahía de La Paz to the north. A general evaluation of the current status of these mangroves was conducted to establish biological and physicochemical indicators of the health of these mangroves to serve as a natural or predevelopment baseline in future management. The following parameters were measured in the feeding channels of the mangroves and at the mouth of the channels: vegetation coverage, species and health, and levels of dissolved oxygen, pH, salinity, total nitrogen, ammonium, nitrates and nitrites, phosphorus ions, and organic matter in sediments and seawater. The microbiological elements that were studied included aerobic bacteria, N2-fixing bacteria, inorganic phosphate solubilizers, coliform, and phytoplankton diversity. Bird populations were counted, with special attention to migratory and resident birds and protected and endangered species. A comprehensive analysis of all the elements indicated that the health of the sandbar mangrove populations is good despite the proximity of a modest urban center. It also demonstrated that several biological and physicochemical parameters used in this study, including the birds, can serve as indicators of mangrove health and as a baseline for future management of mangroves in regions with arid climates.

Emergency management communication on university Web sites: A 7-year study.

In the last several years, disasters-both manmade and natural-have taken their toll on college campuses. Extant research shows that college campuses have greatly increased their emergency management efforts. One area in which colleges and universities have made strides is emergency management communication. There has been some research examining emergency management communication across campuses, but there is still much to learn. This research fills a gap in this area by investigating the use of university Web sites to disseminate emergency management information to the university stakeholders. Data were gathered in 2007 and 2014 from the Web sites of public, 4-year universities in Indiana. The results show that universities are using the Internet to communicate emergency management information to their stakeholders. Among the most common categories of information available on the Web sites are links to other agencies, university response information, and threat levels. Implications for future research are discussed.

Molecular characterization of diazotrophic and denitrifying bacteria associated with mangrove roots.

An analysis of the molecular diversity of N(2) fixers and denitrifiers associated with mangrove roots was performed using terminal restriction length polymorphism (T-RFLP) of nifH (N(2) fixation) and nirS and nirK (denitrification), and the compositions and structures of these communities among three sites were compared. The number of operational taxonomic units (OTU) for nifH was higher than that for nirK or nirS at all three sites. Site 3, which had the highest organic matter and sand content in the rhizosphere sediment, as well as the lowest pore water oxygen concentration, had the highest nifH diversity. Principal component analysis of biogeochemical parameters identified soil texture, organic matter content, pore water oxygen concentration, and salinity as the main variables that differentiated the sites. Nonmetric multidimensional scaling (MDS) analyses of the T-RFLP data using the Bray-Curtis coefficient, group analyses, and pairwise comparisons between the sites clearly separated the OTU of site 3 from those of sites 1 and 2. For nirS, there were statistically significant differences in the composition of OTU among the sites, but the variability was less than for nifH. OTU defined on the basis of nirK were highly similar, and the three sites were not clearly separated on the basis of these sequences. The phylogenetic trees of nifH, nirK, and nirS showed that most of the cloned sequences were more similar to sequences from the rhizosphere isolates than to those from known strains or from other environments.

Azospirillum-plant relationships: physiological, molecular, agricultural, and environmental advances (1997-2003).

This review presents a critical and comprehensive documentation and analysis of the developments in agricultural, environmental, molecular, and physiological studies related to Azospirillum cells, and to Azospirillum interactions with plants, based solely on information published between 1997 and 2003. It was designed as an update of previous reviews (Bashan and Levanony 1990; Bashan and Holguin 1997a), with a similar scope of interest. Apart from an update and critical analysis of the current knowledge, this review focuses on the central issues of Azospirillum research today, such as, (i) physiological and molecular studies as a general model for rhizosphere bacteria; (ii) co-inoculation with other microorganisms; (iii) hormonal studies and re-consideration of the nitrogen contribution by the bacteria under specific environmental conditions; (iv) proposed Azospirillum as a non-specific plant-growth-promoting bacterium; (v) re-introduction of the "Additive Hypothesis," which suggests involvement of multiple mechanisms employed by the bacteria to affect plant growth; (vi) comment on the less researched areas, such as inoculant and pesticide research; and (vii) proposes possible avenues for the exploitation of this bacterium in environmental areas other than agriculture.

Molecular diversity of denitrifying genes in continental margin sediments within the oxygen-deficient zone off the Pacific coast of Mexico.

To understand the composition and structure of denitrifying communities in the oxygen-deficient zone off the Pacific coast of Mexico, the molecular diversity of nir genes from sediments obtained at four stations was examined by using a PCR-based cloning approach. A total of 50 operational taxonomic units (OTUs) for nirK and 82 OTUs for nirS were obtained from all samples. Forty-four of the nirS clones and 31 of the nirK clones were sequenced; the levels of similarity of the nirS clones were 52 to 92%, and the levels of similarity of the nirS clones were 50 to 99%. The percentages of overlapping OTUs between stations were 18 to 30% for nirS and 5 to 8% for nirK. Sequence analysis revealed that 26% of the nirS clones were related to the nirS genes of Alcaligenes faecalis (80 to 94% similar) and Pseudomonas stutzeri (80 to 99%), whereas 3 to 31% of the nirK clones were closely related to the nirK genes of Pseudomonas sp. strain G-179 (98 to 99%), Bradyrhizobium japonicum (91%), Blastobacter denitrificans (83%), and Alcaligenes xylosoxidans (96%). The rest of the clones, however, were less than 80% similar to nirS and nirK sequences available in sequence databases. The results of a principal-component analysis (PCA) based on the percentage of OTUs and biogeochemical data indicated that the nitrate concentration and oxygen have an effect on the denitrifying communities. The communities at the stations in oxygen-deficient zones were more similar than the communities at the stations in the oxygenated zone. The denitrifying communities were more similar at the stations that were closer together and had similar nitrate levels. Also, the results of PCA based on biogeochemical properties suggest that geographic location and biogeochemical conditions, especially the nitrate and oxygen levels, appear to be the key factors that control the structure of denitrifying communities.

Efecto de los inoculantes microbianos sobre la promoción de crecimiento de plantulas de mangle y plantas de Citrullus vulgaris San Andrés Isla, Colombia / Microbial Inoculantes Effects on Growth Promotion of Mangrove and Citrullus vulgaris San Andrés Isla, Colombia

Con el fin de probar la efectividad de dos inoculantes microbianos (aislados a partir de raicillas de mangle rojo y negro) en el crecimiento y establecimiento de plántulas de mangle y de patilla, se realizaron cuatro pruebas en campo en San Andrés Isla, Colombia. Se aplicaron dichos inoculantes en: propágulos de Avicennia germinans colectados en un área de manglar y sembrados en macetas sobre sustrato solarizado (con el fin de disminuir la carga microbiana), plántulas de A. germinans y Rhizophora mangle colectadas en cercanía de árboles semilleros, plántulas de A. germinans y R. mangle sembradas y mantenidas en vivero y en semillas de patilla (Citrullus vulgaris) sembradas en un cultivo libre de fertilizantes químicos. Las variables tomadas como indicativo de crecimiento y desarrollo vegetal fueron: número de nodos, número de hojas y longitud del tallo. Los inoculantes (microorganismos solubilizadores de fosfatos -MSF- y bacterias fijadoras de nitrógeno -BFN-) se aplicaron en el material vegetal mencionado, efectuando mediciones durante tres meses. Los resultados muestran un efecto positivo de estimulación de crecimiento medido en longitud del tallo en las plantas tratadas con los inoculantes, específicamente en patilla y propágulos de A. germinans mantenidos en vivero.