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1.

hiPathDB: a human-integrated pathway database with facile visualization.

Yu, Namhee; Seo, Jihae; Rho, Kyoohyoung; Jang, Yeongjun; Park, Jinah; Kim, Wan Kyu; Lee, Sanghyuk.

Nucleic Acids Res; 40(Database issue): D797-802, 2012 Jan.

Artículo en Inglés | MEDLINE | ID: mdl-22123737

2.

GARNET--gene set analysis with exploration of annotation relations.

Rho, Kyoohyoung; Kim, Bumjin; Jang, Youngjun; Lee, Sanghyun; Bae, Taejeong; Seo, Jihae; Seo, Chaehwa; Lee, Jihyun; Kang, Hyunjung; Yu, Ungsik; Kim, Sunghoon; Lee, Sanghyuk; Kim, Wan Kyu.

BMC Bioinformatics; 12 Suppl 1: S25, 2011 Feb 15.

Artículo en Inglés | MEDLINE | ID: mdl-21342555

3.

Enhanced Sensitivity of Nonsmall Cell Lung Cancer with Acquired Resistance to Epidermal Growth Factor Receptor-Tyrosine Kinase Inhibitors to Phenformin: The Roles of a Metabolic Shift to Oxidative Phosphorylation and Redox Balance.

Kim, Suntae; Im, Ji Hye; Kim, Wan Kyu; Choi, Young Jae; Lee, Ji-Yoon; Kim, Sang Kyum; Kim, Sun Jo; Kwon, Sung Won; Kang, Keon Wook.

Oxid Med Cell Longev; 2021: 5428364, 2021.

Artículo en Inglés | MEDLINE | ID: mdl-34367462

4.

Age-dependent evolution of the yeast protein interaction network suggests a limited role of gene duplication and divergence.

Kim, Wan Kyu; Marcotte, Edward M.

PLoS Comput Biol; 4(11): e1000232, 2008 Nov.

Artículo en Inglés | MEDLINE | ID: mdl-19043579

5.

SCOPPI: a structural classification of protein-protein interfaces.

Winter, Christof; Henschel, Andreas; Kim, Wan Kyu; Schroeder, Michael.

Nucleic Acids Res; 34(Database issue): D310-4, 2006 Jan 01.

Artículo en Inglés | MEDLINE | ID: mdl-16381874

6.

Using structural motif descriptors for sequence-based binding site prediction.

Henschel, Andreas; Winter, Christof; Kim, Wan Kyu; Schroeder, Michael.

BMC Bioinformatics; 8 Suppl 4: S5, 2007 May 22.

Artículo en Inglés | MEDLINE | ID: mdl-17570148

7.

The many faces of protein-protein interactions: A compendium of interface geometry.

Kim, Wan Kyu; Henschel, Andreas; Winter, Christof; Schroeder, Michael.

PLoS Comput Biol; 2(9): e124, 2006 Sep 29.

Artículo en Inglés | MEDLINE | ID: mdl-17009862

8.

Erratum: Modulation of mRNA and lncRNA expression dynamics by the Set2-Rpd3S pathway.

Kim, Ji Hyun; Lee, Bo Bae; Oh, Young Mi; Zhu, Chenchen; Steinmetz, Lars M; Lee, Yookyeong; Kim, Wan Kyu; Lee, Sung Bae; Buratowski, Stephen; Kim, TaeSoo.

Nat Commun; 8: 16122, 2017 11 29.

Artículo en Inglés | MEDLINE | ID: mdl-29184145

9.

Modulation of mRNA and lncRNA expression dynamics by the Set2-Rpd3S pathway.

Kim, Ji Hyun; Lee, Bo Bae; Oh, Young Mi; Zhu, Chenchen; Steinmetz, Lars M; Lee, Yookyeong; Kim, Wan Kyu; Lee, Sung Bae; Buratowski, Stephen; Kim, TaeSoo.

Nat Commun; 7: 13534, 2016 11 28.

Artículo en Inglés | MEDLINE | ID: mdl-27892458

10.

Survey of the geometric association of domain-domain interfaces.

Kim, Wan Kyu; Ison, Jon C.

Proteins; 61(4): 1075-88, 2005 Dec 01.

Artículo en Inglés | MEDLINE | ID: mdl-16247798

11.

Large scale statistical prediction of protein-protein interaction by potentially interacting domain (PID) pair.

Kim, Wan Kyu; Park, Jong; Suh, Jung Keun.

Genome Inform; 13: 42-50, 2002.

Artículo en Inglés | MEDLINE | ID: mdl-14571373

12.

Ogura-CMS in Chinese cabbage (Brassica rapa ssp. pekinensis) causes delayed expression of many nuclear genes.

Dong, Xiangshu; Kim, Wan Kyu; Lim, Yong-Pyo; Kim, Yeon-Ki; Hur, Yoonkang.

Plant Sci; 199-200: 7-17, 2013 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-23265314

13.

Transcriptomic analysis of insulin-sensitive tissues from anti-diabetic drug treated ZDF rats, a T2DM animal model.

Kim, Yo Na; Kim, Sangok; Kim, Il-Yong; Shin, Jae Hoon; Cho, Sooyoung; Yi, Sun Shin; Kim, Wan Kyu; Kim, Kyung-Sub; Lee, Sanghyuk; Seong, Je Kyung.

PLoS One; 8(7): e69624, 2013.

Artículo en Inglés | MEDLINE | ID: mdl-23922760

14.

Clinical validation of colorectal cancer biomarkers identified from bioinformatics analysis of public expression data.

Jung, Yeonjoo; Lee, Sanghyuk; Choi, Hyung-Seok; Kim, Soon-Nam; Lee, Eunyoung; Shin, Youngah; Seo, Jihae; Kim, Bumjin; Jung, Yeonhwa; Kim, Wan Kyu; Chun, Ho-Kyung; Lee, Woo Yong; Kim, Jaesang.

Clin Cancer Res; 17(4): 700-9, 2011 Feb 15.

Artículo en Inglés | MEDLINE | ID: mdl-21304002

15.

Inferring mouse gene functions from genomic-scale data using a combined functional network/classification strategy.

Kim, Wan Kyu; Krumpelman, Chase; Marcotte, Edward M.

Genome Biol; 9 Suppl 1: S5, 2008.

Artículo en Inglés | MEDLINE | ID: mdl-18613949

16.

A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.

Peña-Castillo, Lourdes; Tasan, Murat; Myers, Chad L; Lee, Hyunju; Joshi, Trupti; Zhang, Chao; Guan, Yuanfang; Leone, Michele; Pagnani, Andrea; Kim, Wan Kyu; Krumpelman, Chase; Tian, Weidong; Obozinski, Guillaume; Qi, Yanjun; Mostafavi, Sara; Lin, Guan Ning; Berriz, Gabriel F; Gibbons, Francis D; Lanckriet, Gert; Qiu, Jian; Grant, Charles; Barutcuoglu, Zafer; Hill, David P; Warde-Farley, David; Grouios, Chris; Ray, Debajyoti; Blake, Judith A; Deng, Minghua; Jordan, Michael I; Noble, William S; Morris, Quaid; Klein-Seetharaman, Judith; Bar-Joseph, Ziv; Chen, Ting; Sun, Fengzhu; Troyanskaya, Olga G; Marcotte, Edward M; Xu, Dong; Hughes, Timothy R; Roth, Frederick P.

Genome Biol; 9 Suppl 1: S2, 2008.

Artículo en Inglés | MEDLINE | ID: mdl-18613946

17.

Equivalent binding sites reveal convergently evolved interaction motifs.

Henschel, Andreas; Kim, Wan Kyu; Schroeder, Michael.

Bioinformatics; 22(5): 550-5, 2006 Mar 01.

Artículo en Inglés | MEDLINE | ID: mdl-16287935

18.

Hispidin derivatives from the mushroom Inonotus xeranticus and their antioxidant activity.

Lee, In-Kyoung; Seok, Soon-Ja; Kim, Wan-Kyu; Yun, Bong-Sik.

J Nat Prod; 69(2): 299-301, 2006 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-16499338

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