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1.
J Shoulder Elbow Surg ; 30(12): 2875-2885, 2021 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-34186170

RESUMEN

PURPOSE: We aimed to evaluate the efficacy of a self-manufactured prosthesis of antibiotic-loaded acrylic cement (PROSTALAC) spacer with or without cortical strut allograft in infected total elbow arthroplasty. METHODS: Between March 2009 and February 2018, we enrolled 18 patients (mean age, 66.9 years) who underwent 2-stage revision arthroplasty for prosthetic infection following total elbow arthroplasty. After implant removal in the first stage, we performed débridement and PROSTALAC insertion. During the second stage, we performed reimplantation using a cortical strut allograft for patients with a considerably severe bone defect. The mean follow-up period was 34 months (range, 25-60 months), during which we evaluated the Mayo Elbow Performance Score (MEPS), range of motion (ROM), and blood markers. RESULTS: In all 18 patients, infection control was ensured using intravenous (IV) antibiotic therapy for 6 weeks or IV antibiotics for 4 weeks converting to oral antibiotics for 2 weeks following PROSTALAC insertion. The mean visual analog scale score improved from 8 points preoperatively to 2 points postoperatively, and the mean MEPS improved from 32 points preoperatively to 82 points postoperatively (P < .05). The average ROMs at the last follow-up were 9° to 132° from extension to flexion, respectively. Two patients experienced ulnar nerve neuropraxia after surgery, from which they were resolved. Moreover, 2 and 4 patients developed superficial wound infection and triceps insufficiency, respectively, and there was no infection recurrence. CONCLUSION: In the management of elbow prosthetic infection, 2-stage revision arthroplasty using PROSTALAC spacer insertion in the first stage and cortical strut allograft in the second stage for patients with severe bone defect revealed good clinical results and relatively low infection recurrence rates. However, the complication rate is substantial.


Asunto(s)
Artroplastia de Reemplazo de Codo , Prótesis de Codo , Infecciones Relacionadas con Prótesis , Anciano , Aloinjertos , Antibacterianos/uso terapéutico , Artroplastia de Reemplazo de Codo/efectos adversos , Codo , Prótesis de Codo/efectos adversos , Humanos , Prótesis e Implantes , Infecciones Relacionadas con Prótesis/tratamiento farmacológico , Infecciones Relacionadas con Prótesis/cirugía , Reoperación , Resultado del Tratamiento
2.
Funct Integr Genomics ; 16(3): 269-79, 2016 May.
Artículo en Inglés | MEDLINE | ID: mdl-26882917

RESUMEN

Although it is well known that low-molecular-weight glutenin subunits (LMW-GS) from wheat affect bread and noodle processing quality, the function of specific LMW-GS proteins remains unclear. It is important to find the genes that correspond to individual LMW-GS proteins in order to understand the functions of specific proteins. The objective of this study was to link LMW-GS genes and haplotypes characterized using well known Glu-A3, Glu-B3, and Glu-D3 gene-specific primers to their protein products in a single wheat variety. A total of 36 LMW-GS genes and pseudogenes were amplified from the Korean cultivar Keumkang. These include 11 Glu-3 gene haplotypes, two from the Glu-A3 locus, two from the Glu-B3 locus, and seven from the Glu-D3 locus. To establish relationships between gene haplotypes and their protein products, a glutenin protein fraction was separated by two-dimensional gel electrophoresis (2-DGE) and 17 protein spots were analyzed by N-terminal amino acid sequencing and tandem mass spectrometry (MS/MS). LMW-GS proteins were identified that corresponded to all Glu-3 gene haplotypes except the pseudogenes. This is the first report of the comprehensive characterization of LMW-GS genes and their corresponding proteins in a single wheat cultivar. Our approach will be useful to understand the contributions of individual LMW-GS to the end-use quality of flour.


Asunto(s)
Secuencia de Aminoácidos/genética , Pan , Glútenes/genética , Triticum/genética , Alelos , Electroforesis en Gel Bidimensional , Haplotipos/genética , Peso Molecular , Seudogenes/genética , Espectrometría de Masas en Tándem
3.
Genes (Basel) ; 14(8)2023 08 06.
Artículo en Inglés | MEDLINE | ID: mdl-37628644

RESUMEN

Tiller number is an important trait associated with yield in rice. Tiller number in Korean japonica rice was analyzed under greenhouse conditions in 160 recombinant inbred lines (RILs) derived from a cross between the temperate japonica varieties Odae and Unbong40 to identify quantitative trait loci (QTLs). A genetic map comprising 239 kompetitive allele-specific PCR (KASP) and 57 cleaved amplified polymorphic sequence markers was constructed. qTN3, a major QTL for tiller number, was identified at 132.4 cm on chromosome 3. This QTL was also detected under field conditions in a backcross population; thus, qTN3 was stable across generations and environments. qTN3 co-located with QTLs associated with panicle number per plant and culm diameter, indicating it had pleiotropic effects. The qTN3 regions of Odae and Unbong40 differed in a known functional variant (4 bp TGTG insertion/deletion) in the 5' UTR of OsTB1, a gene underlying variation in tiller number and culm strength. Investigation of variation in genotype and tiller number revealed that varieties with the insertion genotype had lower tiller numbers than those with the reference genotype. A high-resolution melting marker was developed to enable efficient marker-assisted selection. The QTL qTN3 will therefore be useful in breeding programs developing japonica varieties with optimal tiller numbers for increased yield.


Asunto(s)
Oryza , Humanos , Oryza/genética , Fitomejoramiento , Mapeo Cromosómico , Sitios de Carácter Cuantitativo/genética , Regiones no Traducidas 5' , República de Corea
4.
Mol Biol Rep ; 37(2): 717-27, 2010 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-19449126

RESUMEN

Elicitins, extracellular proteins from Phytophthora fungi, elicit a hypersensitivity response (HR), including systemic acquired resistance, in some plants. The elicitin capsicein (approximately 10 kDa) was purified by FPLC from culture filtrates of P. capsici. Purified native and recombinant capsicein induced a hypersensitive response in leaves of the non-host plants Nicotiana glutinosa and Brassica rapa subsp. pekinensis. To search for candidate capsicein-interacting proteins from N. glutinosa, a yeast two-hybrid assay was used. We identified a protein interactor that is homologous to a serine/threonine kinase of the plant receptor-like kinase (RLK) group and designated it NgRLK1. The ORF of NgRLK1 encodes a polypeptide of 832 amino acids (93,490 Da). A conserved domain analysis revealed that NgRLK1 has structural features typical of a plant RLK. NgRLK1 was autophosphorylated, with higher activity in the presence of Mn2+ than Mg2+.


Asunto(s)
Proteínas Fúngicas/metabolismo , Nicotiana/genética , Proteínas Quinasas/genética , Proteínas Quinasas/metabolismo , Secuencia de Aminoácidos , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Secuencia de Bases , Brassica rapa/inmunología , Brassica rapa/metabolismo , Clonación Molecular , Proteínas Fúngicas/aislamiento & purificación , Inmunidad Innata/genética , Inmunidad Innata/fisiología , Datos de Secuencia Molecular , Filogenia , Phytophthora/metabolismo , Enfermedades de las Plantas/genética , Hojas de la Planta/química , Hojas de la Planta/inmunología , Hojas de la Planta/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Unión Proteica , Homología de Secuencia , Nicotiana/enzimología , Nicotiana/inmunología , Nicotiana/metabolismo
5.
FEMS Microbiol Lett ; 276(1): 55-9, 2007 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-17888004

RESUMEN

Xanthomonas oryzae pv. oryzae (Xoo) causes bacterial blight of rice. A random insertional mutant library of Xoo KACC10331 was constructed using a Tn5-derived transposon, and the virulence of the mutants against the susceptible rice cultivar IR24 was assayed. After the virulence assay, the M793 (purD::Tn5) mutant that had reduced virulence against the rice plants was isolated. Thermal asymmetric interlaced-PCR and sequence analysis revealed that the transposon was inserted into the purD gene (encodes a phosphoribosylamine-glycine ligase) of the M793 mutant. The reverse transcriptase-PCR assay revealed that the mutation of the purD gene did not affect the expression of other purine biosynthesis genes. However, the M793 mutant required exogenous purines and thiamine for growth in minimal media. These results indicate that the purD gene plays a crucial role in the growth and virulence of Xoo.


Asunto(s)
Redes y Vías Metabólicas , Mutación , Enfermedades de las Plantas/microbiología , Purinas/biosíntesis , Xanthomonas/crecimiento & desarrollo , Xanthomonas/patogenicidad , Proteínas Bacterianas/genética , Ligasas de Carbono-Nitrógeno/genética , Elementos Transponibles de ADN , ADN Bacteriano/genética , Expresión Génica , Mutagénesis Insercional , Oryza/microbiología , Reacción en Cadena de la Polimerasa , Purinas/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Análisis de Secuencia de ADN , Tiamina/metabolismo , Virulencia , Xanthomonas/genética
6.
Genome Announc ; 4(4)2016 Aug 04.
Artículo en Inglés | MEDLINE | ID: mdl-27492000

RESUMEN

The complete genome sequence of Chinese yam necrotic mosaic virus (ChYNMV) consisting of 8,213 nucleotides containing one open reading frame was determined by the transcriptome data generated from Discorea opposita This is the first report of the complete nucleotide sequence of ChYNMV from Dioscorea opposita in the Republic of Korea.

7.
Mol Cells ; 17(1): 73-80, 2004 Feb 29.
Artículo en Inglés | MEDLINE | ID: mdl-15055531

RESUMEN

We have characterized a novel type I ribosome-inactivating protein (CAP30) from the leaves of Chenopodium album. Purified native CAP30 depurinated the ribosomes of Chenopodium, tomato, and tobacco leaves in vitro. To further characterize this protein, cDNA clones were isolated from a leaf cDNA library using a DNA probe derived from the N-terminal amino acid sequence. Two full-length cDNA clones, CAP30A and CAP30B, were isolated. The two clones were highly homologous (91.4% identity over 280 amino acids) at the deduced amino acid level. Both contain a putative signal peptide of 25 amino acid and a conserved domain commonly found in ribosome-inactivating proteins. This suggests that CAP30 is a single-chain ribosome-inactivating protein. Expression of CAP30 mRNA peaked twice, at 12 and 72 h, after tobacco mosaic virus (TMV) infection or wounding. Transformed Escherichia coli cells expressing pre- or mature CAP had greatly reduced growth rates. These results suggest that CAP30 functions as a broad-spectrum defense-related protein with both antiviral and anti-microbial activity.


Asunto(s)
Chenopodium album/metabolismo , ADN Complementario/metabolismo , N-Glicosil Hidrolasas/química , N-Glicosil Hidrolasas/genética , Ribosomas/química , Secuencia de Aminoácidos , Antivirales/farmacología , Clonación Molecular , Escherichia coli/metabolismo , Biblioteca de Genes , Datos de Secuencia Molecular , Filogenia , Hojas de la Planta/metabolismo , Proteínas de Plantas/química , Isoformas de Proteínas , Señales de Clasificación de Proteína , Estructura Terciaria de Proteína , ARN/química , Proteínas Inactivadoras de Ribosomas , Ribosomas/metabolismo , Homología de Secuencia de Aminoácido , Factores de Tiempo
8.
Microbiol Res ; 167(6): 326-31, 2012 Jun 20.
Artículo en Inglés | MEDLINE | ID: mdl-22169355

RESUMEN

Xanthomonas oryzae pv. oryzae causes bacterial blight in rice, and this bacterial blight has been widely found in the major rice-growing areas. We constructed a transposon mutagenesis library of X. oryzae pv. oryzae and identified a mutant strain (KXOM9) that is deficient for pigment production and virulence. Furthermore, the KXOM9 mutant was unable to grow in minimal medium lacking aromatic amino acids. Thermal asymmetric interlaced-PCR and sequence analysis of KXOM9 revealed that the transposon was inserted into the aroC gene, which encodes a chorismate synthase in various bacterial pathogens. In planta growth assays revealed that bacterial growth of the KXOM9 mutant in rice leaves was severely reduced. Genetic complementation of this mutant with a 7.9-kb fragment containing aroC restored virulence, pigmentation, and prototrophy. These results suggest that the aroC gene plays a crucial role in the growth, attenuation of virulence, and pigment production of X. oryzae pv. oryzae.


Asunto(s)
Liasas de Fósforo-Oxígeno/genética , Liasas de Fósforo-Oxígeno/metabolismo , Xanthomonas/enzimología , Xanthomonas/genética , Aminoácidos Aromáticos/metabolismo , Medios de Cultivo/química , Elementos Transponibles de ADN , ADN Bacteriano/química , ADN Bacteriano/genética , Eliminación de Gen , Prueba de Complementación Genética , Mutagénesis Insercional , Oryza/microbiología , Pigmentos Biológicos/metabolismo , Enfermedades de las Plantas/microbiología , Hojas de la Planta/microbiología , Reacción en Cadena de la Polimerasa , Análisis de Secuencia de ADN , Virulencia , Xanthomonas/crecimiento & desarrollo
9.
Microb Pathog ; 44(6): 473-83, 2008 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-18313258

RESUMEN

Xanthomonas oryzae pathovar oryzae is the causal agent of rice bacterial blight. The plant pathogenic bacterium X. oryzae pv. oryzae expresses a type III secretion system that is necessary for both the pathogenicity in susceptible hosts and the induction of the hypersensitive response in resistant plants. This specialized protein transport system is encoded by a 32.18kb hrp (hypersensitive response and pathogenicity) gene cluster. The hrp gene cluster is composed of nine hrp, nine hrc (hrp conserved) and eight hpa (hrp-associated) genes and is controlled by HrpG and HrpX, which are known as regulators of the hrp gene cluster. Before mutational analysis of these hrp genes, the transcriptional linkages of the core region of the hrp gene cluster from hpaB to hrcC of the X. oryzae pv. oryzae KACC10859 was determined and the non-polarity of EZTn5 insertional mutagenesis was demonstrated by reverse transcription polymerase chain reaction. Pathogenicity assays of these non-polar hrp mutants were carried out on the susceptible rice cultivar, Milyang-23. According to the results of these assays, all hrp-hrc, except hrpF, and hpaB mutants lost their pathogenicity, which indicates that most hrp-hrc genes encode essential pathogenicity factors. On the other hand, most hpa mutants showed decreased virulence in a different pattern, i.e., hpa genes are not essential but are important for pathogenicity.


Asunto(s)
Proteínas Bacterianas/metabolismo , Familia de Multigenes , Oryza/microbiología , Enfermedades de las Plantas/microbiología , Xanthomonas/genética , Proteínas Bacterianas/genética , Elementos Transponibles de ADN , Genoma Bacteriano , Mutagénesis Insercional , Fenotipo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Transcripción Genética , Xanthomonas/metabolismo , Xanthomonas/patogenicidad
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