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1.
Inorg Chem ; 58(9): 6184-6198, 2019 May 06.
Artículo en Inglés | MEDLINE | ID: mdl-31002247

RESUMEN

An eight-member series of CF3-substituted difluorophosphorus corroles was prepared for establishing a structure-activity profile of these high-potential photosensitizers. It consisted of preparing all four possible isomers of the monosubstituted corrole and complexes with 2-, 3-, 4-, and 5-CF3 groups on the macrocycle's periphery. The synthetic pathway to these CF3-substituted derivatives, beginning with (tpfc)PF2, involves two different initial routes: (i) direct electrophilic CF3 incorporation using FSO2CF2CO2Me and copper iodide, or (ii) bromination to achieve the 2,3,8,17,18-pentabrominated compound using excess bromine in methanol. Crystallographic investigations revealed that distortion of the original planar macrocycle is evident even in the monosubstituted case and that it becomes truly severe for the penta-CF3-substituted derivative 5. There is a shift in redox potentials of about 193 mV per -CF3 group, which decreases to only 120 mV for the fifth one in 5. Differences in the electronic spectra suggest that the Gouterman four orbital model decreases in relevance upon gradual -CF3 substitution, a conclusion that was corroborated by DFT calculations. The very significant energy lowering of the frontier orbitals suggested that photoexcitation should lead to a highly oxidizing photocatalyst. This hypothesis was proven true by finding that the most synthetically accessible CF3-substituted derivative is an excellent catalyst for the photoinduced conversion of bromide to bromine (phenol, toluene, and benzene assay).

2.
Angew Chem Int Ed Engl ; 57(26): 7703-7708, 2018 06 25.
Artículo en Inglés | MEDLINE | ID: mdl-29667747

RESUMEN

Metal-ligand coordination is a key interaction in the self-assembly of both biopolymers and synthetic oligomers. Although the binding of metal ions to synthetic proteins and peptides is known to yield high-order structures, the self-assembly of peptidomimetic molecules upon metal binding is still challenging. Herein we explore the self-assembly of three peptoid trimers bearing a bipyridine ligand at their C-terminus, a benzyl group at their N-terminus, and a polar group (N-ethyl-R) in the middle position (R=OH, OCH3 , or NH2 ) upon Cu2+ coordination. X-ray diffraction analysis revealed unique, highly symmetric, dinuclear cyclic structure or aqua-bridged dinuclear double-stranded peptoid helicates, formed by the self-assembly of two peptoid molecules with two Cu2+ ions. Only the macrocycle with the highest number of intermolecular hydrogen bonds is stable in solution, while the other two disassemble to their corresponding monometallic complexes.

3.
Inorg Chem ; 56(4): 2287-2296, 2017 Feb 20.
Artículo en Inglés | MEDLINE | ID: mdl-28182414

RESUMEN

A minor modification of the reported procedure for the synthesis of a corrole dimer that is fused by the cyclooctatetraene (COT) unit, (H3tpfc)2COT, allowed for its isolation in 18% yield. Of the two redox isomers that this interesting macrocycle does form, the current focus is on the reduced form, in which each subunit resembles that of monomeric corroles with a trianionic N4 coordination core. The corresponding bis-gallium(III) complex was prepared as an entry into the potentially rich coordination chemistry of (H3tpfc)2COT. Both X-ray crystallography and DFT calculations disclosed that the COT moiety is essentially planar with very unusual nonalternating C-C bonds. The same holds true for the bis-gallium(III) complexes [(Ga-tpfc)2]COT(py)2 and [(Ga-tpfc)2]COT(py)4, obtained with one and two pyridine molecules coordinated to each metal ion, respectively. The electronic spectra of both the free base and the gallium(III) complexes display an extremely low energy band (λmax at 720-724 nm), which points toward extensive π delocalization through the COT bridge. This aspect was fully addressed by examining the interactions between the two corrole subunits in terms of electrochemistry and DFT calculations of the oxidized and reduced macrocycle. The new near-IR bands that appear upon both oxidation (λmax 1250 nm) and reduction (λmax 1780 nm) serve as additional supporting evidence for this conclusion.

4.
Angew Chem Int Ed Engl ; 56(33): 9837-9841, 2017 08 07.
Artículo en Inglés | MEDLINE | ID: mdl-28635035

RESUMEN

Gold corroles are not readily accessible and they display no interesting physical or chemical properties. A facile methodology has now been developed for obtaining selectively CF3 -substituted gold(III) corroles and the introduction of these groups has been found to have an immense effect on the structures of the complexes, their photophysical and redox properties, and on their ability to participate in catalytic processes.

5.
Chemistry ; 22(15): 5269-76, 2016 Apr 04.
Artículo en Inglés | MEDLINE | ID: mdl-26929001

RESUMEN

The most intriguing feature of metal-metal bonds in inorganic compounds is an apparent lack of correlation between the bond order and the bond length. In this study, we combine a variety of literature data obtained by quantum chemistry and our results based on the empirical bond valence model (BVM), to confirm for the first time the existence of a normal exponential correlation between the effective bond order (EBO) and the length of the metal-metal bonds. The difference between the EBO and the formal bond order is attributed to steric conflict between the (TM)n cluster (TM=transition metal) and its environment. This conflict, affected mainly by structural type, should cause high lattice strains, but electron redistribution around TM atoms, evident from the BVM calculations, results in a full or partial strain relaxation.

6.
Phys Chem Chem Phys ; 18(9): 6799-812, 2016 Mar 07.
Artículo en Inglés | MEDLINE | ID: mdl-26878345

RESUMEN

Ni-rich Li-based layered Ni, Co, and Mn (NCM) materials have shown tremendous promise in recent years as positive electrode materials for Li-ion batteries. This is evident as companies developing batteries for electrical vehicles are currently commercializing these materials. Despite the considerable research performed on LiNiαCoßMnγO2 systems, we do not yet have a complete atomic level understanding of these materials. In this work we study the cationic ordering, thermodynamics, and diffusion kinetics of LiNi0.5Co0.2Mn0.3O2 (NCM-523). Initially, we show that cationic ordering can be predicted employing cheap atomistic simulations, instead of using expensive first-principles methods. Subsequently, we investigate the electrochemical, thermodynamic and kinetic properties of NCM-523 using density functional theory (DFT). Our results demonstrate the importance of including dispersion corrections to standard first principles functionals in order to correctly predict the lattice parameters of layered cathode materials. We also demonstrate that a careful choice of computational protocol is essential to reproduce the experimental intercalation potential trends observed in the LiNi0.5Co0.2Mn0.3O2 electrodes. Analysis of the electronic structure confirms an active role of Ni in the electrochemical redox process. Moreover, we confirm the experimental finding that on complete delithiation, this material remains in an O3 phase, unlike LiCoO2 and NCM-333. Finally, we study various pathways for the Li-ion diffusion in NCM-523, and pinpoint the preferred diffusion channel based on first principles simulations. Interestingly, we observe that the Li diffusion barrier in NCM-523 is lower than that in LiCoO2.

7.
Phys Chem Chem Phys ; 18(2): 781-91, 2016 Jan 14.
Artículo en Inglés | MEDLINE | ID: mdl-26625981

RESUMEN

In the current work, pristine α-Fe2O3 metal oxide was doped with Mg in an attempt to modulate its electronic properties. To this end, we employed an experimental high throughput strategy, including scanning XRD and optical spectroscopy, which were complimented by atomistic density functional theory (DFT) calculations. The combined study reveals that at Mg/Fe atomic ratios up to ∼1/3, the bandgaps of the hematite-Mg composite materials are similar to that of the pure material. The observed bandgaps are rationalized by electronic band structure and density of states calculations. Additional rationale for the similar bandgaps in pure and doped hematite is provided by topological Bader charge analyses, which indicate that the Mg and Fe ions in the hematite matrix have similar partial atomic charges. Nonetheless, the small charge density difference between the Mg and Fe ions induces a slight spin polarization on both oxygen and Fe ions, resulting in changes in the band edges. Further charge density analyses, using charge density maps and chemical-bonding analyses with the crystal orbital Hamiltonian population scheme, indicate that Mg forms ionic bonds with the neighboring oxygen atoms. This change from iron-oxygen covalent bonds to a more ionic nature for magnesium-oxygen bonds is probably responsible for the reduction observed in the computed bulk modulus of α-Mg(0.17)Fe(1.83)O3 (193 GPa) compared to α-Fe2O3 (202 GPa).

8.
Phys Chem Chem Phys ; 17(46): 31202-15, 2015 Dec 14.
Artículo en Inglés | MEDLINE | ID: mdl-26548581

RESUMEN

In the current paper, we present a non-aqueous sol-gel synthesis of olivine type LiCo1-xFexPO4 compounds (x = 0.00, 0.25, 0.50, 0.75, 1.00). The magnetic properties of the olivines are measured experimentally and calculated using first-principles theory. Specifically, the electronic and magnetic properties are studied in detail with standard density functional theory (DFT), as well as by including spin-orbit coupling (SOC), which couples the spin to the crystal structure. We find that the Co(2+) ions exhibit strong orbital moment in the pure LiCoPO4 system, which is partially quenched upon substitution of Co(2+) by Fe(2+). Interestingly, we also observe a non-negligible orbital moment on the Fe(2+) ion. We underscore that the inclusion of SOC in the calculations is essential to obtain qualitative agreement with the observed effective magnetic moments. Additionally, Wannier functions were used to understand the experimentally observed rising trend in the Néel temperature, which is directly related to the magnetic exchange interaction paths in the materials. We suggest that out of layer M-O-P-O-M magnetic interactions (J⊥) are present in the studied materials. The current findings shed light on important differences observed in the electrochemistry of the cathode material LiCoPO4 compared to the already mature olivine material LiFePO4.

9.
Angew Chem Int Ed Engl ; 54(47): 14080-4, 2015 Nov 16.
Artículo en Inglés | MEDLINE | ID: mdl-26429211

RESUMEN

The future of affordable fuel cells strongly relies on the design of earth-abundant (non-platinum) catalysts for the electrochemical oxygen reduction reaction (ORR). However, the bottleneck in the overall process occurs therein. We have examined herein trivalent Mn, Fe, Co, Ni, and Cu complexes of ß-pyrrole-brominated corrole as ORR catalysts. The adsorption of these complexes on a high-surface-area carbon powder (BP2000) created a unique composite material, used for electrochemical measurements in acidic aqueous solutions. These experiments disclosed a clear dependence of the catalytic activity on the metal center of the complexes, in the order of Co>Fe>Ni>Mn>Cu. The best catalytic performance was obtained for the Co(III) corrole, whose onset potential was as positive as 0.81 V versus the reversible hydrogen electrode (RHE). Insight into the properties of these systems was gained by spectroscopic and computational characterization of the reduced and oxidized forms of the metallocorroles.

10.
J Am Chem Soc ; 135(24): 9032-40, 2013 Jun 19.
Artículo en Inglés | MEDLINE | ID: mdl-23687959

RESUMEN

The observation that (iPr3Si)(tBu3Si)Si: (1) yields an intramolecular C-H bond insertion product at room temperature, together with earlier computational predictions that triplet 1 is slightly more stable (or isoenergetic) than singlet 1 and additional considerations, led previous investigators to conclude that 1 is the first silylene to exhibit triplet electronic state reactivity. In this paper we test, using DFT and ab initio methods, whether the occurrence of intramolecular C-H bond insertion indeed indicates the presence of a triplet-state silylene. DFT calculations at the B3LYP/6-31+G(d,p)//B3LYP/6-31+G(d,p) level show that singlet (iPr3Si)(tBuMe2Si)Si: (9), a close model of singlet 1, inserts intramolecularly into a C-H bond of the tBu group with a barrier of 22.7 kcal/mol (22.2 kcal/mol at SCS-MP2/cc-PVTZ). However, for triplet9 the barrier of this insertion reaction is significantly higher, 34.6 kcal/mol (41.9 kcal/mol at SCS-MP2/cc-PVTZ). This implies that at room temperature the intramolecular insertion reaction of the singlet is 10(9)-10(12) faster than that of the triplet. We conclude, in contrast to previous conclusions, that the observed intramolecular C-H bond insertion reactions of 1 as well as of (tBu3Si)2Si: (2) occur from the singlet state. Furthermore, the occurrence of an intramolecular C-H bond insertion cannot serve as evidence for the presence of a triplet silylene, either in cases where the singlet and triplet states are nearly isoenergetic (e.g., 1 and 9) or even for silylenes where the triplet state is the ground state (e.g., 2), because the corresponding singlet silylenes insert intramolecularly much faster. The search for a genuine reaction of a triplet silylene has to continue.

11.
J Am Chem Soc ; 134(29): 11940-3, 2012 Jul 25.
Artículo en Inglés | MEDLINE | ID: mdl-22758218

RESUMEN

A 3D hybrid zinc formate framework, [NH(4)][Zn(HCOO)(3)], possessing an acs topology, shows a high degree of mechanical anisotropy and negative linear compressibility (NLC) along its c axis. High-pressure single-crystal X-ray diffraction studies and density functional theory calculations indicate that contraction of the Zn-O bonds and tilting of the formate ligands with increasing pressure induce changes in structure that result in shrinkage of the a and b axes and the NLC effect along c.

12.
J Am Chem Soc ; 131(42): 15375-86, 2009 Oct 28.
Artículo en Inglés | MEDLINE | ID: mdl-19795897

RESUMEN

The hydrothermal reactions of calcium, strontium, and barium with l-, meso-, and d,l-tartaric acid were examined from room temperature to 220 degrees C. We report the synthesis of 13 new phases and crystal structures of 11 alkaline earth tartrates, including an unusual I(3)O(0) framework, [Ba(d,l-Tar)] (Tar = C(4)H(4)O(6)(2-)), with 3-D inorganic connectivity. Each alkaline earth exhibits different phase behavior in the reactions with the three forms of tartaric acid. Calcium forms unique l-, meso-, and d,l-tartrate phases which persist to 220 degrees C. Strontium forms three unique phases at lower temperatures, but above 180 degrees C reactions with l- and d,l-tartaric acid yield the meso phase. Likewise, Ba forms three unique low-temperature phases, but above 200 degrees C reactions with l- and meso-tartaric acid yield the d,l phase. Computational and calorimetric studies of the anhydrous calcium phases, [Ca(l-Tar)] and [Ca(meso-Tar)], strontium phases, [Sr(l-Tar)] and [Sr(meso-Tar)], and barium phases, [Ba(l-Tar)] and [Ba(d,l-Tar)], were performed to determine relative phase stabilities and elucidate the role of thermodynamic and kinetic factors in controlling phase behavior. The computational and calorimetric results were in excellent agreement. The [Ca(meso-Tar)] phase was found to be 9.1 kJ/mol more stable than the [Ca(l-Tar)] phase by computation (total electronic energies) and 2.9 +/- 1.6 kJ/mol more stable by calorimetry (enthalpies of solution). The [Sr(meso-Tar)] phase was found to be 13.4 and 8.1 +/- 1.4 kJ/mol more stable than [Sr(l-Tar)] by computation and calorimetry, respectively. Finally, the [Ba(l-Tar)] phase was found to be 6.4 and 7.0 +/- 1.0 kJ/mol more stable than the [Ba(d,l-Tar)] phase. Our results suggest that the calcium and strontium meso phases are the most thermodynamically stable phases in their systems over the temperature range studied. The phase transitions are controlled by relative thermodynamic stabilities but also by a kinetic factor, likely the barrier to isomerization/racemization of the tartaric acid, which is hypothesized to preclude phase transformations at lower temperatures. In the barium system we find the [Ba(l-Tar)] phase to be the most thermodynamically stable phase at low temperatures, while the [Ba(d,l-Tar)] phase becomes the thermodynamic product at high temperatures, due to a larger entropic contribution.

13.
Chemistry ; 15(32): 7913-7921, 2009 Aug 10.
Artículo en Inglés | MEDLINE | ID: mdl-19492372

RESUMEN

The use of bifunctional chiral catalysts, which are able to simultaneously bind and activate two reacting partners, currently represents an efficient and reliable strategy for the stereoselective preparation of valuable chiral compounds. Cinchona alkaloids such as quinine and quinidine, simple organic molecules generously provided by Nature, were the first compounds to be proposed to operate through a cooperative catalysis. To date, a full mechanistic characterization of the dual catalysis mode of cinchona alkaloids has proven a challenging objective, due to the transient, non-covalent nature of the involved catalyst-substrate interactions. Here, we propose a mechanistic rationale on how natural cinchona alkaloids act as efficient bifunctional catalysts by using a broad range of computational methods, including classical molecular dynamics, a mixed quantum mechanical/molecular mechanics (QM/MM) approach, and correlated ab-initio calculations. We also unravel the origin of enantio- and diastereoselectivity, which is due to a specific network of hydrogen bonds that stabilize the transition state of the rate-determining step. The results are validated by experimental evidence.


Asunto(s)
Alcaloides de Cinchona/metabolismo , Modelos Químicos , Catálisis , Alcaloides de Cinchona/química , Conformación Molecular , Estructura Molecular , Resonancia Magnética Nuclear Biomolecular , Estereoisomerismo
14.
Dalton Trans ; 46(44): 15330-15339, 2017 Nov 14.
Artículo en Inglés | MEDLINE | ID: mdl-29068449

RESUMEN

We describe the construction of synthetically challenging heteroleptic complexes by capitalizing on the solubility properties of their corresponding favored homoleptic complexes. We demonstrate that the formation of a heteroleptic Cu2+ complex based on 2,2':6',2''-terpyridine (Terpy) and 8-hydroxyquinoline (HQ) is not possible due to the insolubility of (HQ)2Cu2+. Replacing HQ with 8-hydroxy-2-quinolinecarbonitrile (HQCN) enabled the solubility of (HQCN)2Cu2+ in acetonitrile, leading to the formation of the heteroleptic complex Terpy(HQCN)Cu2+, TQCu. Applying these conditions to the synthesis of the corresponding heteroleptic Co2+ complex resulted in TerpyCo2+(acetate)2, which is insoluble in acetonitrile. Upon changing the solvent to methanol, the carbonitrile group of HQCN was converted to carboxyimidate HQOMe yielding a heteroleptic complex Terpy(HQOMe)Co2+, TQ'Co. Using this method, we also generated the heteroleptic complex TQ'Ni and the polynuclear heteroleptic complex Q'4Q''2Mn4 (Q'' = HQO2Me). Detailed analysis of the complexes included characterization by X-ray diffraction, EPR, UV-Vis, high resolution ESI MS, DFT calculations and electrochemistry. X-ray analysis of TQCu revealed distorted square pyramidal geometry, while TQ'Co and TQ'Ni exhibit distorted octahedral geometry, which includes metal coordination via the carboxyimidate nitrogen site. Interestingly, Q'4Q''2Mn4 was found to contain a [Mn(µ3-O)2(µ2-O)4N10]2+ core, which adopts a distorted octahedral geometry, and two types of HQ chelators. Thus, Q'4Q''2Mn4 is also heteroleptic even though it does not contain a Terpy ligand. Solution studies revealed that while TQCu is stable in solution, TQ'Co and TQ'Ni go through ligand exchange and are partially converted to their corresponding homoleptic complexes. Based on these data we could propose a mechanism for the formation of TQ'Co and TQ'Ni and show that TQ'Co can be prepared directly from Terpy and HQOMe.

16.
J Chem Theory Comput ; 11(1): 64-72, 2015 Jan 13.
Artículo en Inglés | MEDLINE | ID: mdl-26574204

RESUMEN

First-principles density functional theory (DFT) and a many-body Green's function method have been employed to elucidate the electronic, magnetic, and photonic properties of a spinel compound, Co3O4. Co3O4 is an antiferromagnetic semiconductor composed of cobalt ions in the Co(2+) and Co(3+) oxidation states. Co3O4 is believed to be a strongly correlated material, where the on-site Coulomb interaction (U) on Co d orbitals is presumably important, although this view has recently been contested. The suggested optical band gap for this material ranges from 0.8 to 2.0 eV, depending on the type of experiments and theoretical treatment. Thus, the correlated nature of the Co d orbitals in Co3O4 and the extent of the band gap are still under debate, raising questions regarding the ability of DFT to correctly treat the electronic structure in this material. To resolve the above controversies, we have employed a range of theoretical methods, including pure DFT, DFT+U, and a range-separated exchange-correlation functional (HSE06) as well as many-body Green's function theory (i.e., the GW method). We compare the electronic structure and band gap of Co3O4 with available photoemission spectroscopy and optical band gap data and confirm a direct band gap of ca. 0.8 eV. Furthermore, we have also studied the optical properties of Co3O4 by calculating the imaginary part of the dielectric function (Im(ε)), facilitating direct comparison with the measured optical absorption spectra. Finally, we have calculated the nearest-neighbor interaction (J1) between Co(2+) ions to understand the complex magnetic structure of Co3O4.

17.
Chem Commun (Camb) ; 50(87): 13292-5, 2014 Nov 11.
Artículo en Inglés | MEDLINE | ID: mdl-25232700

RESUMEN

Upon heating, lithium L-malate undergoes topotactic dehydration to form a phase containing the unsaturated fumarate ligand, in which the original 3-D framework remains intact. Insight into this unusual transformation has been obtained by single crystal X-ray diffraction, MAS-NMR, in situ powder X-ray diffraction and DFT calculations.

19.
J Chem Theory Comput ; 2(4): 956-64, 2006 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-26633055

RESUMEN

A theoretical quantum-mechanical study of trisilaallene, H2Si [Formula: see text] Si [Formula: see text] SiH2, and of 15 other Si3H4 isomers was carried out using ab initio and DFT methods with a variety of basis sets. Values given below are at B3LYP/6-31G(d,p). Unlike H2C [Formula: see text] C [Formula: see text] CH2 which is linear, H2Si [Formula: see text] Si [Formula: see text] SiH2 is highly bent at the central silicon atom, with a SiSiSi bending angle of 69.4°. The Si [Formula: see text] Si bond length is 2.269 Å, longer than a regular Si [Formula: see text] Si double bond (2.179 Å) but shorter than a Si-Si single bond (2.351 Å). The distance between the terminal silicon atoms is 2.583 Å, significantly longer than a Si-Si single bond. The geometry and electronic properties of H2Si [Formula: see text] Si [Formula: see text] SiH2 are similar to those of the corresponding trisilacyclopropylidene, which is only 2.7 kcal/mol higher in energy. A barrier of only 0.1 kcal/mol separates trisilacyclopropylidene and trisilaallene which can be described as bond-stretch isomers. Sixteen minima were located on the Si3H4 PES, most of them within a narrow energy range of ca. 10 kcal/mol. Six of the Si3H4 isomers are analogous to the classic C3H4 minima structures; however, the other Si3H4 isomers do not have carbon analogues, and they are characterized by hydrogen-bridged structures.

20.
J Am Chem Soc ; 126(34): 10544-5, 2004 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-15327304

RESUMEN

A theoretical prescription as to how to design allenic-type linear trisilaallenes and trigermaallenes is provided. Until now, all of the heavier group - 14 analogues of allene were found to be bent, unlike allene itself. DFT calculations show that linear trisilaallenes and trigermaallenes can be designed by using boryl substituents, e.g., (R2B)2E=E=E(BR2)2 (E = Si, Ge). With cyclic boryl substituents the calculated systems may be synthetically accessible.

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