Nonrigid Medical Image Registration Using an Information Theoretic Measure Based on Arimoto Entropy with Gradient Distributions.

This paper introduces a new nonrigid registration approach for medical images applying an information theoretic measure based on Arimoto entropy with gradient distributions. A normalized dissimilarity measure based on Arimoto entropy is presented, which is employed to measure the independence between two images. In addition, a regularization term is integrated into the cost function to obtain the smooth elastic deformation. To take the spatial information between voxels into account, the distance of gradient distributions is constructed. The goal of nonrigid alignment is to find the optimal solution of a cost function including a dissimilarity measure, a regularization term, and a distance term between the gradient distributions of two images to be registered, which would achieve a minimum value when two misaligned images are perfectly registered using limited-memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS) optimization scheme. To evaluate the test results of our presented algorithm in non-rigid medical image registration, experiments on simulated three-dimension (3D) brain magnetic resonance imaging (MR) images, real 3D thoracic computed tomography (CT) volumes and 3D cardiac CT volumes were carried out on elastix package. Comparison studies including mutual information (MI) and the approach without considering spatial information were conducted. These results demonstrate a slight improvement in accuracy of non-rigid registration.

PET and MRI image fusion based on a dense convolutional network with dual attention.

The fusion techniques of different modalities in medical images, e.g., Positron Emission Tomography (PET) and Magnetic Resonance Imaging (MRI), are increasingly significant in many clinical applications by integrating the complementary information from different medical images. In this paper, we propose a novel fusion model based on a dense convolutional network with dual attention (CSpA-DN) for PET and MRI images. In our framework, an encoder composed of the densely connected neural network is constructed to extract features from source images, and a decoder network is employed to generate the fused image from these features. Simultaneously, a dual-attention module is introduced in the encoder and decoder to further integrate local features along with their global dependencies adaptively. In the dual-attention module, a spatial attention block is leveraged to extract features of each point from encoder network by a weighted sum of feature information at all positions. Meanwhile, the interdependent correlation of all image features is aggregated via a module of channel attention. In addition, we design a specific loss function including image loss, structural loss, gradient loss and perception loss to preserve more structural and detail information and sharpen the edges of targets. Our approach facilitates the fused images to not only preserve abundant functional information from PET images but also retain rich detail structures of MRI images. Experimental results on publicly available datasets illustrate the superiorities of CSpA-DN model compared with state-of-the-art methods according to both qualitative observation and objective assessment.

Lightweight and efficient neural network with SPSA attention for wheat ear detection.

Advancements in deep neural networks have made remarkable leap-forwards in crop detection. However, the detection of wheat ears is an important yet challenging task due to the complex background, dense targets, and overlaps between wheat ears. Currently, many detectors have made significant progress in improving detection accuracy. However, some of them are not able to make a good balance between computational cost and precision to meet the needs of deployment in real world. To address these issues, a lightweight and efficient wheat ear detector with Shuffle Polarized Self-Attention (SPSA) is proposed in this paper. Specifically, we first utilize a lightweight backbone network with asymmetric convolution for effective feature extraction. Next, SPSA attention is given to adaptively select focused positions and produce a more discriminative representation of the features. This strategy introduces polarized self-attention to spatial dimension and channel dimension and adopts Shuffle Units to combine those two types of attention mechanisms effectively. Finally, the TanhExp activation function is adopted to accelerate the inference speed and reduce the training time, and CIOU loss is used as the border regression loss function to enhance the detection ability of occlusion and overlaps between targets. Experimental results on the Global Wheat Head Detection dataset show that our method achieves superior detection performance compared with other state-of-the-art approaches.

SeedSortNet: a rapid and highly effificient lightweight CNN based on visual attention for seed sorting.

Seed purity directly affects the quality of seed breeding and subsequent processing products. Seed sorting based on machine vision provides an effective solution to this problem. The deep learning technology, particularly convolutional neural networks (CNNs), have exhibited impressive performance in image recognition and classification, and have been proven applicable in seed sorting. However the huge computational complexity and massive storage requirements make it a great challenge to deploy them in real-time applications, especially on devices with limited resources. In this study, a rapid and highly efficient lightweight CNN based on visual attention, namely SeedSortNet, is proposed for seed sorting. First, a dual-branch lightweight feature extraction module Shield-block is elaborately designed by performing identity mapping, spatial transformation at higher dimensions and different receptive field modeling, and thus it can alleviate information loss and effectively characterize the multi-scale feature while utilizing fewer parameters and lower computational complexity. In the down-sampling layer, the traditional MaxPool is replaced as MaxBlurPool to improve the shift-invariant of the network. Also, an extremely lightweight sub-feature space attention module (SFSAM) is presented to selectively emphasize fine-grained features and suppress the interference of complex backgrounds. Experimental results show that SeedSortNet achieves the accuracy rates of 97.33% and 99.56% on the maize seed dataset and sunflower seed dataset, respectively, and outperforms the mainstream lightweight networks (MobileNetv2, ShuffleNetv2, etc.) at similar computational costs, with only 0.400M parameters (vs. 4.06M, 5.40M).

Electrically Conducting Hydrogel Graphene Nanocomposite Biofibers for Biomedical Applications.

Conductive biomaterials have recently gained much attention, specifically owing to their application for electrical stimulation of electrically excitable cells. Herein, flexible, electrically conducting, robust fibers composed of both an alginate biopolymer and graphene components have been produced using a wet-spinning process. These nanocomposite fibers showed better mechanical, electrical, and electrochemical properties than did single fibers that were made solely from alginate. Furthermore, with the aim of evaluating the response of biological entities to these novel nanocomposite biofibers, in vitro studies were carried out using C2C12 myoblast cell lines. The obtained results from in vitro studies indicated that the developed electrically conducting biofibers are biocompatible to living cells. The developed hybrid conductive biofibers are likely to find applications as 3D scaffolding materials for tissue engineering applications.