Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3).

Fidaxomicin is an antibacterial drug in clinical use for treatment of Clostridium difficile diarrhea. The active ingredient of fidaxomicin, lipiarmycin A3 (Lpm), functions by inhibiting bacterial RNA polymerase (RNAP). Here we report a cryo-EM structure of Mycobacterium tuberculosis RNAP holoenzyme in complex with Lpm at 3.5-Å resolution. The structure shows that Lpm binds at the base of the RNAP "clamp." The structure exhibits an open conformation of the RNAP clamp, suggesting that Lpm traps an open-clamp state. Single-molecule fluorescence resonance energy transfer experiments confirm that Lpm traps an open-clamp state and define effects of Lpm on clamp dynamics. We suggest that Lpm inhibits transcription by trapping an open-clamp state, preventing simultaneous interaction with promoter -10 and -35 elements. The results account for the absence of cross-resistance between Lpm and other RNAP inhibitors, account for structure-activity relationships of Lpm derivatives, and enable structure-based design of improved Lpm derivatives.

Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition.

Mycobacterium tuberculosis (Mtb) is the causative agent of tuberculosis, which kills 1.8 million annually. Mtb RNA polymerase (RNAP) is the target of the first-line antituberculosis drug rifampin (Rif). We report crystal structures of Mtb RNAP, alone and in complex with Rif, at 3.8-4.4 Å resolution. The results identify an Mtb-specific structural module of Mtb RNAP and establish that Rif functions by a steric-occlusion mechanism that prevents extension of RNA. We also report non-Rif-related compounds-Nα-aroyl-N-aryl-phenylalaninamides (AAPs)-that potently and selectively inhibit Mtb RNAP and Mtb growth, and we report crystal structures of Mtb RNAP in complex with AAPs. AAPs bind to a different site on Mtb RNAP than Rif, exhibit no cross-resistance with Rif, function additively when co-administered with Rif, and suppress resistance emergence when co-administered with Rif.

Photoisomerization and Light-Controlled Antibacterial Activity of Fluoroquinolone-Azoisoxazole Hybrids.

Photopharmacology holds a huge untapped potential to locally treat diseases involving photoswitchable drugs via the elimination of drugs' off-target effects. The growth of this field has created a pressing demand to develop such light-active drugs. We explored the potential for creating photoswitchable antibiotic hybrids by attaching pharmacophores norfloxacin/ciprofloxacin and azoisoxazole (photoswitch). All compounds exhibited a moderate to a high degree of bidirectional photoisomerization, long thermal cis half-lives, and impressive photoresistance. Gram-negative pathogens were found to be insensitive to these hybrids, while against Gram-positive pathogens, all hybrids in their trans states exhibited antibacterial activity that is comparable to that of the parent drugs. Notably, the toxicity of the irradiated hybrid 6 was found to be 2-fold lower than the nonirradiated trans isomer, indicating that the pre-inactivated cis-enriched drug can be employed for the site-specific treatment of bacterial infection using light, which could potentially eliminate the unwanted exposure of toxic antibiotics to both beneficial and untargeted harmful microbes in our body. Molecular docking revealed different binding affinity of the cis and trans isomers with the topoisomerase IV enzyme, due to their different shapes.

Photoswitchable Antibiotic Hybrids: Spacer Length-Dependent Photochemical Control of Antibacterial Activity.

Photopharmacology holds huge potential for the permanent (long-term) eradication of antibiotic resistance by the application of photoswitchable antibiotics. To construct such antibiotics, various methods have been employed to modify known antibiotics with photoswitches, such that the irradiated state shows activity comparable to or higher than that of the parent antibiotic and that a large activity difference between irradiated and nonirradiated states is achieved. However, most of those methods are ineffective when dealing with more than one drug with dissimilar structures. Here, we have demonstrated a new approach, in which two pharmacophores, one being a photoswitch, are covalently linked via a spacer of variable lengths, leading to a set of azopyrazole-norfloxacin antibiotic hybrids. All compounds showed a high degree of bidirectional photoisomerization, long thermal cis half-lives, and excellent photoresistance. Notably, the hybrid with an optimal four-carbon spacer length enabled the irradiated state to become 12-fold more potent than its nonirradiated state without losing much antimicrobial activity of norfloxacin. Only Gram-positive bacteria were found to be sensitive to this hybrid, and the full antibacterial potency of its irradiated state was found to be retained for nearly 24 h.

Surface Engineering of Atomically Precise M(I) Nanoclusters: From Structural Control to Room Temperature Photoluminescence Enhancement.

ConspectusUnderstanding the structural architecture of nanoparticles is essential for investigating their fundamental properties because these materials have become more desirable in modern nanoscience research. Designing a proper synthetic strategy to control their growth with atomic precision is crucial. The polydispersed nature of the nanoparticles makes determining their precise structural information challenging. Metal nanoclusters (NCs) have emerged as a promising solution to this problem as they bridge the gap between metal nanoparticles and discrete molecular complexes. Well-ordered molecular structures provide opportunities to look at structure-property correlations and find quantum confinement effects at the atomic level that reveal their similarity to molecular-like properties. While most M(0)/(I)-based NCs exhibit exceptional photoluminescence (PL) emission at room temperature, M(I)-based NCs are less likely to exhibit PL emissions due to their electronic environment. Developments in the field of metal nanoparticles have made it intriguing to achieve room-temperature PL emission in M(I) NCs. Efforts have focused on developing efficient methods for preparing luminescent M(I) NCs to better comprehend fundamental aspects of their PL emission properties. We provide an overview of various synthetic strategies for preparing NCs and their selective functionalization for generating room-temperature PL emissions. Our focus has been creating an Ag(I) NC with a core-shell architecture, as this unique structural design complements the charge transition phenomenon. The molecular structure obtained from single-crystal X-ray diffraction (SCXRD) and associated theoretical calculation revealed that our effort results in a unique hexagonal closed pack core and Keplerate shell containing [S@Ag50S12(StBu)20]4+ NC where the charge transition between the core and the metal-ligand shell facilitates emission properties. We also explored the approach of host-guest supramolecular adduct formations to engineer the surface of ligands that reduce nonradiative relaxation rates by restricting surface molecular vibrations and controlling the generation of PL emission. To do this, we capped precisely structured [Cl@Ag16S(S-Adm)8(CF3COO)5(DMF)3(H2O)2]·DMF with ß-cyclodextrin via adamantane moieties. We also describe the effects of bimetallic cluster formation on increasing surface rigidity and modulating the frontier molecular orbital arrangement, which helps to attain synergy to generate room-temperature PL emission. We focused on the structural integrity of Ag(I) NCs, allowing us to incorporate heterometal atoms at peripheral positions that lead to the formation of [CO2@Ag20Cu2S2(StBu)10(CF3COO)8(DMA)4]·(DMA). We also explored the impact of introducing extra ligands into the Ag(I) cluster node on the generation of PL emission at room-temperature. These strategies are not limited to Ag NCs. We discussed the possibility of combining core-shell architecture and surface modifications to enhance PL emission in [Cu18H3(S-Adm)12(PPh3)4Cl2] NC at room temperature. SCXRD studies revealed its distinct core-shell architecture that ensures electronic transitions and that transition is controlled by the imposed surface rigidity that yields a higher PL emission. We believe that this innovative structural engineering holds potential for the advancement of NC research, and this Account will inspire the scientific community to synthesize functional M(I) NCs.

Direct Growth Control of Antibiotic-Resistant Bacteria Using Visible-Light-Responsive Novel Photoswitchable Antibiotics.

In addition to the discovery of new (modified) potent antibiotics to combat antibiotic resistance, there is a critical need to develop novel strategies that would restrict their off-target effects and unnecessary exposure to bacteria in our body and environment. We report a set of new photoswitchable arylazopyrazole-modified norfloxacin antibiotics that present a high degree of bidirectional photoisomerization, impressive fatigue resistance and reasonably high cis half-lives. The irradiated isomers of most compounds were found to exhibit nearly equal or higher antibacterial activity than norfloxacin against Gram-positive bacteria. Notably, against norfloxacin-resistant S. aureus bacteria, the visible-light-responsive p-SMe-substituted derivative showed remarkably high antimicrobial potency (MIC of 0.25 µg/mL) in the irradiated state, while the potency was reduced by 24-fold in case of its non-irradiated state. The activity was estimated to be retained for more than 7 hours. This is the first report to demonstrate direct photochemical control of the growth of antibiotic-resistant bacteria and to show the highest activity difference between irradiated and non-irradiated states of a photoswitchable antibiotic. Additionally, both isomers were found to be non-harmful to human cells. Molecular modellings were performed to identify the underlying reason behind the high-affinity binding of the irradiated isomer to topoisomerase IV enzyme.

Unveiling growth-promoting attributes of peanut root endophyte Micromonospora sp.

In this study, 20 endophytic actinobacteria were isolated from different parts of peanut plants growing in cropland with low and high salt in West Bengal, India. The endophytes underwent a rigorous morphological, biochemical, and genetic screening process to evaluate their effectiveness in enhancing plant growth. About 20% of these isolates were identified as potential plant growth-promoting endophytic actinobacteria, which showed high 16S rRNA gene sequence similarity (up to 99-100%) with different species of Micromonospora. Among these isolates, Micromonospora sp. ASENR15 produced the highest levels of indole acetic acid (IAA) and gibberellic acid (GA), while Micromonospora sp. ASENL2, Micromonospora sp. ANENR4, and Micromonospora sp. ASENR12 produced the highest level of siderophore. Among these leaf and root endophytic Micromonospora, strain ANENR4 was tested for its plant growth-promoting attributes. ANENR4 can be transmitted into the roots of a healthy peanut plant, enhances growth, and colonize the roots in abundance, suggesting the potential agricultural significance of the strain. Moreover, the study is the first report of endophytic Micromonospora in peanuts with PGP effects. The outcomes of this study open avenues for further research on harnessing the benefits of this endophytic Micromonospora for optimizing plant growth in agriculture.

Endophytic Streptomyces sp. MSARE05 isolated from roots of Peanut plant produces a novel antimicrobial compound.

AIM: This study aimed to isolate, endophytic Streptomyces sp. MSARE05 isolated from root of a peanut (Arachis hypogaea) inhibits the growth of other bacteria. The research focused on characterizing the strain and the antimicrobial compound. METHODS AND RESULTS: The surface-sterilized peanut roots were used to isolate the endophytic bacterium Streptomyces sp. MSARE05. A small-scale fermentation was done to get the antimicrobial compound SM05 produced in highest amount in ISP-2 medium (pH 7) for 7 days at 30°C in shaking (180 rpm) condition. Extraction, purification, and chemical analysis of the antibacterial component revealed a novel class of antibiotics with a 485.54 Dalton molecular weight. The MIC was 0.4-0.8 µg ml-1 against the tested pathogens. It also inhibits multidrug-resistant (MDR) pathogens and Mycobacterium with 0.8-3.2 µg ml-1 MIC. SM05 was found to disrupt cell membrane of target pathogen as evident by significant leakage of intracellular proteins and nucleic acids. It showed synergistic activity with ampicillin, chloramphenicol, streptomycin, and kanamycin. CONCLUSIONS: The new-class antimicrobial SM05 consisting naphthalene core moiety was effective against drug-resistant pathogens but non-cytotoxic to human cells. This study underscores the significance of endophytic Streptomyces as a source of innovative antibiotics, contributing to the ongoing efforts to combat antibiotic resistance.

Impact of Rhizospheric Microbiome on Rice Cultivation.

The rhizosphere niche is extremely important for the overall growth and development of plants. Evidently, it is necessary to understand the complete mechanism of plant microbe interactions of the rhizosphere for sustainable and low input productivity. To meet the increasing global food demand, rice (Oryza sativa L.) agriculture seeks optimal conditions. The unique oxic-anoxic interface of rice-growing soil has invited divergent microbes with dynamic biogeochemical cycles. This review provides the systematic analysis of microbes associated with the major biogeochemical cycles with the aim to generate better management strategies of rhizospheric microbiome in the field of rice agriculture. For instance, several methanogenic and methanotrophic bacteria in the rice rhizosphere make an equilibrium for methane concentration in the environment. The carbon sequestration in paddy soil is again done through many rhizospheric microorganisms that can directly assimilate CO2 with their photoautotrophic mode of nutrition. Also the phosphate solubilizing microbes remain to be the most important keys for the PGPR activity of the paddy ecosystem. In addition, rhizospheric microbiome remain crucial in degradation and solubilization of organo-sulfur and insoluble inorganic sulfides which can be taken by the plants. Further, this review elucidates on the advantages of using metagenomic and metaproteomic approaches as an alternative of traditional approaches to understand the overall metabolic pathways operational in paddy-field. These knowledges are expected to open new possibilities for designing the balanced microbiome used as inoculum for intensive farming and will eventually lead to exert positive impacts on rice cultivation.

Two-Dimensional Silver-Chalcogenolate-Based Cluster-Assembled Material: A p-type Semiconductor.

We have synthesized and characterized a new two-dimensional honeycomb architecture resembling a single-layer of atomically precise silver cluster-assembled material (CAM), [Ag12(StBu)6(CF3COO)6(4,4'-azopyridine)3] (Ag12-azo-bpy). The interlayer noncovalent van der Waals interactions within the single-crystals were successfully disrupted, leading to the creation of this unique structure. The optimized Ag12-azo-bpy CAM demonstrates a valence band that is localized on the Ag12 cluster node situated near the Fermi energy level. This localization induces electron injection from the linker to the cluster node, facilitating efficient charge transportation along the plane. Exploiting this single-layer structure as a distinctive platform for p-type channel material, it was employed in a field-effect transistor configuration. Remarkably, the transistor exhibits a high hole mobility of 1.215 cm2 V-1 s-1 and an impressive ON/OFF current ratio of ∼4500 at room-temperature.

Inter-species interaction of bradyrhizobia affects their colonization and plant growth promotion in Arachis hypogaea.

Bradyrhizobia are the principal symbiotic partner of the leguminous plant and take active part in biological nitrogen-fixation. The present investigation explores the underlying competition among different strains during colonization in host roots. Six distinct GFP and RFP-tagged Bradyrhizobium strains were engineered to track them inside the peanut roots either independently or in combination. The Bradyrhizobium strains require different time-spans ranging from 4 to 21 days post-infection (dpi) for successful colonization which further varies in presence of another strain. While most of the individual strains enhanced the shoot and root dry weight, number of nodules, and nitrogen fixation capabilities of the host plants, no significant enhancement of plant growth and nodulation efficiency was observed when they were allowed to colonize in combinations. However, if among the combinations one strains is SEMIA 6144, the co-infection results in higher growth and nodulation efficiency of the hosts. From the competition experiments it has been found that Bradyrhizobium japonicum SEMIA 6144 was found to be the most dominant strain for effective nodulation in peanut. The extent of biofilm and exopolysaccharide (EPS) production by these isolates, individually or in combinations, were envisaged to correlate whether these parameters have any impact on the symbiotic association. But the extent of colonization, growth-promotion and nitrogen-fixation ability drastically lowered when a strain present together with other Bradyrhizobium strain. Therefore, it is imperative to understand the interaction between two co-inoculating Bradyrhizobium species for nodulation followed by plant growth promotion to develop suitable consortia for enhancing BNF in peanut and possibly for other legumes.

Modulation of Singlet-Triplet Gap in Atomically Precise Silver Cluster-Assembled Material.

Silver cluster-based solids have garnered considerable attention owing to their tunable luminescence behavior. While surface modification has enabled the construction of stable silver clusters, controlling interactions among clusters at the molecular level has been challenging due to their tendency to aggregate. Judicious choice of stabilizing ligands becomes pivotal in crafting a desired assembly. However, detailed photophysical behavior as a function of their cluster packing remained unexplored. Here, we modulate the packing pattern of Ag12 clusters by varying the nitrogen-based ligand. CAM-1 formed through coordination of the tritopic linker molecule and NC-1 with monodentate pyridine ligand; established via non-covalent interactions. Both the assemblies show ligand-to-metal-metal charge transfer (LMMCT) based cluster-centered emission band(s). Temperature-dependent photoluminescence spectra exhibit blue shifts at higher temperatures, which is attributed to the extent of the thermal reverse population of the S1 state from the closely spaced T1 state. The difference in the energy gap (ΔEST ) dictated by their assemblies played a pivotal role in the way that Ag12 cluster assembly in CAM-1 manifests a wider ΔEST and thus requires higher temperatures for reverse intersystem crossing (RISC) than assembly of NC-1. Such assembly-defined photoluminescence properties underscore the potential toolkit to design new cluster- assemblies with tailored optoelectronic properties.

Experimental and Theoretical Exploration of ESIPT in a Systematically Constructed Series of Benzimidazole Based Schiff Base Probes: Application as Chemosensors.

Herein, we have utilized 2-(2-hydroxyphenyl)benzimidazole (HBI) to synthesize 3-(1H-benzoimidazol-2-yl)-2-hydroxy-5-methyl-benzaldehyde (HBIA) followed by three Schiff bases by using -ortho (H2 BIo), -meta (H3 BIdm) and -para (H2 BIp) substituted amino benzoic acids and studied their photophysical properties. We have successfully derived molecular structures of HBI, HBIA and H3 BIdm which reveals that in HBI and HBIA, the phenolic -OH is intramolecularly hydrogen bonded with sp2 N of benzimidazole group whereas in H3 BIdm, it is hydrogen bonded with imine C=N of Schiff base moiety, which is responsible for different solid state emission properties of the reported compounds. Extensive experimental and theoretical studies show that for all three Schiff bases, in solution due to activation of C=N isomerization, ESIPT operates through benzimidazole site and displays different emission from the solid state. Furthermore, H2 BIo, H3 BIdm and H2 BIp selectively sense Cu2+ in semi aqueous medium with nano-molar detection limit and in HuH-7 cells through the inhibition of ESIPT of process.

Inter-Network Charge-Transfer Excited State Formation Within a Two-fold Catenated Metal-Organic Framework.

Charge-transfer excited state (CTES) defines the ability to split photon energy into work producing redox equivalents suitable for photocatalysis. Here, we report inter-net CTES formation within a two-fold catenated crystalline metal-organic framework (MOF), constructed with two linkers, N,N'-di(4-pyridyl)-1,4,5,8-naphthalenetetracarboxydiimide (DPNDI) and 2,6-dicarboxynaphthalene (NDC). The structural flexibility puts two complementary linkers from two nets in a proximal position to interact strongly. Supported by the electrochemical and steady-state electronic spectroscopic data, this ground-state interaction facilitates forming CTES that can be populated by direct excitation. We map the dynamics of the CTES which persists over a few nanoseconds and highlight the utilities of such relatively long-lived CTES as enhanced conductivity of the MOF under light over that measured in dark and as a proof-of-the-principle test, photo-reduction of methyl viologen under white light.

Immobilization of Gold Nanoparticles on Postsynthetically Modified NU-1000 for Hydrogen Evolution Reaction.

NU-1000, being a hydrothermally stable metal-organic framework (MOF), with structural robustness is viable for functionalization with various entities. A postsynthetic modification strategy called solvent-assisted ligand incorporation (SALI) is chosen for functionalizing NU-1000 with thiol moieties using 2-mercaptobenzoic acid. In accordance with soft acid-soft base interactions, the thiol groups on NU-1000, as a scaffold, can immobilize the gold nanoparticles without much aggregation. The catalytically active gold sites on thiolated NU-1000 are utilized for hydrogen evolution reaction (HER). The catalyst delivered an overpotential of 101 mV at a current density of 10 mAcm-2 in 0.5 M H2SO4. The faster charge transfer kinetics determined from the Tafel slope of 44 mV/dec enhances the HER activity. The sustainable performance of the catalyst for 36 h proves its utility as a potential catalyst to produce neat hydrogen.

Photoluminescence Properties of a Chiral One-Dimensional Silver Chalcogenolate Chain.

Atom-precise metal nanoclusters, which contain a few tens to hundreds of atoms, have drawn significant interest due to their interesting physicochemical properties. Structural analysis reveals a fundamental architecture characterized by a central core or kernel linked to a staple motif with metal-ligand bonding playing a pivotal role. Ligands not only protect the surface but also exert a significant influence in determining the overall assembly of the larger superstructures. The assemblies of nanoclusters are driven by weak interaction between the ligand molecules; it also depends on the ligand type and functional group present. Here, we report an achiral ligand and Ag(I)···Ag(I) interaction-driven spontaneous resolution of silver-thiolate structure, [Ag18(C6H11S)12(CF3COO)6(DMA)2], where silver atoms and cyclohexanethiolate are connected to form a one-dimensional chain with helicity. Notably, silver atoms adopt different types of coordination modes and geometries. The photoluminescence properties of the one-dimensional (1D) chain structure were investigated, and it was found to exhibit excitation-dependent emission properties attributed to hydrogen-bonding interactions. Experimental and theoretical investigations corroborate the presence of triplet-emitting ligand-to-metal charge-transfer transitions.

The New Ag-S Cluster [Ag50S13(StBu)20][CF3COO]4 with a Unique hcp Ag14 Kernel and Ag36 Keplerian-Shell-Based Structural Architecture and Its Photoresponsivity.

In metal nanoclusters (NCs), the kernel geometry and the nature of the surface protecting ligands are very crucial for their structural stability and properties. The synthesis and structural elucidation of Ag NCs is challenging because the zerovalent oxidation state of Ag is very reactive and prone to oxidization. Here, we report the NC [Ag50S13(StBu)20][CF3COO]4 with a hexagonal close-packed (hcp) cagelike Ag14 kernel. A truncated cubic shell and an octahedral shell encapsulate the hcp-layered kernel via an interstitial S2- anionic shell to form an Ag36 Keplerian outer shell of the NC. A theoretical study indicates the stability of this NC in its 4+ charge state and the charge distribution between the kernel and Keplerian shell. The unprecedented electronic structure facilitates its application toward sustainable photoresponse properties. The new insights into this novel Ag NC kernel and Keplerian shell structure may pave the way to understanding the unique structure and developing electronic structure-based applications.

Influence of Molecular Separation on Through-Space Intervalence Transient Charge Transfer in Metal-Organic Frameworks with Cofacially arranged Redox Pairs.

We demonstrate direct evidence of photoinduced through-space intervalence charge transfer (IVCT) between two cofacially arranged redox-active pairs in metal-organic frameworks and their dynamic variation with their molecular separation. Two homologous MOFs [Co2 (NDC)2 (DPTTZ)2 ]. DPTTZ. DMF, 1 and [Co2 (BDC)2 (DPTTZ)2 ]. DMF, 2 (where NDC=naphthalene dicarboxylate, BDC=benzene dicarboxylate, DPTTZ=N, N'-di(4-pyridyl)thiazolo-[5,4-d]thiazole, DMF=N, N'-dimethyl formamide) are considered for this, whose intra-dimer distance of redox-active DPTTZ ligands differs ca. 1 Šfrom one system to another. Spectroelectrochemical study detects the formation of IVCT band at the NIR region between cofacially oriented DPTTZ molecules in both MOFs. Transient spectroscopy shows faster charge separation as well as charge recombination when intra-dimer distance is lesser (in MOF 2) due to stronger electronic coupling. We quantify the extent of IVCT by charge transfer integral calculation; and also by optical pump terahertz probe spectroscopy, where MOF 2 shows three times higher carrier mobility due to lesser inter-DPTTZ distance than MOF 1. These findings reveal a more localized aspect of through-space IVCT between cofacially organized redox-active pair in a three-dimensional framework.

Electrocatalytic Reduction of Nitrogen to Ammonia Using Tiara-like Phenylethanethiolated Nickel Cluster.

The fixing of N2 to NH3 is challenging due to the inertness of the N≡N bond. Commercially, ammonia production depends on the energy-consuming Haber-Bosch (H-B) process, which emits CO2 while using fossil fuels as the sources of hydrogen and energy. An alternative method for NH3 production is the electrochemical nitrogen reduction reaction (NRR) process as it is powered by renewable energy sources. Here, we report a tiara-like nickel-thiolate cluster, [Ni6 (PET)12 ] (where, PET=2-phenylethanethiol)] as an efficient electro-catalyst for the electrochemical NRR at ambient conditions. Ammonia (NH3 : 16.2±0.8 µg h-1 cm-2 ) was the only nitrogenous product over the potential of -2.3 V vs. Fc + /Fc with a Faradaic efficiency of 25%±1.7. Based on theoretical calculations, NRR by [Ni6 (PET)12 ] proceeds through both the distal and alternating pathways with an onset potential of -1.84 V vs. RHE (i.e., -2.46 V vs. Fc + /Fc ) which corroborates with the experimental findings.

Crystal Packing-Driven Selective Hg(II) Ion Sensing Using Thiazolothiazole-Based Water-Stable Zinc Metal-Organic Framework.

A soft acid-soft base interaction is highly predictable. However, we demonstrate how the crystal packing of the newly synthesized zinc framework [Zn2(5-AIA)2(DPTTZ)]·DMF (where 5-AIA = 5-aminoisophthalic acid, DPTTZ = N,N'-di(4-pyridyl)thiazolo-[5,4-d]thiazole, DMF = N,N'-dimethylformamide) directs an unexpected interaction between the soft acid Hg(II) and the hard base oxygen instead of having a soft center like nitrogen and sulfur in the system attributed to a strong solvent interaction and a favorable ionic radius of Hg(II) ion for oxygen chelation. This engenders selective Hg(II) ion sensing through a "turn-off" emission quenching in water (limit of detection = (2.174 ± 0.06) × 10-9 M) along with natural water resources and in a broad pH range. A quantum-chemical calculation elucidates the turn-off quenching mechanism and favorable Hg(II) interaction with encompassed oxygen atoms inside the framework.