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1.

High-throughput phenotyping reveals expansive genetic and structural underpinnings of immune variation.

Abeler-Dörner, Lucie; Laing, Adam G; Lorenc, Anna; Ushakov, Dmitry S; Clare, Simon; Speak, Anneliese O; Duque-Correa, Maria A; White, Jacqueline K; Ramirez-Solis, Ramiro; Saran, Namita; Bull, Katherine R; Morón, Belén; Iwasaki, Jua; Barton, Philippa R; Caetano, Susana; Hng, Keng I; Cambridge, Emma; Forman, Simon; Crockford, Tanya L; Griffiths, Mark; Kane, Leanne; Harcourt, Katherine; Brandt, Cordelia; Notley, George; Babalola, Kolawole O; Warren, Jonathan; Mason, Jeremy C; Meeniga, Amrutha; Karp, Natasha A; Melvin, David; Cawthorne, Eleanor; Weinrick, Brian; Rahim, Albina; Drissler, Sibyl; Meskas, Justin; Yue, Alice; Lux, Markus; Song-Zhao, George X; Chan, Anna; Ballesteros Reviriego, Carmen; Abeler, Johannes; Wilson, Heather; Przemska-Kosicka, Agnieszka; Edmans, Matthew; Strevens, Natasha; Pasztorek, Markus; Meehan, Terrence F; Powrie, Fiona; Brinkman, Ryan; Dougan, Gordon.

Nat Immunol; 21(1): 86-100, 2020 01.

Artículo en Inglés | MEDLINE | ID: mdl-31844327

2.

High-throughput mouse phenomics for characterizing mammalian gene function.

Brown, Steve D M; Holmes, Chris C; Mallon, Ann-Marie; Meehan, Terrence F; Smedley, Damian; Wells, Sara.

Nat Rev Genet; 19(6): 357-370, 2018 06.

Artículo en Inglés | MEDLINE | ID: mdl-29626206

3.

Corrigendum: High-throughput discovery of novel developmental phenotypes.

Dickinson, Mary E; Flenniken, Ann M; Ji, Xiao; Teboul, Lydia; Wong, Michael D; White, Jacqueline K; Meehan, Terrence F; Weninger, Wolfgang J; Westerberg, Henrik; Adissu, Hibret; Baker, Candice N; Bower, Lynette; Brown, James M; Caddle, L Brianna; Chiani, Francesco; Clary, Dave; Cleak, James; Daly, Mark J; Denegre, James M; Doe, Brendan; Dolan, Mary E; Edie Helmut Fuchs, Sarah M; Gailus-Durner, Valerie; Galli, Antonella; Gambadoro, Alessia; Gallegos, Juan; Guo, Shiying; Horner, Neil R; Hsu, Chih-Wei; Johnson, Sara J; Kalaga, Sowmya; Keith, Lance C; Lanoue, Louise; Lawson, Thomas N; Lek, Monkol; Mark, Manuel; Marschall, Susan; Mason, Jeremy; McElwee, Melissa L; Nutter, Susan Newbigging Lauryl M J; Peterson, Kevin A; Ramirez-Solis, Ramiro; Rowland, Douglas J; Ryder, Edward; Samocha, Kaitlin E; Seavitt, John R; Selloum, Mohammed; Szoke-Kovacs, Zsombor; Tamura, Masaru; Trainor, Amanda G.

Nature; 551(7680): 398, 2017 11 16.

Artículo en Inglés | MEDLINE | ID: mdl-29144450

4.

Mouse mutant phenotyping at scale reveals novel genes controlling bone mineral density.

Swan, Anna L; Schütt, Christine; Rozman, Jan; Del Mar Muñiz Moreno, Maria; Brandmaier, Stefan; Simon, Michelle; Leuchtenberger, Stefanie; Griffiths, Mark; Brommage, Robert; Keskivali-Bond, Piia; Grallert, Harald; Werner, Thomas; Teperino, Raffaele; Becker, Lore; Miller, Gregor; Moshiri, Ala; Seavitt, John R; Cissell, Derek D; Meehan, Terrence F; Acar, Elif F; Lelliott, Christopher J; Flenniken, Ann M; Champy, Marie-France; Sorg, Tania; Ayadi, Abdel; Braun, Robert E; Cater, Heather; Dickinson, Mary E; Flicek, Paul; Gallegos, Juan; Ghirardello, Elena J; Heaney, Jason D; Jacquot, Sylvie; Lally, Connor; Logan, John G; Teboul, Lydia; Mason, Jeremy; Spielmann, Nadine; McKerlie, Colin; Murray, Stephen A; Nutter, Lauryl M J; Odfalk, Kristian F; Parkinson, Helen; Prochazka, Jan; Reynolds, Corey L; Selloum, Mohammed; Spoutil, Frantisek; Svenson, Karen L; Vales, Taylor S; Wells, Sara E.

PLoS Genet; 16(12): e1009190, 2020 12.

Artículo en Inglés | MEDLINE | ID: mdl-33370286

5.

High-throughput discovery of novel developmental phenotypes.

Dickinson, Mary E; Flenniken, Ann M; Ji, Xiao; Teboul, Lydia; Wong, Michael D; White, Jacqueline K; Meehan, Terrence F; Weninger, Wolfgang J; Westerberg, Henrik; Adissu, Hibret; Baker, Candice N; Bower, Lynette; Brown, James M; Caddle, L Brianna; Chiani, Francesco; Clary, Dave; Cleak, James; Daly, Mark J; Denegre, James M; Doe, Brendan; Dolan, Mary E; Edie, Sarah M; Fuchs, Helmut; Gailus-Durner, Valerie; Galli, Antonella; Gambadoro, Alessia; Gallegos, Juan; Guo, Shiying; Horner, Neil R; Hsu, Chih-Wei; Johnson, Sara J; Kalaga, Sowmya; Keith, Lance C; Lanoue, Louise; Lawson, Thomas N; Lek, Monkol; Mark, Manuel; Marschall, Susan; Mason, Jeremy; McElwee, Melissa L; Newbigging, Susan; Nutter, Lauryl M J; Peterson, Kevin A; Ramirez-Solis, Ramiro; Rowland, Douglas J; Ryder, Edward; Samocha, Kaitlin E; Seavitt, John R; Selloum, Mohammed; Szoke-Kovacs, Zsombor.

Nature; 537(7621): 508-514, 2016 09 22.

Artículo en Inglés | MEDLINE | ID: mdl-27626380

6.

PDX Finder: A portal for patient-derived tumor xenograft model discovery.

Conte, Nathalie; Mason, Jeremy C; Halmagyi, Csaba; Neuhauser, Steven; Mosaku, Abayomi; Yordanova, Galabina; Chatzipli, Aikaterini; Begley, Dale A; Krupke, Debra M; Parkinson, Helen; Meehan, Terrence F; Bult, Carol C.

Nucleic Acids Res; 47(D1): D1073-D1079, 2019 01 08.

Artículo en Inglés | MEDLINE | ID: mdl-30535239

7.

A promoter-level mammalian expression atlas.

Forrest, Alistair R R; Kawaji, Hideya; Rehli, Michael; Baillie, J Kenneth; de Hoon, Michiel J L; Haberle, Vanja; Lassmann, Timo; Kulakovskiy, Ivan V; Lizio, Marina; Itoh, Masayoshi; Andersson, Robin; Mungall, Christopher J; Meehan, Terrence F; Schmeier, Sebastian; Bertin, Nicolas; Jørgensen, Mette; Dimont, Emmanuel; Arner, Erik; Schmidl, Christian; Schaefer, Ulf; Medvedeva, Yulia A; Plessy, Charles; Vitezic, Morana; Severin, Jessica; Semple, Colin A; Ishizu, Yuri; Young, Robert S; Francescatto, Margherita; Alam, Intikhab; Albanese, Davide; Altschuler, Gabriel M; Arakawa, Takahiro; Archer, John A C; Arner, Peter; Babina, Magda; Rennie, Sarah; Balwierz, Piotr J; Beckhouse, Anthony G; Pradhan-Bhatt, Swati; Blake, Judith A; Blumenthal, Antje; Bodega, Beatrice; Bonetti, Alessandro; Briggs, James; Brombacher, Frank; Burroughs, A Maxwell; Califano, Andrea; Cannistraci, Carlo V; Carbajo, Daniel; Chen, Yun.

Nature; 507(7493): 462-70, 2014 Mar 27.

Artículo en Inglés | MEDLINE | ID: mdl-24670764

8.

An atlas of active enhancers across human cell types and tissues.

Andersson, Robin; Gebhard, Claudia; Miguel-Escalada, Irene; Hoof, Ilka; Bornholdt, Jette; Boyd, Mette; Chen, Yun; Zhao, Xiaobei; Schmidl, Christian; Suzuki, Takahiro; Ntini, Evgenia; Arner, Erik; Valen, Eivind; Li, Kang; Schwarzfischer, Lucia; Glatz, Dagmar; Raithel, Johanna; Lilje, Berit; Rapin, Nicolas; Bagger, Frederik Otzen; Jørgensen, Mette; Andersen, Peter Refsing; Bertin, Nicolas; Rackham, Owen; Burroughs, A Maxwell; Baillie, J Kenneth; Ishizu, Yuri; Shimizu, Yuri; Furuhata, Erina; Maeda, Shiori; Negishi, Yutaka; Mungall, Christopher J; Meehan, Terrence F; Lassmann, Timo; Itoh, Masayoshi; Kawaji, Hideya; Kondo, Naoto; Kawai, Jun; Lennartsson, Andreas; Daub, Carsten O; Heutink, Peter; Hume, David A; Jensen, Torben Heick; Suzuki, Harukazu; Hayashizaki, Yoshihide; Müller, Ferenc; Forrest, Alistair R R; Carninci, Piero; Rehli, Michael; Sandelin, Albin.

Nature; 507(7493): 455-461, 2014 Mar 27.

Artículo en Inglés | MEDLINE | ID: mdl-24670763

9.

The International Mouse Phenotyping Consortium (IMPC): a functional catalogue of the mammalian genome that informs conservation.

Muñoz-Fuentes, Violeta; Cacheiro, Pilar; Meehan, Terrence F; Aguilar-Pimentel, Juan Antonio; Brown, Steve D M; Flenniken, Ann M; Flicek, Paul; Galli, Antonella; Mashhadi, Hamed Haseli; Hrabe de Angelis, Martin; Kim, Jong Kyoung; Lloyd, K C Kent; McKerlie, Colin; Morgan, Hugh; Murray, Stephen A; Nutter, Lauryl M J; Reilly, Patrick T; Seavitt, John R; Seong, Je Kyung; Simon, Michelle; Wardle-Jones, Hannah; Mallon, Ann-Marie; Smedley, Damian; Parkinson, Helen E.

Conserv Genet; 19(4): 995-1005, 2018.

Artículo en Inglés | MEDLINE | ID: mdl-30100824

10.

Ten simple rules for annotating sequencing experiments.

Stevens, Irene; Mukarram, Abdul Kadir; Hörtenhuber, Matthias; Meehan, Terrence F; Rung, Johan; Daub, Carsten O.

PLoS Comput Biol; 16(10): e1008260, 2020 10.

Artículo en Inglés | MEDLINE | ID: mdl-33017400

11.

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.

Koscielny, Gautier; Yaikhom, Gagarine; Iyer, Vivek; Meehan, Terrence F; Morgan, Hugh; Atienza-Herrero, Julian; Blake, Andrew; Chen, Chao-Kung; Easty, Richard; Di Fenza, Armida; Fiegel, Tanja; Grifiths, Mark; Horne, Alan; Karp, Natasha A; Kurbatova, Natalja; Mason, Jeremy C; Matthews, Peter; Oakley, Darren J; Qazi, Asfand; Regnart, Jack; Retha, Ahmad; Santos, Luis A; Sneddon, Duncan J; Warren, Jonathan; Westerberg, Henrik; Wilson, Robert J; Melvin, David G; Smedley, Damian; Brown, Steve D M; Flicek, Paul; Skarnes, William C; Mallon, Ann-Marie; Parkinson, Helen.

Nucleic Acids Res; 42(Database issue): D802-9, 2014 Jan.

Artículo en Inglés | MEDLINE | ID: mdl-24194600

12.

A mouse informatics platform for phenotypic and translational discovery.

Ring, Natalie; Meehan, Terrence F; Blake, Andrew; Brown, James; Chen, Chao-Kung; Conte, Nathalie; Di Fenza, Armida; Fiegel, Tanja; Horner, Neil; Jacobsen, Julius O B; Karp, Natasha; Lawson, Thomas; Mason, Jeremy C; Matthews, Peter; Morgan, Hugh; Relac, Mike; Santos, Luis; Smedley, Damian; Sneddon, Duncan; Pengelly, Alice; Tudose, Ilinca; Warren, Jonathan W G; Westerberg, Henrik; Yaikhom, Gagarine; Parkinson, Helen; Mallon, Ann-Marie.

Mamm Genome; 26(9-10): 413-21, 2015 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-26314589

13.

Ontology based molecular signatures for immune cell types via gene expression analysis.

Meehan, Terrence F; Vasilevsky, Nicole A; Mungall, Christopher J; Dougall, David S; Haendel, Melissa A; Blake, Judith A; Diehl, Alexander D.

BMC Bioinformatics; 14: 263, 2013 Aug 30.

Artículo en Inglés | MEDLINE | ID: mdl-24004649

14.

Logical development of the cell ontology.

Meehan, Terrence F; Masci, Anna Maria; Abdulla, Amina; Cowell, Lindsay G; Blake, Judith A; Mungall, Christopher J; Diehl, Alexander D.

BMC Bioinformatics; 12: 6, 2011 Jan 05.

Artículo en Inglés | MEDLINE | ID: mdl-21208450

15.

Autism candidate genes via mouse phenomics.

Meehan, Terrence F; Carr, Christopher J; Jay, Jeremy J; Bult, Carol J; Chesler, Elissa J; Blake, Judith A.

J Biomed Inform; 44 Suppl 1: S5-S11, 2011 Dec.

Artículo en Inglés | MEDLINE | ID: mdl-21397722

16.

Hematopoietic cell types: prototype for a revised cell ontology.

Diehl, Alexander D; Augustine, Alison Deckhut; Blake, Judith A; Cowell, Lindsay G; Gold, Elizabeth S; Gondré-Lewis, Timothy A; Masci, Anna Maria; Meehan, Terrence F; Morel, Penelope A; Nijnik, Anastasia; Peters, Bjoern; Pulendran, Bali; Scheuermann, Richard H; Yao, Q Alison; Zand, Martin S; Mungall, Christopher J.

J Biomed Inform; 44(1): 75-9, 2011 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-20123131

17.

OpenStats: A robust and scalable software package for reproducible analysis of high-throughput phenotypic data.

Haselimashhadi, Hamed; Mason, Jeremy C; Mallon, Ann-Marie; Smedley, Damian; Meehan, Terrence F; Parkinson, Helen.

PLoS One; 15(12): e0242933, 2020.

Artículo en Inglés | MEDLINE | ID: mdl-33378393

18.

Human and mouse essentiality screens as a resource for disease gene discovery.

Cacheiro, Pilar; Muñoz-Fuentes, Violeta; Murray, Stephen A; Dickinson, Mary E; Bucan, Maja; Nutter, Lauryl M J; Peterson, Kevin A; Haselimashhadi, Hamed; Flenniken, Ann M; Morgan, Hugh; Westerberg, Henrik; Konopka, Tomasz; Hsu, Chih-Wei; Christiansen, Audrey; Lanza, Denise G; Beaudet, Arthur L; Heaney, Jason D; Fuchs, Helmut; Gailus-Durner, Valerie; Sorg, Tania; Prochazka, Jan; Novosadova, Vendula; Lelliott, Christopher J; Wardle-Jones, Hannah; Wells, Sara; Teboul, Lydia; Cater, Heather; Stewart, Michelle; Hough, Tertius; Wurst, Wolfgang; Sedlacek, Radislav; Adams, David J; Seavitt, John R; Tocchini-Valentini, Glauco; Mammano, Fabio; Braun, Robert E; McKerlie, Colin; Herault, Yann; de Angelis, Martin Hrabe; Mallon, Ann-Marie; Lloyd, K C Kent; Brown, Steve D M; Parkinson, Helen; Meehan, Terrence F; Smedley, Damian.

Nat Commun; 11(1): 655, 2020 01 31.

Artículo en Inglés | MEDLINE | ID: mdl-32005800

19.

Epithelial and mucosal gamma delta T cells.

Komori, H Kiyomi; Meehan, Terrence F; Havran, Wendy L.

Curr Opin Immunol; 18(5): 534-8, 2006 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-16837181

20.

Know Thy PDX Model.

Meehan, Terrence F.

Cancer Res; 79(17): 4324-4325, 2019 09 01.

Artículo en Inglés | MEDLINE | ID: mdl-31481418

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