Assessment of turkey vehicle container microclimate on transit during summer season conditions.

This study evaluated the formed microclimate commercial truck transport practices effects on the turkeys' welfare by measuring Dead on Arrival (DOA) index and pale, soft, and exudative (PSE-like) meat occurrence. The experimental design was entirely randomized in a 6 × 2 factorial arrangements (two truck container compartments × six water shower groups) with birds positioned at superior front (SF), inferior front (IF), superior middle (SM), inferior middle (IM), superior rear (SR), and inferior rear (IR) and two bath treatments: with water shower (WiS) and without water shower (WoS) with eight replications for each treatment. The animals were transported for 95 min' journey from the farm to the slaughterhouse under hot-humidity conditions. The results shown herein indicated the formation of a thermal core at the inferior middle and rear truck container regions, because the heat produced by the birds and the influence of developed microclimate consisting of temperature, relative humidity, and air ventilation. The IM and IR container compartments under the WoS treatment presented the highest (P < 0.01) numbers of PSE-like meat incidence and DOA index values compared with those located at the front under WiS treatment as the consequence of the altered to birds unbearable conditions within the container microclimate in transit. The formed microclimate during the commercial transport practices under hot-humidity conditions affected the bird's welfare consequently turkey meat qualities.

Transcriptional profiling reveals the expression of novel genes in response to various stimuli in the human dermatophyte Trichophyton rubrum.

BACKGROUND: Cutaneous mycoses are common human infections among healthy and immunocompromised hosts, and the anthropophilic fungus Trichophyton rubrum is the most prevalent microorganism isolated from such clinical cases worldwide. The aim of this study was to determine the transcriptional profile of T. rubrum exposed to various stimuli in order to obtain insights into the responses of this pathogen to different environmental challenges. Therefore, we generated an expressed sequence tag (EST) collection by constructing one cDNA library and nine suppression subtractive hybridization libraries. RESULTS: The 1388 unigenes identified in this study were functionally classified based on the Munich Information Center for Protein Sequences (MIPS) categories. The identified proteins were involved in transcriptional regulation, cellular defense and stress, protein degradation, signaling, transport, and secretion, among other functions. Analysis of these unigenes revealed 575 T. rubrum sequences that had not been previously deposited in public databases. CONCLUSION: In this study, we identified novel T. rubrum genes that will be useful for ORF prediction in genome sequencing and facilitating functional genome analysis. Annotation of these expressed genes revealed metabolic adaptations of T. rubrum to carbon sources, ambient pH shifts, and various antifungal drugs used in medical practice. Furthermore, challenging T. rubrum with cytotoxic drugs and ambient pH shifts extended our understanding of the molecular events possibly involved in the infectious process and resistance to antifungal drugs.

Membrane transporter proteins are involved in Trichophyton rubrum pathogenesis.

Trichophyton rubrum is a dermatophyte responsible for the majority of human superficial mycoses. The functional expression of proteins important for the initial step and the maintenance of the infection process were identified previously in T. rubrum by subtraction suppression hybridization after growth in the presence of keratin. In this study, sequences similar to genes encoding the multidrug-resistance ATP-binding cassette (ABC) transporter, copper ATPase, the major facilitator superfamily and a permease were isolated, and used in Northern blots to monitor the expression of the genes, which were upregulated in the presence of keratin. A sequence identical to the TruMDR2 gene, encoding an ABC transporter in T. rubrum, was isolated in these experiments, and examination of a T. rubrum DeltaTruMDR2 mutant showed a reduction in infecting activity, characterized by low growth on human nails compared with the wild-type strain. The high expression levels of transporter genes by T. rubrum in mimetic infection and the reduction in virulence of the DeltaTruMDR2 mutant in a disease model in vitro suggest that transporters are involved in T. rubrum pathogenicity.

Correction to: in-transit development of color abnormalities in turkey breast meat during winter season.

[This corrects the article DOI: 10.1186/s40781-017-0157-1.].

Analysis of Trichophyton rubrum gene expression in response to cytotoxic drugs.

Suppressive subtractive hybridization was used to isolate transcripts specifically upregulated during Trichophyton rubrum exposure to acriflavin, fluconazole, griseofulvin, terbinafine or undecanoic acid. Macro-array dot-blot and sequencing of 132 clones, which correspond to genes differentially expressed after exposition of T. rubrum to at least one of these cytotoxic drugs, revealed 39 unique genes. Of these, 32 have not been previously described in T. rubrum, representing an increase in the number of T. rubrum genes that have been identified. The upregulation of the novel genes encoding a retrotransposon element, a carboxylic ester hydrolase, a copper resistance-associated P-type ATPase, a DNA mismatch repair protein and a NIMA (never in mitosis A) interactive protein was confirmed by Northern blot.

In-transit development of color abnormalities in turkey breast meat during winter season.

BACKGROUND: The poultry industry suffers losses from problems as pale, soft and exudative (PSE), and dark, firm and dry (DFD) meat can develop in meat as a result of short- and long-term stress, respectively. These abnormalities are impacted by pre-slaughter animal welfare. METHODS: This work evaluated the effects of open vehicle container microclimate, throughout the 38 ± 10 km journey from the farm to the slaughterhouse, on commercially turkey transported during the Brazilian winter season. The journey was initiated immediately after water bath in truck fitted with portable Kestrel anemometers to measure air ventilation, relative humidity, temperature and ventilation. RESULTS: The inferior compartments of the middle and rear truck regions showed highest temperature and relative humidity, and lower air ventilation. In addition, the superior compartments of the front truck regions presented lower temperature and wind chill, and highest air ventilation. The breast meat samples from animals located at the inferior compartments of the middle and rear truck regions and subjected to with water bath (WiB) treatment presented highest DFD-like and had lowest PSE-like meat incidence than those from animals located at other compartments within the container. Lower incidence of PSE-like meat was observed in birds without water bath (WoB). CONCLUSIONS: Assessment on turkeys transported under Brazilian southern winter conditions revealed that breast meat quality can be affected by relative humidity, air ventilation, temperature, and transport under subtropical conditions promoting color abnormalities and the formation of simultaneously PSE-like and DFD-like meat.

Isolation of transcripts over-expressed in human pathogen Trichophyton rubrum during growth in keratin.

Trichophyton rubrum is a cosmopolitan and anthropophilic fungus able to invade keratinized tissue, causing infection in human skin and nails. This work evaluated the changes in the extracellular pH during its growth in keratin (after 6, 12, 24, 48, 72h and 7 days) at initial pH 5.0. We observed a gradual increase of basal pH under keratin exposure when compared to glucose condition. Also, we identified 576T. rubrum transcripts differentially expressed by subtractive suppression hybridization (SSH) using conidia cultivated for 72h in keratin as tester, and cultivated in glucose as driver. The over-expression of 238 transcripts obtained under keratin condition was confirmed by macro-array dot-blot, revealing 28 unigenes. Putative proteins encoded by these genes showed similarity to fungi proteins involved in basic metabolism, growth and virulence, i.e., transporters ABC-MDR, MFS and ATPase of copper, NIMA interactive protein, Gag-Pol polyprotein, virulence factors serine-protease subtilisin and metalloprotease, cytochrome P450, GlcN-6-phosphate deaminase and Hsp30. The upregulation of T. rubrum genes encoding subtilisin, metalloprotease and Gag-Pol polyprotein was also validated by northern blot. The results of this study provide the first insight into genes differentially expressed during T. rubrum grown in keratin that may be involved in fungal pathogenesis.

[Natural infectivity of Xylella fastidiosa Wells et al. in sharpshooters (Hemiptera: Cicadellidae) from coffee plantations of Parana, Brazil]. / Infectividade natural por Xylella fastidiosa Wells et al. de cicadelíneos (Hemiptera: Cicadellidae) de lavouras cafeeiras do Paraná

Xylella fastidiosa Wells et al., a gram-negative and xylem limited bacterium, causes significative economic on several crops, such as the leaf scorch in coffee. It is transmitted by xylem feeding insects and four sharpshooters species have been reported as vectors of X. fastidiosa in coffee. The objective of this study was to determine the natural infectivity of X. fastidiosa in five species of sharpshooters from coffee trees: Acrogonia citrina Marucci & Cavichioli, Bucephalogonia xanthophis (Berg), Dilobopterus costalimai Young, Oncometopia facialis (Signoret) and Sonesimia grossa (Signoret). Samples were collected from coffee plantations in five counties of the North and Northwest regions of the State of Parana, Brazil, from October 1998 through November 2001. A total of 806 samples containing three to five insects were examined for the presence of X. fastidiosa by using PCR and nested PCR tests. X. fastidiosa was present in samples of all five species of sharpshooters collected in the two coffee regions. The average level of natural infectivity potential was 30.4%. However, this natural infectivity ranged from 2.2% for O. facialis to 68.8% for A. citrina. Sharpshooters collected in the spring tended to have lower natural infectivity of X. fastidiosa as compared to those collected in other seasons. The results obtained showed the high potential of dissemination of X. fastidiosa by different insect vectors in coffee trees in Parana.

Infectividade natural por Xylella fastidiosa Wells et al. de cicadelíneos (Hemiptera: Cicadellidae) de lavouras cafeeiras do Paraná / Natural infectivity of Xylella fastidiosa Wells et al. in sharpshooters (Hemiptera: Cicadellidae) from coffee plantations of Parana, Brazil

Xylella fastidiosa Wells et al. é uma bactéria gram-negativa, limitada ao xilema de plantas e responsável por doenças de importância econômica em diversas culturas, como a requeima-da-folha ou atrofia-dos-ramos em cafeeiro. É transmitida por insetos sugadores de xilema e quatro espécies de cigarrinhas já foram descritas como transmissoras do patógeno para cafeeiro. O objetivo deste trabalho foi determinar o grau de infectividade natural por X. fastidiosa em cinco espécies de cigarrinhas Cicadellidae potencialmente transmissoras da bactéria para cafeeiro: Acrogonia citrina Marucci & Cavichioli, Bucephalogonia xanthophis (Berg), Dilobopterus costalimai Young, Oncometopia facialis (Signoret) e Sonesimia grossa (Signoret). As coletas foram realizadas em lavouras cafeeiras de cinco municípios das regiões Norte e Noroeste do Paraná, de outubro de 1998 a novembro de 2001. O total de 806 amostras contendo de três a cinco insetos foi examinado para presença de X. fastidiosa utilizando os testes de PCR e nested PCR. Os resultados obtidos revelaram a presença de X. fastidiosa em amostras de todas as cinco espécies de cigarrinhas nas duas regiões cafeeiras. O potencial infectivo natural das amostras foi de 30,4 por cento e variou de 2,2 por cento para O. facialis a 68,8 por cento para A. citrina. As cigarrinhas coletadas na primavera apresentaram tendência para menor infectividade natural de X. fastidiosa quando comparadas com as amostras coletadas nas outras três estações do ano. Os resultados obtidos revelaram o grande potencial de disseminação de X. fastidiosa por insetos vetores em cafeeiros no Paraná.

Xylella fastidiosa Wells et al., a gram-negative and xylem limited bacterium, causes significative economic on several crops, such as the leaf scorch in coffee. It is transmitted by xylem feeding insects and four sharpshooters species have been reported as vectors of X. fastidiosa in coffee. The objective of this study was to determine the natural infectivity of X. fastidiosa in five species of sharpshooters from coffee trees: Acrogonia citrina Marucci & Cavichioli, Bucephalogonia xanthophis (Berg), Dilobopterus costalimai Young, Oncometopia facialis (Signoret) and Sonesimia grossa (Signoret). Samples were collected from coffee plantations in five counties of the North and Northwest regions of the State of Parana, Brazil, from October 1998 through November 2001. A total of 806 samples containing three to five insects were examined for the presence of X. fastidiosa by using PCR and nested PCR tests. X. fastidiosa was present in samples of all five species of sharpshooters collected in the two coffee regions. The average level of natural infectivity potential was 30.4 percent. However, this natural infectivity ranged from 2.2 percent for O. facialis to 68.8 percent for A. citrina. Sharpshooters collected in the spring tended to have lower natural infectivity of X. fastidiosa as compared to those collected in other seasons. The results obtained showed the high potential of dissemination of X. fastidiosa by different insect vectors in coffee trees in Parana.