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1.
Mol Phylogenet Evol ; 177: 107596, 2022 12.
Artículo en Inglés | MEDLINE | ID: mdl-35914646

RESUMEN

The Thoracotremata is a large and successful group of "true" crabs (Decapoda, Brachyura, Eubrachyura) with a great diversity of lifestyles and well-known intertidal representatives. The group represents the largest brachyuran radiation into terrestrial and semi-terrestrial environments and comprises multiple lineages of obligate symbiotic species. In consequence, they exhibit very diverse physiological and morphological adaptations. Our understanding of their evolution is, however, largely obscured by their confused classification. Here, we resolve interfamilial relationships of Thoracotremata, using 10 molecular markers and exemplars from all nominal families in order to reconstruct the pathways of lifestyle transition and to prepare a new taxonomy corresponding to phylogenetic relationships. The results confirm the polyphyly of three superfamilies as currently defined (Grapsoidea, Ocypodoidea and Pinnotheroidea). At the family level, Dotillidae, Macrophthalmidae, and Varunidae are not monophyletic. Ancestral state reconstruction analyses and divergent time estimations indicate that the common ancestor of thoracotremes already thrived in intertidal environments in the Late Cretaceous and terrestrialization became a major driver of thoracotreme diversification. Multiple semi-terrestrial and terrestrial lineages originated and radiated in the Early Eocene, coinciding with the global warming event at the Paleocene-Eocene Thermal Maximum (PETM). Secondary invasions into subtidal regions and colonizations of freshwater habitats occurred independently through multiple semi-terrestrial and terrestrial lineages. Obligate symbiosis between thoracotremes and other marine macro-invertebrates evolved at least twice. On the basis of the current molecular phylogenetic hypothesis, it will be necessary in the future to revise and recognize seven monophyletic superfamilies and revisit the morphological character states which define them.


Asunto(s)
Braquiuros , Animales , Braquiuros/genética , Ecosistema , Agua Dulce , Humanos , Filogenia , Simbiosis/genética
2.
BMC Evol Biol ; 19(1): 105, 2019 05 17.
Artículo en Inglés | MEDLINE | ID: mdl-31101005

RESUMEN

BACKGROUND: The Pleistocene cyclic sea-level fluctuations are thought to have markedly affected the distribution and genetic architecture of Atlanto-Mediterranean biota. Despite the acknowledged key role played by these historical events in shaping population genetic structure of marine species, little is still known about the processes involved in shaping the spatial distribution of genetic variation within intertidal species. We intended in this study to reconstruct the phylogeography of a common and widely distributed coastal species across the East Atlantic and Mediterranean Sea (the warty crab Eriphia verrucosa), aiming to unravel potential microevolutionary processes likely involved in shaping its genetic polymorphism. For this purpose, a total of 155 specimens of E. verrucosa from 35 locations across the entire distribution range were analyzed by comparing a 453 basepairs region of the mitochondrial gene cytochrome oxidase subunit 1 (Cox1). RESULTS: Our results unveiled the prevalence of high genetic connectivity among East Atlantic and Mediterranean populations, with noticeable genetic distinctiveness of the peripheral population from the Azores. Spatio-temporal patterns of genetic diversification and demographic history allowed retrieving genetic imprints of late Pleistocene vicariant event across the Gibraltar Strait followed by subsequent postglacial expansion events for both the East Atlantic and Mediterranean regions. Integrative evidences from the outcomes of comparison of regional genetic diversification, as well as evolutionary and biogeographic histories reconstructions, support the existence of potential glacial refugia for E. verrucosa in the East Atlantic and western Mediterranean. Our results also revealed low levels of genetic variability along with recent demographic and spatial expansion events for eastern Mediterranean warty crabs, suggesting that the eastern areas within the distribution range of the species might have been recently colonized from putative glacial refugia. CONCLUSIONS: These findings provide new insights into the phylogeography and evolutionary history of a common but poorly studied Atlanto-Mediterranean decapod species. Specifically, they contribute to the understanding of the impact of historical processes on shaping contemporary population genetic structure and diversity in intertidal marine species.


Asunto(s)
Braquiuros/genética , Cubierta de Hielo , Filogenia , Filogeografía , Refugio de Fauna , Animales , Secuencia de Bases , Teorema de Bayes , Complejo IV de Transporte de Electrones/genética , Variación Genética , Gibraltar , Haplotipos/genética , Mar Mediterráneo , Factores de Tiempo
3.
BMC Evol Biol ; 18(1): 53, 2018 04 11.
Artículo en Inglés | MEDLINE | ID: mdl-29642852

RESUMEN

BACKGROUND: Recently, population genetic studies of Mediterranean marine species highlighted patterns of genetic divergence and phylogeographic breaks, due to the interplay between impacts of Pleistocene climate shifts and contemporary hydrographical barriers. These factors markedly shaped the distribution of marine organisms and their genetic makeup. The present study is part of an ongoing effort to understand the phylogeography and evolutionary history of the highly dispersive Mediterranean green crab, Carcinus aestuarii (Nardo, 1847), across the Mediterranean Sea. Recently, marked divergence between two highly separated haplogroups (genetic types I and II) of C. aestuarii was discerned across the Siculo-Tunisian Strait, suggesting an Early Pleistocene vicariant event. In order to better identify phylogeographic patterns in this species, a total of 263 individuals from 22 Mediterranean locations were analysed by comparing a 587 basepair region of the mitochondrial gene Cox1 (cytochrome oxidase subunit 1). The examined dataset is composed of both newly generated sequences (76) and previously investigated ones (187). RESULTS: Our results unveiled the occurrence of a highly divergent haplogroup (genetic type III) in the most north-eastern part of the Mediterranean Sea. Divergence between the most distinct type III and the common ancestor of both types I and II corresponds to the Early Pleistocene and coincides with the historical episode of separation between types I and II. Our results also revealed strong genetic divergence among adjacent regions (separating the Aegean and Marmara seas from the remaining distribution zone) and confirmed a sharp phylogeographic break across the Eastern Mediterranean. The recorded parapatric genetic divergence, with the potential existence of a contact zone between both groups in the Ionian Sea and notable differences in the demographic history, suggest the likely impact of paleoclimatic events, as well as past and contemporary oceanographic processes, in shaping genetic variability of this species. CONCLUSIONS: Our findings not only provide further evidence for the complex evolutionary history of the green crab in the Mediterranean Sea, but also stress the importance of investigating peripheral areas in the species' distribution zone in order to fully understand the distribution of genetic diversity and unravel hidden genetic units and local patterns of endemism.


Asunto(s)
Braquiuros/clasificación , Braquiuros/genética , Animales , Evolución Biológica , Ciclooxigenasa 1/genética , ADN Mitocondrial/genética , Flujo Genético , Variación Genética , Mar Mediterráneo , Filogenia , Filogeografía , Análisis de Secuencia de ADN
4.
BMC Evol Biol ; 16: 150, 2016 07 26.
Artículo en Inglés | MEDLINE | ID: mdl-27455997

RESUMEN

BACKGROUND: The extent of genetic structure of a species is determined by the amount of current gene flow and the impact of historical and demographic factors. Most marine invertebrates have planktonic larvae and consequently wide potential dispersal, so that genetic uniformity should be common. However, phylogeographic investigations reveal that panmixia is rare in the marine realm. Phylogeographic patterns commonly coincide with geographic transitions acting as barriers to gene flow. In the Mediterranean Sea and adjoining areas, the best known barriers are the Atlantic-Mediterranean transition, the Siculo-Tunisian Strait and the boundary between Aegean and Black seas. Here, we perform the so far broadest phylogeographic analysis of the crab Pachygrapsus marmoratus, common across the north-eastern Atlantic Ocean, Mediterranean and Black seas. Previous studies revealed no or weak genetic structuring at meso-geographic scale based on mtDNA, while genetic heterogeneity at local scale was recorded with microsatellites, even if without clear geographic patterns. Continuing the search for phylogeographic signal, we here enlarge the mtDNA dataset including 51 populations and covering most of the species' distribution range. RESULTS: This enlarged dataset provides new evidence of three genetically separable groups, corresponding to the Portuguese Atlantic Ocean, Mediterranean Sea plus Canary Islands, and Black Sea. Surprisingly, hierarchical AMOVA and Principal Coordinates Analysis agree that our Canary Islands population is closer to western Mediterranean populations than to mainland Portugal and Azores populations. Within the Mediterranean Sea, we record genetic homogeneity, suggesting that population connectivity is unaffected by the transition between the western and eastern Mediterranean. The Mediterranean metapopulation seems to have experienced a relatively recent expansion around 100,000 years ago. CONCLUSIONS: Our results suggest that the phylogeographic pattern of P. marmoratus is shaped by the geological history of Mediterranean and adjacent seas, restricted current gene flow among different marginal seas, and incomplete lineage sorting. However, they also caution from exclusively testing well-known biogeographic barriers, thereby neglecting other possible phylogeographic patterns. Mostly, this study provides evidence that a geographically exhaustive dataset is necessary to detect shallow phylogeographic structure within widespread marine species with larval dispersal, questioning all studies where species have been categorized as panmictic based on numerically and geographically limited datasets.


Asunto(s)
Braquiuros/genética , ADN Mitocondrial , Animales , Océano Atlántico , Azores , ADN Mitocondrial/genética , Flujo Génico , Variación Genética , Genética de Población , Mar Mediterráneo , Repeticiones de Microsatélite , Filogeografía , Portugal , Tamaño de la Muestra , Análisis de Secuencia de ADN , España
5.
BMC Evol Biol ; 15: 142, 2015 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-26187050

RESUMEN

BACKGROUND: The White Spot Syndrome Virus (WSSV) is an important pathogen that infects a variety of decapod species and causes a highly contagious disease in penaeid shrimps. Mass mortalities caused by WSSV have pronounced commercial impact on shrimp aquaculture. Until now WSSV is the only known member of the virus family Nimaviridae, a group with obscure phylogenetic affinities. Its isolated position makes WSSV studies challenging due to large number of genes without homology in other viruses or cellular organisms. RESULTS: Here we report the discovery of an unusually large amount of sequences with high similarity to WSSV in a genomic library from the Jamaican bromeliad crab Metopaulias depressus. De novo assembly of these sequences allowed for the partial reconstruction of the genome of this endogenized virus with total length of 200 kbp encompassed in three scaffolds. The genome includes at least 68 putative open reading frames with homology in WSSV, most of which are intact. Among these, twelve orthologs of WSSV genes coding for non-structural proteins and nine genes known to code for the major components of the WSSV virion were discovered. Together with reanalysis of two similar cases of WSSV-like sequences in penaeid shrimp genomic libraries, our data allowed comparison of gene composition and gene order between different lineages related to WSSV. Furthermore, screening of published sequence databases revealed sequences with highest similarity to WSSV and the newly described virus in genomic libraries of at least three further decapod species. Analysis of the viral sequences detected in decapods suggests that they are less a result of contemporary WSSV infection, but rather originate from ancestral infection events. Phylogenetic analyses suggest that genes were acquired repeatedly by divergent viruses or viral strains of the Nimaviridae. CONCLUSIONS: Our results shed new light on the evolution of the Nimaviridae and point to a long association of this viral group with decapod crustaceans.


Asunto(s)
Decápodos/virología , Fósiles , Nimaviridae/genética , Nimaviridae/aislamiento & purificación , Virus del Síndrome de la Mancha Blanca 1/genética , Animales , Genoma Viral , Sistemas de Lectura Abierta , Penaeidae/virología , Filogenia
6.
BMC Evol Biol ; 15: 106, 2015 Jun 10.
Artículo en Inglés | MEDLINE | ID: mdl-26058480

RESUMEN

BACKGROUND: During past glacial periods, many species of forest-dwelling animals experienced range contractions. In contrast, species living outside such moist habitats appear to have reacted to Quaternary changes in different ways. The Atlantic Forest represents an excellent opportunity to test phylogeographic hypotheses, because it has a wide range of vegetation types, including unforested habitats covered predominantly by herbaceous and shrubby plants, which are strongly influenced by the harsh environment with strong wind and high insolation. Here, we investigated the distribution of genetic diversity in the endemic sand dune ant Mycetophylax simplex across its known range along the Brazilian coast, with the aim of contributing to the understanding of alternative phylogeographic patterns. We used partial sequences of the mitochondrial gene cytochrome oxidase I and nuclear gene wingless from 108 specimens and 51 specimens, respectively, to assess the phylogeography and demographic history of this species. To achieve this we performed different methods of phylogenetic and standard population genetic analyses. RESULTS: The observed genetic diversity distribution and historical demographic profile suggests that the history of M. simplex does not match the scenario suggested for other Atlantic Forest species. Instead, it underwent demographic changes and range expansions during glacial periods. Our results show that M. simplex presents a shallow phylogeographic structure with isolation by distance among the studied populations, living in an almost panmictic population. Our coalescence approach indicates that the species maintained a stable population size until roughly 75,000 years ago, when it underwent a gradual demographic expansion that were coincident with the low sea-level during the Quaternary. Such demographic events were likely triggered by the expansion of the shorelines during the lowering of the sea level. CONCLUSIONS: Our data suggest that over evolutionary time M. simplex did not undergo dramatic range fragmentation, but rather it likely persisted in largely interconnected populations. Furthermore, we add an important framework about how both glacial and interglacial events could positively affect the distribution and diversification of species. The growing number of contrasting phylogeographic patterns within and among species and regions have shown that Quaternary events influenced the distribution of species in more ways than first supposed.


Asunto(s)
Hormigas/genética , Filogeografía , Animales , Hormigas/clasificación , Hormigas/enzimología , Evolución Biológica , Brasil , Clima , ADN Mitocondrial/genética , Ecosistema , Complejo IV de Transporte de Electrones/genética , Variación Genética , Proteínas de Insectos/genética , Datos de Secuencia Molecular , Filogenia , Densidad de Población , Dinámica Poblacional , Proteína Wnt1/genética
7.
Mol Biol Evol ; 31(5): 1173-87, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24520090

RESUMEN

Crabs of the infra-order Brachyura are one of the most diverse groups of crustaceans with approximately 7,000 described species in 98 families, occurring in marine, freshwater, and terrestrial habitats. The relationships among the brachyuran families are poorly understood due to the high morphological complexity of the group. Here, we reconstruct the most comprehensive phylogeny of Brachyura to date using sequence data of six nuclear protein-coding genes and two mitochondrial rRNA genes from more than 140 species belonging to 58 families. The gene tree confirms that the "Podotremata," are paraphyletic. Within the monophyletic Eubrachyura, the reciprocal monophyly of the two subsections, Heterotremata and Thoracotremata, is supported. Monophyly of many superfamilies, however, is not recovered, indicating the prevalence of morphological convergence and the need for further taxonomic studies. Freshwater crabs were derived early in the evolution of Eubrachyura and are shown to have at least two independent origins. Bayesian relaxed molecular methods estimate that freshwater crabs separated from their closest marine sister taxa ~135 Ma, that is, after the break up of Pangaea (∼200 Ma) and that a Gondwanan origin of these freshwater representatives is untenable. Most extant families and superfamilies arose during the late Cretaceous and early Tertiary.


Asunto(s)
Braquiuros/clasificación , Braquiuros/genética , Evolución Molecular , Animales , Secuencia de Bases , ADN Ribosómico/genética , Fósiles , Agua Dulce , Genes Mitocondriales , Especiación Genética , Modelos Genéticos , Filogenia , Factores de Tiempo
8.
Sci Rep ; 14(1): 6677, 2024 03 20.
Artículo en Inglés | MEDLINE | ID: mdl-38509217

RESUMEN

The hyperarid mangrove in the Middle East is characterised by the absence of rivers or freshwater inputs and is one of the most extreme settings of this ecosystem on Earth. Endemic to Qatar's hyperarid mangroves, a Palaemon shrimp is uniquely confined to a sole mangrove site in the Arabian Gulf. Within these mangrove channels, we unveiled brine groundwater sources exceeding 70 ppt salinity, contrasting the local marine standard of 42 ppt. Concurrently, a mysid species typically linked to salt pans and groundwater coexists. Stable isotopic analysis implied the existence of a predator-prey dynamic between this mysid species and the studied shrimp. Then, investigating the endemic shrimp's adaptation to extreme salinity, we conducted osmolarity experiments and phylogenetic studies. Our findings demonstrate that this shrimp transitions from hypo- to hyper-osmoregulation, tolerating salinities from 18 to 68 ppt-an unprecedented osmoregulatory capacity among caridean shrimps. This speciation pattern likely arises from the species osmolarity adaptation, as suggested for other Palaemon congeners. Phylogenetic analysis of the studied Palaemon, along with the mangrove's geological history, suggests a profound evolutionary interplay between the ecosystem and the shrimp since the Eocene. This study proposes the hyperarid mangrove enclave as an Athalassic mangrove oasis-a distinctive, isolated ecosystem within the desert landscape.


Asunto(s)
Osmorregulación , Palaemonidae , Animales , Ecosistema , Filogenia , Equilibrio Hidroelectrolítico , Concentración Osmolar , Palaemonidae/fisiología
9.
Zookeys ; 1179: 169-196, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37731535

RESUMEN

A new freshwater crab of the potamid genus Candidiopotamon Bott, 1967, is described from eastern Taiwan. Candidiopotamonpenglai sp. nov. is morphologically similar to C.rathbuni (De Man, 1914) from western Taiwan, but can be distinguished by the morphology of the male first gonopod (G1), as well as by their mitochondrial DNA (16S rRNA and COI genes). In the G1 of C.rathbuni, the subterminal segment shows a cline from robust in northern populations to slender in southern populations. In the G1 of C.penglaisp. nov., a distinctly larger and more distally directed keel-like projection is found on the distal inner edge of the terminal segment, with northern populations having an inward-curving subterminal segment and southern populations a straight subterminal segment. The genetic differentiation of the two species of Candidiopotamon within Taiwan is discussed, and morphological differences are compared. A key to the species of Candidiopotamon is also provided.

10.
Zootaxa ; 5336(4): 567-576, 2023 Aug 24.
Artículo en Inglés | MEDLINE | ID: mdl-38221075

RESUMEN

A new species of Parasesarma, P. rahayuae n. sp., is described from Sulawesi, Indonesia. Genetically, the new species is distinct from all other known species of Parasesarma and has a close phylogenetic relationship with P. anambas Yeo, Rahayu & Ng, 2004 and P. gemmatum Li, Shih & Ng, 2019. Morphologically, the new species most closely resembles P. anambas and P. gemmatum, but can be distinguished from these two species by the shape of the dactylar tubercles of the male chela and of the male first gonopod. This is the fourth species of Parasesarma recorded from Sulawesi, and with its description, the number of species assigned to the genus Parasesarma is 58.


Asunto(s)
Braquiuros , Cipriniformes , Humanos , Masculino , Animales , Indonesia , Filogenia
11.
Genes (Basel) ; 13(2)2022 02 04.
Artículo en Inglés | MEDLINE | ID: mdl-35205344

RESUMEN

Metopaulias depressus is a non-marine crab endemic to Jamaica that dwells in rainforest bromeliads and exhibits elaborate active parental care behavior. Current genomic resources on M. depressus are rare, limiting the understanding of its adaptation to terrestrial life in species that evolved from marine ancestors. This study reports the complete mitochondrial genome of M. depressus assembled using Sanger sequencing. The AT-rich mitochondrial genome of M. depressus is 15,765 bp in length and comprises 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, and 22 transfer RNA genes. A single 691 bp-long intergenic space is assumed to be the control region (CR) or D-loop. A set of selective pressure analyses indicate that the entirety of the PCGs experience purifying selection. Cox1, cox2, nad5, cox3, and atp6 experience strong purifying selection, and atp8 experiences weak purifying selection compared to the rest of the PCGs. The secondary structures of most tRNA genes exhibit a standard 'cloverleaf' structure, with the exception of trnS1, which lacks the dihydroxyuridine (DHU) arm but not the loop, the trnH gene, which lacks the thymine pseudouracil cytosine (T) loop but not the arm, and trnM, which exhibits an overly developed T loop. A maximum likelihood phylogenetic analysis based on all PCGs indicated that M. depressus is more closely related to the genera Clistocoeloma, Nanosesarma, and Parasesarma than to Chiromantes, Geosesarma, and Orisarma. This study contributes to deciphering the phylogenetic relationships within the family Sesarmidae and represents a new genomic resource for this iconic crab species.


Asunto(s)
Braquiuros , Genoma Mitocondrial , Animales , Braquiuros/genética , Genoma Mitocondrial/genética , Genómica , Filogenia , ARN de Transferencia/genética
12.
PLoS One ; 17(1): e0262122, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35025933

RESUMEN

Due to the lack of visible barriers to gene flow, it was a long-standing assumption that marine coastal species are widely distributed, until molecular studies revealed geographically structured intraspecific genetic differentiation in many taxa. Historical events of sea level changes during glacial periods are known to have triggered sequential disjunctions and genetic divergences among populations, especially of coastal organisms. The Parasesarma bidens species complex so far includes three named plus potentially cryptic species of estuarine brachyuran crabs, distributed along East to Southeast Asia. The aim of the present study is to address phylogeography and uncover real and hidden biological diversity within this complex, by revealing the underlying genetic structure of populations and species throughout their distribution ranges from Japan to West Papua, with a comparison of mitochondrial COX1 and 16S rRNA gene sequences. Our results reveal that the P. bidens species complex consists of at least five distinct clades, resulting from four main cladogenesis events during the mid to late Pleistocene. Among those clades, P. cricotum and P. sanguimanus are recovered as monophyletic taxa. Geographically restricted endemic clades are encountered in southeastern Indonesia, Japan and China respectively, whereas the Philippines and Taiwan share two clades. As individuals of the Japanese clade can also be found in Taiwan, we provide evidence of a third lineage and the occurrence of a potential cryptic species on this island. Ocean level retreats during Pleistocene ice ages and present oceanic currents appear to be the main triggers for the divergences of the five clades that are here addressed as the P. bidens complex. Secondary range expansions converted Taiwan into the point of maximal overlap, sharing populations with Japan and the Philippines, but not with mainland China.


Asunto(s)
Biodiversidad , Braquiuros/clasificación , Animales , Braquiuros/genética , China , Complejo IV de Transporte de Electrones/química , Complejo IV de Transporte de Electrones/genética , Fósiles/historia , Genética de Población , Historia Antigua , Indonesia , Japón , Filipinas , Filogenia , Filogeografía , ARN Ribosómico 16S/química , ARN Ribosómico 16S/genética , ARN Ribosómico 16S/metabolismo , Análisis de Secuencia de ADN , Taiwán
13.
Biology (Basel) ; 12(1)2022 Dec 24.
Artículo en Inglés | MEDLINE | ID: mdl-36671728

RESUMEN

The American blue crab Callinectes sapidus is a particularly successful invader in estuarine ecosystems worldwide. Despite increasing awareness of its potential harm, the invasion history and underlying genetic diversity of this species within the Mediterranean Sea remain unknown. This study constitutes the first large-scale approach to study phylogeographic patterns of C. sapidus in Europe, facilitated by the first comparison of all currently available COI sequence data. For this investigation, 71 individuals of C. sapidus were newly analyzed and the entire COI gene was sequenced and used for a comparative phylogeographic analyses. For the first time, two separately used adjacent regions of this gene were combined in a single dataset. This allowed emphasizing the prevalence of three geographically defined lineages within the native range: (1) eastern North America, including the Gulf of Mexico, (2) the Caribbean, and (3) Brazil. New data from the Mediterranean reveal that non-native populations of C. sapidus are characterized by a conspicuously low genetic diversity (except for Turkey, where stocking took place), and that there is surprisingly low connectivity among established populations. The occurrence of strong genetic bottlenecks suggests few founder individuals. This confirms that, even under a scenario of restricted large-scale gene flow, a very limited number of invasive individuals is sufficient for a massive impact.

14.
Zool Stud ; 61: e67, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36568815

RESUMEN

Most fiddler crabs have an extended planktonic larval phase, potentially maintaining gene flow among widely separated populations, in the absence of marine barriers. Such marine barriers could be long coastal stretches without suitable habitat, freshwater plumes caused by large river mouths, or strong currents. Typically, fiddler crabs inhabit mangrove habitats, and as mangroves tend to have a patchy distribution, it is important to gather information on the connectivity between neighboring mangroves and recognize local endemisms. To detect potential genetic differentiation among mangrove-dwelling populations of Leptuca thayeri and Uca maracoani along several thousand kilometers of a tropical coastline, mtDNA sequences of different populations from Brazil and two Caribbean islands were analyzed and compared. As shown in previous studies with fiddler crabs, Brazilian populations are genetically indiscernible, and our data suggest the absence of long-standing gene flow barriers in the two studied species along the Brazilian coast. This includes both sides of the postulated biogeographic barriers corresponding to the split of the Central South Equatorial Current and to the Amazon River freshwater plume. In contrast, conspecific individuals from the Greater Antilles carried different haplotypes, suggesting a biogeographical barrier between Brazil and the Caribbean, apparently having limited gene flow between both regions for extended time periods.

15.
BMC Evol Biol ; 10: 287, 2010 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-20849594

RESUMEN

BACKGROUND: The faunal and floral relationship of northward-drifting India with its neighboring continents is of general biogeographic interest as an important driver of regional biodiversity. However, direct biogeographic connectivity of India and Southeast Asia during the Cenozoic remains largely unexplored. We investigate timing, direction and mechanisms of faunal exchange between India and Southeast Asia, based on a molecular phylogeny, molecular clock-derived time estimates and biogeographic reconstructions of the Asian freshwater crab family Gecarcinucidae. RESULTS: Although the Gecarcinucidae are not an element of an ancient Gondwana fauna, their subfamily Gecarcinucinae, and probably also the Liotelphusinae, evolved on the Indian Subcontinent and subsequently dispersed to Southeast Asia. Estimated by a model testing approach, this dispersal event took place during the Middle Eocene, and thus before the final collision of India and the Tibet-part of Eurasia. CONCLUSIONS: We postulate that the India and Southeast Asia were close enough for exchange of freshwater organisms during the Middle Eocene, before the final Indian-Eurasian collision. Our data support geological models that assume the Indian plate having tracked along Southeast Asia during its move northwards.


Asunto(s)
Decápodos/clasificación , Decápodos/genética , Animales , Asia Sudoriental , Teorema de Bayes , Geografía , India , Filogenia
17.
Mol Phylogenet Evol ; 55(3): 765-75, 2010 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-20307676

RESUMEN

A phylogeographic analysis is carried out for the widely distributed European littoral prawn Palaemon elegans in order to test for potential genetic differentiation and geographic structure. Mitochondrial sequences were obtained from 283 specimens from the northeastern Atlantic, the Baltic, Mediterranean, Black and Caspian Seas. Our study revealed a surprisingly complex population structure. Three main haplogroups can be separated: one from the Atlantic (Type I) and two from the Mediterranean (Types II and III). While the Mediterranean types occur in sympatry, a clear phylogeographic break was observed along the Almería-Oran Front separating Type I and giving evidence for a genetic isolation of Atlantic and Mediterranean populations. Type III represents the most distinct haplogroup with high levels of nucleotide divergence, indicating the occurrence of a cryptic species with a Messinian origin. The colonization of the southeastern Baltic Sea is most likely due to human introduction.


Asunto(s)
Decápodos/genética , Genética de Población , Filogenia , Animales , Ciclooxigenasa 1/genética , ADN Mitocondrial/genética , Evolución Molecular , Geografía , Haplotipos , Modelos Genéticos , ARN Ribosómico 16S/genética , Alineación de Secuencia , Análisis de Secuencia de ADN
18.
Zootaxa ; 4816(4): zootaxa.4816.4.2, 2020 Jul 20.
Artículo en Inglés | MEDLINE | ID: mdl-33055683

RESUMEN

Two new species of Leptarma, L. dispersum n. sp. and L. reunionense n. sp. are described from Europa Island and Réunion Island, respectively. Genetically, based on the mitochondrial COX1 gene, both species are markedly divergent from other congeneric species. Phylogenetically, L. dispersum n. sp. shows close relationship with L. lenzii (De Man, 1895) while L. reunionense n. sp. clusters with L. aurifrons (Li, Ng Shih, 2019) and the species pair L. moluccense (De Man, 1892) and L. paucitorum (Rahayu Ng, 2009). Morphologically, the new species differ most significantly from congeners by the relative length of the ambulatory legs and the shapes of the first gonopods and carapace. After the description of these two new species, the number of species comprised in the genus Leptarma is raised to 20, four of them being distributed in and off East Africa.


Asunto(s)
Braquiuros , Animales , Océano Índico , Filogenia
19.
Zootaxa ; 4803(2): zootaxa.4803.2.12, 2020 Jun 26.
Artículo en Inglés | MEDLINE | ID: mdl-33056027

RESUMEN

The occurrence of Parasesarma cricotum (Rahayu Davie, 2002) in Palau and Sulawesi is reported after the examination of several male and female specimens collected from Sulawesi, Indonesia, and Palau. The present record from Palau, has extended the distribution of P. cricotum considerably further northeast of its natural distribution range.


Asunto(s)
Braquiuros , Animales , Femenino , Indonesia , Masculino , Palau
20.
Mol Phylogenet Evol ; 52(3): 825-34, 2009 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-19394431

RESUMEN

The presence of boundaries to dispersal has been recently documented for many Indo-West Pacific (IWP) species with planktonic propagules and a widespread distribution. We studied the phylogeography of the mangrove crab Neosarmatium meinerti (Brachyura: Sesarmidae) and the phylogenetic relationship to its presumed sister species N. fourmanoiri in the IWP in order to compare intraspecific with interspecific diversity. Portions of the mitochondrial genes 16S and CoxI were sequenced for 23 specimens of N. meinerti and 5 N. fourmanoiri, while a fragment of the 28S was obtained for a subset of specimens. Genetic data are supplemented by morphometric and based on 37 adult males of N. meinerti and 9 males of N. fourmanoiri. The conserved nuclear 28S reveals the existence of a genetic break between the Indian and Pacific oceans. Otherwise, mitochondrial genes as well as morphometry clearly support the presence of a species complex within N. meinerti composed by four well structured and geographically defined lineages: East African coast; western Indian Ocean islands; South East Asia; and Australia.


Asunto(s)
Braquiuros/genética , Evolución Molecular , Especiación Genética , Filogenia , Animales , Braquiuros/anatomía & histología , Braquiuros/clasificación , ADN Mitocondrial/genética , Océano Índico , Masculino , Modelos Genéticos , Océano Pacífico , ARN Ribosómico 28S/genética , Alineación de Secuencia , Análisis de Secuencia de ADN
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