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1.

NF-κB subunits direct kinetically distinct transcriptional cascades in antigen receptor-activated B cells.

Zhao, Mingming; Chauhan, Prashant; Sherman, Cheryl A; Singh, Amit; Kaileh, Mary; Mazan-Mamczarz, Krystyna; Ji, Hongkai; Joy, Jaimy; Nandi, Satabdi; De, Supriyo; Zhang, Yongqing; Fan, Jinshui; Becker, Kevin G; Loke, Png; Zhou, Weiqiang; Sen, Ranjan.

Nat Immunol; 24(9): 1552-1564, 2023 09.

Artículo en Inglés | MEDLINE | ID: mdl-37524800

2.

Phage display of environmental protein toxins and virulence factors reveals the prevalence, persistence, and genetics of antibody responses.

Angkeow, Julia W; Monaco, Daniel R; Chen, Athena; Venkataraman, Thiagarajan; Jayaraman, Sahana; Valencia, Cristian; Sie, Brandon M; Liechti, Thomas; Farhadi, Payam N; Funez-dePagnier, Gabriela; Sherman-Baust, Cheryl A; Wong, May Q; Ruczinski, Ingo; Caturegli, Patrizio; Sears, Cynthia L; Simner, Patricia J; Round, June L; Duggal, Priya; Laserson, Uri; Steiner, Theodore S; Sen, Ranjan; Lloyd, Thomas E; Roederer, Mario; Mammen, Andrew L; Longman, Randy S; Rider, Lisa G; Larman, H Benjamin.

Immunity; 55(6): 1051-1066.e4, 2022 06 14.

Artículo en Inglés | MEDLINE | ID: mdl-35649416

3.

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Roy, Roshni; Ramamoorthy, Senthilkumar; Shapiro, Benjamin D; Kaileh, Mary; Hernandez, Dena; Sarantopoulou, Dimitra; Arepalli, Sampath; Boller, Sören; Singh, Amit; Bektas, Arsun; Kim, Jaekwan; Moore, Ann Zenobia; Tanaka, Toshiko; McKelvey, Julia; Zukley, Linda; Nguyen, Cuong; Wallace, Tonya; Dunn, Christopher; Wersto, Robert; Wood, William; Piao, Yulan; Becker, Kevin G; Coletta, Christopher; De, Supriyo; Sen, Jyoti Misra; Battle, Alexis; Weng, Nan-Ping; Grosschedl, Rudolf; Ferrucci, Luigi; Sen, Ranjan.

Immunity; 54(11): 2465-2480.e5, 2021 11 09.

Artículo en Inglés | MEDLINE | ID: mdl-34706222

4.

Architectural protein subclasses shape 3D organization of genomes during lineage commitment.

Phillips-Cremins, Jennifer E; Sauria, Michael E G; Sanyal, Amartya; Gerasimova, Tatiana I; Lajoie, Bryan R; Bell, Joshua S K; Ong, Chin-Tong; Hookway, Tracy A; Guo, Changying; Sun, Yuhua; Bland, Michael J; Wagstaff, William; Dalton, Stephen; McDevitt, Todd C; Sen, Ranjan; Dekker, Job; Taylor, James; Corces, Victor G.

Cell; 153(6): 1281-95, 2013 Jun 06.

Artículo en Inglés | MEDLINE | ID: mdl-23706625

5.

The dynamic changes in cytokine responses in COVID-19: a snapshot of the current state of knowledge.

Buszko, Maja; Park, Jung-Hyun; Verthelyi, Daniela; Sen, Ranjan; Young, Howard A; Rosenberg, Amy S.

Nat Immunol; 21(10): 1146-1151, 2020 10.

Artículo en Inglés | MEDLINE | ID: mdl-32855555

6.

Transcription, splicing, and release: are we there yet?

Sen, Ranjan; Fugmann, Sebastian D.

Cell; 150(2): 241-3, 2012 Jul 20.

Artículo en Inglés | MEDLINE | ID: mdl-22817885

7.

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Roy, Roshni; Ramamoorthy, Senthilkumar; Shapiro, Benjamin D; Kaileh, Mary; Hernandez, Dena; Sarantopoulou, Dimitra; Arepalli, Sampath; Boller, Sö Ren; Singh, Amit; Bektas, Arsun; Kim, Jaekwan; Moore, Ann Zenobia; Tanaka, Toshiko; McKelvey, Julia; Zukley, Linda; Nguyen, Cuong; Wallace, Tonya; Dunn, Christopher; Wersto, Robert; Wood, William; Piao, Yulan; Becker, Kevin G; Coletta, Christopher; De, Supriyo; Sen, Jyoti Misra; Battle, Alexis; Weng, Nan-Ping; Grosschedl, Rudolf; Ferrucci, Luigi; Sen, Ranjan.

Immunity; 55(6): 1135, 2022 Jun 14.

Artículo en Inglés | MEDLINE | ID: mdl-35704994

8.

Two forms of loops generate the chromatin conformation of the immunoglobulin heavy-chain gene locus.

Guo, Changying; Gerasimova, Tatiana; Hao, Haiping; Ivanova, Irina; Chakraborty, Tirtha; Selimyan, Roza; Oltz, Eugene M; Sen, Ranjan.

Cell; 147(2): 332-43, 2011 Oct 14.

Artículo en Inglés | MEDLINE | ID: mdl-21982154

9.

Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus.

Qiu, Xiang; Kumari, Gita; Gerasimova, Tatiana; Du, Hansen; Labaran, Lawal; Singh, Amit; De, Supriyo; Wood, William H; Becker, Kevin G; Zhou, Weiqiang; Ji, Hongkai; Sen, Ranjan.

Mol Cell; 70(1): 21-33.e6, 2018 04 05.

Artículo en Inglés | MEDLINE | ID: mdl-29576529

10.

A Pioneer's Tail.

Sen, Ranjan.

Immunity; 44(3): 516-518, 2016 Mar 15.

Artículo en Inglés | MEDLINE | ID: mdl-26982358

11.

Postmitotic G1 phase survivin drives mitogen-independent cell division of B lymphocytes.

Singh, Amit; Spitzer, Matthew H; Joy, Jaimy P; Kaileh, Mary; Qiu, Xiang; Nolan, Garry P; Sen, Ranjan.

Proc Natl Acad Sci U S A; 119(18): e2115567119, 2022 05 03.

Artículo en Inglés | MEDLINE | ID: mdl-35476510

12.

Peptides designed from a bacteriophage capsid protein function as synthetic transcription repressors.

Sharma, Pankaj V; Jain, Sriyans; Sen, Ranjan.

J Biol Chem; 299(12): 105373, 2023 Dec.

Artículo en Inglés | MEDLINE | ID: mdl-37865318

13.

Localized epigenetic changes induced by DH recombination restricts recombinase to DJH junctions.

Subrahmanyam, Ramesh; Du, Hansen; Ivanova, Irina; Chakraborty, Tirtha; Ji, Yanhong; Zhang, Yu; Alt, Frederick W; Schatz, David G; Sen, Ranjan.

Nat Immunol; 13(12): 1205-12, 2012 Dec.

Artículo en Inglés | MEDLINE | ID: mdl-23104096

14.

Evolving adaptive immunity.

Lovely, Geoffrey A; Sen, Ranjan.

Genes Dev; 30(8): 873-5, 2016 Apr 15.

Artículo en Inglés | MEDLINE | ID: mdl-27083993

15.

In vivo regulation of bacterial Rho-dependent transcription termination by the nascent RNA.

Chhakchhuak, Passong Immanual R; Sen, Ranjan.

J Biol Chem; 298(6): 102001, 2022 06.

Artículo en Inglés | MEDLINE | ID: mdl-35500654

16.

A structural hierarchy mediated by multiple nuclear factors establishes IgH locus conformation.

Gerasimova, Tatiana; Guo, Changying; Ghosh, Amalendu; Qiu, Xiang; Montefiori, Lindsey; Verma-Gaur, Jiyoti; Choi, Nancy M; Feeney, Ann J; Sen, Ranjan.

Genes Dev; 29(16): 1683-95, 2015 Aug 15.

Artículo en Inglés | MEDLINE | ID: mdl-26302788

17.

Design of novel peptide inhibitors against the conserved bacterial transcription terminator, Rho.

Ghosh, Gairika; Sharma, Pankaj V; Kumar, Amit; Jain, Sriyans; Sen, Ranjan.

J Biol Chem; 296: 100653, 2021.

Artículo en Inglés | MEDLINE | ID: mdl-33845047

18.

Rho Protein: Roles and Mechanisms.

Mitra, Pallabi; Ghosh, Gairika; Hafeezunnisa, Md; Sen, Ranjan.

Annu Rev Microbiol; 71: 687-709, 2017 09 08.

Artículo en Inglés | MEDLINE | ID: mdl-28731845

19.

Multimode Mamyshev oscillator.

Haig, Henry; Sidorenko, Pavel; Dhar, Anirban; Choudhury, Nilotpal; Sen, Ranjan; Christodoulides, Demetrios; Wise, Frank.

Opt Lett; 47(1): 46-49, 2022 Jan 01.

Artículo en Inglés | MEDLINE | ID: mdl-34951879

20.

YY1 control of mitochondrial-related genes does not account for regulation of immunoglobulin class switch recombination in mice.

Nandi, Satabdi; Liang, Guanxiang; Sindhava, Vishal; Angireddy, Rajesh; Basu, Arindam; Banerjee, Sarmistha; Hodawadekar, Suchita; Zhang, Yue; Avadhani, Narayan G; Sen, Ranjan; Atchison, Michael L.

Eur J Immunol; 50(6): 822-838, 2020 06.

Artículo en Inglés | MEDLINE | ID: mdl-32092784

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NF-κB subunits direct kinetically distinct transcriptional cascades in antigen receptor-activated B cells.

Phage display of environmental protein toxins and virulence factors reveals the prevalence, persistence, and genetics of antibody responses.

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Architectural protein subclasses shape 3D organization of genomes during lineage commitment.

The dynamic changes in cytokine responses in COVID-19: a snapshot of the current state of knowledge.

Transcription, splicing, and release: are we there yet?

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Two forms of loops generate the chromatin conformation of the immunoglobulin heavy-chain gene locus.

Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus.

A Pioneer's Tail.

Postmitotic G1 phase survivin drives mitogen-independent cell division of B lymphocytes.

Peptides designed from a bacteriophage capsid protein function as synthetic transcription repressors.

Localized epigenetic changes induced by DH recombination restricts recombinase to DJH junctions.

Evolving adaptive immunity.

In vivo regulation of bacterial Rho-dependent transcription termination by the nascent RNA.

A structural hierarchy mediated by multiple nuclear factors establishes IgH locus conformation.

Design of novel peptide inhibitors against the conserved bacterial transcription terminator, Rho.

Rho Protein: Roles and Mechanisms.

Multimode Mamyshev oscillator.

YY1 control of mitochondrial-related genes does not account for regulation of immunoglobulin class switch recombination in mice.