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1.
Proc Natl Acad Sci U S A ; 121(23): e2315363121, 2024 Jun 04.
Artículo en Inglés | MEDLINE | ID: mdl-38805281

RESUMEN

Regulatory T cells (Tregs) are central in controlling immune responses, and dysregulation of their function can lead to autoimmune disorders or cancer. Despite extensive studies on Tregs, the basis of epigenetic regulation of human Treg development and function is incompletely understood. Long intergenic noncoding RNAs (lincRNA)s are important for shaping and maintaining the epigenetic landscape in different cell types. In this study, we identified a gene on the chromosome 6p25.3 locus, encoding a lincRNA, that was up-regulated during early differentiation of human Tregs. The lincRNA regulated the expression of interleukin-2 receptor alpha (IL2RA), and we named it the lincRNA regulator of IL2RA (LIRIL2R). Through transcriptomics, epigenomics, and proteomics analysis of LIRIL2R-deficient Tregs, coupled with global profiling of LIRIL2R binding sites using chromatin isolation by RNA purification, followed by sequencing, we identified IL2RA as a target of LIRIL2R. This nuclear lincRNA binds upstream of the IL2RA locus and regulates its epigenetic landscape and transcription. CRISPR-mediated deletion of the LIRIL2R-bound region at the IL2RA locus resulted in reduced IL2RA expression. Notably, LIRIL2R deficiency led to reduced expression of Treg-signature genes (e.g., FOXP3, CTLA4, and PDCD1), upregulation of genes associated with effector T cells (e.g., SATB1 and GATA3), and loss of Treg-mediated suppression.


Asunto(s)
Factores de Transcripción Forkhead , Subunidad alfa del Receptor de Interleucina-2 , ARN Largo no Codificante , Linfocitos T Reguladores , Humanos , ARN Largo no Codificante/genética , ARN Largo no Codificante/metabolismo , Linfocitos T Reguladores/inmunología , Linfocitos T Reguladores/metabolismo , Factores de Transcripción Forkhead/genética , Factores de Transcripción Forkhead/metabolismo , Subunidad alfa del Receptor de Interleucina-2/genética , Subunidad alfa del Receptor de Interleucina-2/metabolismo , Epigénesis Genética , Regulación de la Expresión Génica , Diferenciación Celular/genética
2.
Photosynth Res ; 160(2-3): 111-124, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38700726

RESUMEN

Accurate estimation of photosynthetic parameters is essential for understanding plant physiological limitations and responses to environmental factors from the leaf to the global scale. Gas exchange is a useful tool to measure responses of net CO2 assimilation (A) to internal CO2 concentration (Ci), a necessary step in estimating photosynthetic parameters including the maximum rate of carboxylation (Vcmax) and the electron transport rate (Jmax). However, species and environmental conditions of low stomatal conductance (gsw) reduce the signal-to-noise ratio of gas exchange, challenging estimations of Ci. Previous works showed that not considering cuticular conductance to water (gcw) can lead to significant errors in estimating Ci, because it has a different effect on total conductance to CO2 (gtc) than does gsw. Here we present a systematic assessment of the need for incorporating gcw into Ci estimates. In this study we modeled the effect of gcw and of instrumental noise and quantified these effects on photosynthetic parameters in the cases of four species with varying gsw and gcw, measured using steady-state and constant ramping techniques, like the rapid A/Ci response method. We show that not accounting for gcw quantitatively influences Ci and the resulting Vcmax and Jmax, particularly when gcw exceeds 7% of the total conductance to water. The influence of gcw was not limited to low gsw species, highlighting the importance of species-specific knowledge before assessing A/Ci curves. Furthermore, at low gsw instrumental noise can affect Ci estimation, but the effect of instrumental noise can be minimized using constant-ramping rather than steady-state techniques. By incorporating these considerations, more precise measurements and interpretations of photosynthetic parameters can be obtained in a broader range of species and environmental conditions.


Asunto(s)
Fotosíntesis , Estomas de Plantas , Fotosíntesis/fisiología , Estomas de Plantas/fisiología , Dióxido de Carbono/metabolismo , Agua/metabolismo , Hojas de la Planta/fisiología , Hojas de la Planta/metabolismo
3.
Physiol Plant ; 176(3): e14304, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38686664

RESUMEN

Source-sink balance in plants determines carbon distribution, and altering it can impact carbon fixation, transport, and allocation. We aimed to investigate the effect of altered source-sink ratios on carbon fixation, transport, and distribution in 'Valencia' sweet orange (Citrus x sinensis) by various defoliation treatments (0%, 33%, 66%, and 83% leaf removal). Gas exchange parameters were measured on 0 and 10 days after defoliation using A/Ci response curves, and leaf export was measured two days after defoliation using radioisotope tracer techniques. Greater defoliation increased the maximum rate of carboxylation (Vcmax), electron transport rate (J1200), and triose-phosphate utilization rate (TPU). Leaf export was unaffected by defoliation but increased in leaves closer to the shoot apex. Basipetal translocation velocity in the trunk remained unaltered, indicating that more photosynthates remained in the shoot rather than being transported directly to the root sink. Defoliated plants initiated more new flush shoots but accumulated less shoot biomass per plant after 8 weeks. Carbon allocation to fine roots was smaller in defoliated plants, suggesting defoliation led to retention of carbohydrates in aboveground organs such as the trunk and other shoots from previous growing cycles. In conclusion, the low source-sink ratio increased carbon fixation without impacting individual leaf export in citrus. The results suggest that intermediate sinks such as the aboveground perennial organs play a role in mediating the translocation velocity. Further research is necessary to better understand the dynamics of source-sink regulation in citrus trees.


Asunto(s)
Carbono , Citrus , Fotosíntesis , Hojas de la Planta , Hojas de la Planta/metabolismo , Carbono/metabolismo , Fotosíntesis/fisiología , Citrus/metabolismo , Citrus/fisiología , Citrus/crecimiento & desarrollo , Ciclo del Carbono , Raíces de Plantas/metabolismo , Raíces de Plantas/crecimiento & desarrollo , Brotes de la Planta/metabolismo , Brotes de la Planta/crecimiento & desarrollo , Biomasa , Árboles/metabolismo , Árboles/fisiología , Citrus sinensis/metabolismo , Citrus sinensis/crecimiento & desarrollo , Citrus sinensis/fisiología
4.
Appl Microbiol Biotechnol ; 108(1): 33, 2024 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-38175234

RESUMEN

Due to the limited resources and environmental problems associated with fossil fuels, there is a growing interest in utilizing renewable resources for the production of biofuels through microbial fermentation. Isobutanol is a promising biofuel that could potentially replace gasoline. However, its production efficiency is currently limited by the use of naturally isolated microorganisms. These naturally isolated microorganisms often encounter problems such as a limited range of substrates, low tolerance to solvents or inhibitors, feedback inhibition, and an imbalanced redox state. This makes it difficult to improve their production efficiency through traditional process optimization methods. Fortunately, recent advancements in genetic engineering technologies have made it possible to enhance microbial hosts for the increased production of isobutanol from renewable resources. This review provides a summary of the strategies and synthetic biology approaches that have been employed in the past few years to improve naturally isolated or non-natural microbial hosts for the enhanced production of isobutanol by utilizing different renewable resources. Furthermore, it also discusses the challenges that are faced by engineered microbial hosts and presents future perspectives to enhancing isobutanol production. KEY POINTS: • Promising potential of isobutanol to replace gasoline • Engineering of native and non-native microbial host for isobutanol production • Challenges and opportunities for enhanced isobutanol production.


Asunto(s)
Biocombustibles , Gasolina , Butanoles , Clonación Molecular
5.
Appl Microbiol Biotechnol ; 108(1): 25, 2024 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-38157005

RESUMEN

Hexabromocyclododecane (HBCD) is a widely used brominated flame retardant; however, it is a persistent organic pollutant as well as affects the human thyroid hormones and causes cancer. However, the degradation of HBCD has received little attention from researchers. Due to its bioaccumulative and hazardous properties, an appropriate strategy for its remediation is required. In this study, we investigated the biodegradation of HBCD using Shewanella oneidensis MR-1 under optimized conditions. The Box-Behnken design (BBD) was implemented for the optimization of the physical degradation parameters of HBCD. S. oneidensis MR-1 showed the best degradation performance at a temperature of 30 °C, pH 7, and agitation speed of 115 rpm, with an HBCD concentration of 1125 µg/L in mineral salt medium (MSM). The strain tolerated up to 2000 µg/L HBCD. Gas chromatography-mass spectrometry analysis identified three intermediates, including 2-bromo dodecane, 2,7,10-trimethyldodecane, and 4-methyl-1-decene. The results provide an insightful understanding of the biodegradation of HBCD by S. oneidensis MR-1 under optimized conditions and could pave the way for further eco-friendly applications. KEY POINTS: • HBCD biodegradation by Shewanella oneidensis • Optimization of HBCD biodegradation by the Box-Behnken analysis • Identification of useful metabolites from HBCD degradation.


Asunto(s)
Retardadores de Llama , Hidrocarburos Bromados , Shewanella , Humanos , Biodegradación Ambiental , Hidrocarburos Bromados/química , Hidrocarburos Bromados/metabolismo , Shewanella/metabolismo , Retardadores de Llama/metabolismo
6.
Pak J Med Sci ; 40(4): 767-772, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38544997

RESUMEN

Objective: To evaluate the awareness, attitude and knowledge of cardiopulmonary resuscitation (CPR) among university-enrolled medical and non-medical undergraduate students of Pakistan. Methods: Cross-sectional online survey-based study was conducted across institutes in Pakistan from December, 2022 to January, 2023. The study involved university-enrolled undergraduate students across the country. The structured questionnaire was disseminated via Google forms. For statistical analysis, SPSS version 20 was used to analyze the data by applying independent sample t-tests and ANOVA. Results: A total of 249 responses were received. After the exclusion of two responses, the overall awareness score of participants was found to be 2.49 ± 1.33, attitude score of 4.09 ± 1.74, and knowledge score of 3.51 ± 2.13. Female respondents, medical students, unmarried (single), private institutes, and respondents with educated parents achieved relatively higher scores. The overall difference in awareness scores among different regions of Pakistan was also significant (p <0.05). Gender, region, and parental literacy rate also showed effects on participants' basic life support (BLS) and CPR knowledge (p <0.05). Conclusions: Overall knowledge and awareness were unsatisfactory and inadequate in university-enrolled undergraduate students, with no one getting a complete score on very basic knowledge questions. Significant differences in awareness, attitude, and knowledge among different regions, genders, and parental literacy rates were found.

7.
J Pak Med Assoc ; 73(11): 2247-2250, 2023 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-38013538

RESUMEN

There are 59 dental colleges in Pakistan out of which 17 are in the public sector and 42 in private. However, only a few use problem-based learning methods, though it is a popular strategy in dental education all around the world. This study aims to assess problem-based learning model in dental education and explore the barriers of its implementation in a private dental college of Karachi. Qualitative case-study approach was employed. The philosophical stance used was critical realism. Qualitative data was collected by participant observation, video recorded observation and video elicited semi-structured in-depth interviews of five faculty members and 15 students. Results showed that students were more interested in interactive sessions while faculty members were in favour of problem-based learning sessions. Thematic analysis was done to generate themes. This research applies reproduction method to explain the necessary and contingent relations and causal powers. Lack of motivation among students and lack of faculty dedication are causal mechanisms of barriers in the implementation of problem-based learning.


Asunto(s)
Docentes , Aprendizaje Basado en Problemas , Humanos , Investigación Cualitativa , Estudiantes de Odontología , Educación en Odontología/métodos
8.
J Theor Biol ; 532: 110914, 2022 01 07.
Artículo en Inglés | MEDLINE | ID: mdl-34582825

RESUMEN

p53 protein plays an essential role in protecting the genomic integrity of mammalian cells. A drastic decrease in the amount of p53 protein has been observed in cancerous cells. By using Nutlin-based small molecule drugs, the concentration of p53 can be restored to the desired level. This paper presents the drug-dosage design for p53 pathway, based on a control-oriented nonlinear model. A chattering free sliding mode control (CFSMC) strategy is employed to track the desired trajectory of p53 concentration for both of its dynamic behaviors, i.e., sustained and oscillatory responses. A gain-scheduled modified Utkin observer (GSMUO) is designed for robust state reconstruction and disturbance estimation. The simulation results show that CFSMC and GSMUO exhibit desired robustness and performance properties in the presence of parametric variations, an input disturbance and measurement noise. Moreover, a comprehensive simulation study, along with a detailed quantitative analysis is performed to compare CFSMC-GSMUO with four different techniques: a sliding mode control (SMC) with an equivalent control based sliding mode observer (SMO) and GSMUO, respectively, and a dynamic sliding mode control (DSMC) with SMO and GSMUO, respectively. The analysis demonstrates that the tracking error and utilization of the control energy is the least in the case of CFSMC-GSMUO as compared to its counterparts.


Asunto(s)
Algoritmos , Proteína p53 Supresora de Tumor , Simulación por Computador , Dinámicas no Lineales
9.
Microb Cell Fact ; 21(1): 154, 2022 Aug 06.
Artículo en Inglés | MEDLINE | ID: mdl-35933385

RESUMEN

BACKGROUND: Sugar hydrolysates from lignocellulosic biomass are majorly composed of glucose and xylose that can be fermented to biofuels. Bacteria, despite having the natural ability to consume xylose are unable to consume it in presence of glucose due to a carbon catabolite repression (CCR) mechanism. This leads to overall reduced productivity as well as incomplete xylose utilization due to ethanol build-up from glucose utilization. In our effort to develop a strain for simultaneous fermentation of glucose and xylose into ethanol, we deleted ptsG in ethanologenic E. coli SSK42 to make it deficient in CCR and performed adaptive laboratory evolution to achieve accelerated growth rate, sugar consumption and ethanol production. Finally, we performed proteomics study to identify changes that might have been responsible for the observed improved phenotype of the evolved strain. RESULTS: The parental strain of SSK42, i.e., wild-type E. coli B, did not co-utilize glucose and xylose as expected. After deleting the ptsG gene encoding the EIIBCGlc subunit of PTS system, glucose consumption is severely affected in wild-type E. coli B. However, the ethanologenic, SSK42 strain, which was evolved in our earlier study on both glucose and xylose, didn't show such a drastic effect of EIIBCGlc deletion, instead consumed glucose first, followed by xylose without delay for switching from one sugar to another. To improve growth on xylose and co-utilization capabilities, the ptsG deleted SSK42 was evolved on xylose. The strain evolved for 78 generations, strain SCD78, displayed significant co-utilization of glucose and xylose sugars. At the bioreactor level, the strain SCD78 produced 3-times the ethanol titer of the parent strain with significant glucose-xylose co-utilization. The rate of glucose and xylose consumption also increased 3.4-fold and 3-fold, respectively. Proteome data indicates significant upregulation of TCA cycle proteins, respiration-related proteins, and some transporters, which may have a role in increasing the total sugar consumption and co-utilization of sugars. CONCLUSION: Through adaptive evolution, we have obtained a strain that has a significant glucose-xylose co-utilization phenotype with 3-fold higher total sugar consumption rate and ethanol production rate compared to the unevolved strain. This study also points out that adaptation on xylose is enough to impart glucose-xylose co-utilization property in CCR compromised ethanologenic strain SSK42.


Asunto(s)
Represión Catabólica , Xilosa , Azúcares de la Dieta/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Etanol/metabolismo , Fermentación , Glucosa/metabolismo , Azúcares/metabolismo , Xilosa/metabolismo
10.
Sensors (Basel) ; 22(21)2022 Nov 06.
Artículo en Inglés | MEDLINE | ID: mdl-36366243

RESUMEN

Future wireless networks will be required to provide more wireless services at higher data rates and with global coverage. However, existing homogeneous wireless networks, such as cellular and satellite networks, may not be able to meet such requirements individually, especially in remote terrain, including seas and mountains. One possible solution is to use diversified wireless networks that can exploit the inter-connectivity between satellites, aerial base stations (BSs), and terrestrial BSs over inter-connected space, ground, and aerial networks. Hence, enabling wireless communication in one integrated network has attracted both the industry and the research fraternities. In this work, we provide a comprehensive survey of the most recent work on hybrid satellite-terrestrial networks (HSTNs), focusing on system architecture, performance analysis, design optimization, and secure communication schemes for different cooperative and cognitive HSTN network architectures. Different key technologies are compared. Based on this comparison, several open issues for future research are discussed.


Asunto(s)
Redes de Comunicación de Computadores , Tecnología Inalámbrica , Tecnología , Comunicación
11.
J Gastroenterol Hepatol ; 36(4): 918-926, 2021 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-32876952

RESUMEN

The coronavirus disease 2019 pandemic has engulfed the world and is the highlight of medical community at this time. As humanity fights the battle against this virus, questions are arising regarding the appropriate management of at risk patient populations. The immunocompromised cohort is particularly susceptible to this infection, and we have tried to explore the medical management of one such group, which is composed of individuals with inflammatory bowel disease (IBD). There is limited data on the management of IBD during the ongoing pandemic. Several medical societies have put forth suggestions on how to manage immunocompromised patients in order to minimize risk of developing coronavirus disease 2019. This review aims to present available recommendations from experts and provides an insight on preventive and therapeutic strategies that can be implemented for the medical management of patients with IBD. We anticipate that as more information arises, new guidelines will emerge.


Asunto(s)
COVID-19 , Inmunosupresores/uso terapéutico , Enfermedades Inflamatorias del Intestino , COVID-19/epidemiología , COVID-19/inmunología , COVID-19/prevención & control , Manejo de la Enfermedad , Humanos , Enfermedades Inflamatorias del Intestino/tratamiento farmacológico , Enfermedades Inflamatorias del Intestino/epidemiología , Enfermedades Inflamatorias del Intestino/inmunología , Ajuste de Riesgo , SARS-CoV-2
12.
Int J Mol Sci ; 22(4)2021 Feb 12.
Artículo en Inglés | MEDLINE | ID: mdl-33673043

RESUMEN

The productivity of agricultural produce is fairly dependent on the availability of nutrients and efficient use. Magnesium (Mg2+) is an essential macronutrient of living cells and is the second most prevalent free divalent cation in plants. Mg2+ plays a role in several physiological processes that support plant growth and development. However, it has been largely forgotten in fertilization management strategies to increase crop production, which leads to severe reductions in plant growth and yield. In this review, we discuss how the Mg2+ shortage induces several responses in plants at different levels: morphological, physiological, biochemical and molecular. Additionally, the Mg2+ uptake and transport mechanisms in different cellular organelles and the role of Mg2+ transporters in regulating Mg2+ homeostasis are also discussed. Overall, in this review, we critically summarize the available information about the responses of Mg deficiency on plant growth and development, which would facilitate plant scientists to create Mg2+-deficiency-resilient crops through agronomic and genetic biofortification.


Asunto(s)
Biofortificación , Productos Agrícolas/crecimiento & desarrollo , Magnesio/metabolismo , Desarrollo de la Planta , Transporte Biológico
13.
J Exp Bot ; 71(19): 5935-5947, 2020 10 07.
Artículo en Inglés | MEDLINE | ID: mdl-32589717

RESUMEN

The aim of this work was to evaluate the general role of the vacuolar pyrophosphatase proton pump (V-PPase) in sucrose accumulation in citrus species. First, three citrus V-PPase genes, designated CsVPP-1, CsVPP-2, and CsVPP-4, were identified in the citrus genome. CsVPP-1 and CsVPP-2 belonging to citrus type I V-PPase genes are targeted to the tonoplast, and CsVPP-4 belonging to citrus type II V-PPase genes is located in the Golgi bodies. Moreover, there was a significantly positive correlation between transcript levels of type I V-PPase genes and sucrose, rather than hexose, content in fruits of seven citrus cultivars. Drought and abscisic acid treatments significantly induced the CsVPP-1 and CsVPP-2 transcript levels, as well as the sucrose content. The overexpression of type I V-PPase genes significantly increased PPase activity, decreased pyrophosphate contents, and increased sucrose contents, whereas V-PPase inhibition produced the opposite effect in both citrus fruits and leaves. Furthermore, altering the expression levels of type I V-PPase genes significantly influenced the transcript levels of sucrose transporter genes. Taken together, this study demonstrated that CsVPP-1 and CsVPP-2 play key roles in sucrose storage in the vacuole by regulating pyrophosphate homeostasis, ultimately the sucrose biosynthesis and transcript levels of sucrose transport genes, providing a novel lead for engineering or breeding modified taste in citrus and other fruits.


Asunto(s)
Citrus , Pirofosfatasa Inorgánica , Citrus/genética , Citrus/metabolismo , Pirofosfatasa Inorgánica/genética , Pirofosfatasa Inorgánica/metabolismo , Fitomejoramiento , Sacarosa , Vacuolas/metabolismo
14.
Microb Cell Fact ; 19(1): 153, 2020 Jul 28.
Artículo en Inglés | MEDLINE | ID: mdl-32723338

RESUMEN

BACKGROUND: Furfural and 5-hydroxymethyl furfural (5-HMF) are key furan inhibitors that are generated due to breakdown of lignocellulosic sugars at high temperature and acidic treatment conditions. Both furfural and 5-HMF act in a synergistic manner to inhibit microbial metabolism and resistance to both is a desirable characteristic for efficient conversion of lignocellulosic carbon to ethanol. Genetic manipulations targeted toward increasing cellular NADPH pools have successfully imparted tolerance against furfural and 5-HMF. In present study, deletion of pgi gene as a strategy to augment carbon flow through pentose phosphate pathway (PPP) was studied in ethanologenic Escherichia coli strain SSK101 to impart tolerance towards either furfural or 5-HMFor both inhibitors together. RESULTS: A key gene of EMP pathway, pgi, was deleted in an ethanologenic E. coli strain SSK42 to yield strain SSK101. In presence of 1 g/L furfural in minimal AM1 media, the rate of biomass formation for strain SSK101 was up to 1.9-fold higher as compared to parent SSK42 strain, and it was able to clear furfural in half the time. Tolerance to inhibitor was associated with glucose as carbon source and not xylose, and the tolerance advantage of SSK101 was neutralized in LB media. Bioreactor studies were performed under binary stress of furfural and 5-HMF (1 g/L each) and different glucose concentrations in a glucose-xylose mixture with final sugar concentration of 5.5%, mimicking major components of dilute acid treated biomass hydrolysate. In the mixture having 6 g/L and 12 g/L glucose, SSK101 strain produced ~ 18 g/L and 20 g/L ethanol, respectively. Interestingly, the maximum ethanol productivity was better at lower glucose load with 0.46 g/(L.h) between 96 and 120 h, as compared to higher glucose load where it was 0.33 g/(L.h) between 144 and 168 h. Importantly, parent strain SSK42 did not exhibit significant metabolic activity under similar conditions of inhibitor load and sugar concentration. CONCLUSIONS: E. coli strain SSK101 with pgi deletion had enhanced tolerance against both furfural and 5-HMF, which was associated with presence of glucose in media. Strain SSK101 also had improved fermentation characteristics under both hyperosmotic as well as binary stress of furfural and 5-HMF in media containing glucose-xylose mixture.


Asunto(s)
Disacáridos/metabolismo , Proteínas de Escherichia coli/genética , Escherichia coli/efectos de los fármacos , Escherichia coli/genética , Furaldehído/análogos & derivados , Eliminación de Gen , Glucosa-6-Fosfato Isomerasa/genética , Técnicas de Cultivo Celular por Lotes , Medios de Cultivo/química , Escherichia coli/metabolismo , Etanol/metabolismo , Furaldehído/farmacología , Glucosa/metabolismo , Vía de Pentosa Fosfato , Xilosa/metabolismo
15.
Mol Biol Rep ; 47(4): 2781-2791, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-32212013

RESUMEN

The accumulation of soluble sugars in fleshy fruits largely determines their sweetness or taste. A spontaneous sweet orange mutant 'Hong Anliu' (HAL, Citrus sinensis) accumulates low soluble sugar content in fruit juice sacs than its wild type, 'Anliu' (AL) orange; however, the cause of reduced sugar content in 'HAL' fruit remains unclear. In this study, sugar content and expression profiles of genes involved in sugar metabolism and transport were compared between 'HAL' and 'AL' fruit juice sacs. In both cultivars, fructose and glucose displayed the increasing trends with significantly lower contents in 'HAL' than 'AL' after 160 DAF; moreover, sucrose had a declining trend in 'HAL' and increasing trend in 'AL' with fruit development. On the other hand, transcript levels of VINV, CWINV1, CWINV2, SUS4, SUS5, SPS1, SPS2, VPP-1, VPP-2, and some sugar transporter genes were significantly decreased in 'HAL' compared with 'AL' after 100 DAF or 160 DAF. Interestingly, the transcript levels of SPS2 and SUT2 exhibited a similar trend as it was found for sucrose content in both cultivars. These results suggested that the low sugar accumulation in 'HAL' fruit JS is accompanied by the reduced sink strength, sucrose-synthesis ability, and vacuolar storage ability compared with 'AL'; reduction of CWINVs, VINV, SPS2, SUT2, VPP-1, and VPP-2 transcript levels possibly plays a key role in the low storage of soluble sugars in the vacuoles of mutant juice sacs.


Asunto(s)
Citrus sinensis/genética , Citrus sinensis/metabolismo , Azúcares/metabolismo , Metabolismo de los Hidratos de Carbono , Citrus/genética , Frutas/genética , Perfilación de la Expresión Génica/métodos , Regulación de la Expresión Génica de las Plantas/genética , Glucosa/metabolismo , Sacarosa/metabolismo , Transcriptoma/genética
16.
Appl Microbiol Biotechnol ; 104(1): 427-437, 2020 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-31822982

RESUMEN

Phenol accounts for a large proportion of the contamination in industrial wastewater discharged from chemical plants due to its wide use as a raw chemical. Residual phenol waste in water and soil significantly endangers human health and the natural environment. In this study, an Acinetobacter radioresistens strain, APH1, was isolated and identified for its efficient capability of utilizing phenol as sole carbon source for growth. A draft genome sequence containing 3,290,330 bases with 45 contigs was obtained, and 22 genes were found to be involved in phenol metabolism and 51 putative drug-resistance genes were annotated by genomic analysis. The optimal conditions for cell culture and phenol removal were determined to be 30 °C, pH 6.0, and a phenol concentration of 500 mg/L; the upper limit of phenol tolerance was 950 mg/L. Based on GC-MS analysis, the key metabolites including cis,cis-muconic acid, catechol, and succinic acid were detected. During bioremediation experiment using 450 mg/kg (dry weight) of phenol-contaminated soil, the strain APH1 removed 99% of the phenol within 3 days. According to microbial diversity analysis, the microbial abundance of Chungangia, Bacillus, Nitrospira, Lysinibacillus, and Planomicrobium increased after the addition of phenol. Furthermore, at day 23, the abundance of strain APH1 was greatly reduced, and the microbial diversity and structure of the whole microbial community were gradually recovered, indicating that strain APH1 would not affect this microbial ecosystem. These findings provide insights into the bioremediation of soil contaminated with phenol.


Asunto(s)
Acinetobacter/metabolismo , Carbono/metabolismo , Fenol/metabolismo , Microbiología del Suelo , Suelo/química , Acinetobacter/genética , Biodegradación Ambiental , Variación Genética , Genoma Bacteriano , Concentración de Iones de Hidrógeno , Aguas Residuales/química
17.
Sensors (Basel) ; 20(21)2020 Oct 30.
Artículo en Inglés | MEDLINE | ID: mdl-33143363

RESUMEN

Due to large spectral efficiency and low power consumption, the Massive Multiple-Input-Multiple-Output (MIMO) became a promising technology for the 5G system. However, pilot contamination (PC) limits the performance of massive MIMO systems. Therefore, two pilot scheduling schemes (i.e., Fractional Pilot Reuse (FPR) and asynchronous fractional pilot scheduling scheme (AFPS)) are proposed, which significantly mitigated the PC in the uplink time division duplex (TDD) massive MIMO system. In the FPR scheme, all the users are distributed into the central cell and edge cell users depending upon their signal to interference plus noise ratio (SINR). Further, the capacity of central and edge users is derived in terms of sum-rate, and the ideal number of the pilot is calculated which significantly maximized the sum rate. In the proposed AFPS scheme, the users are grouped into central users and edge users depending upon the interference they receive. The central users are assigned the same set of pilots because these users are less affected by interference, while the edge users are assigned the orthogonal pilots because these users are severely affected by interference. Consequently, the pilot overhead is reduced and inter-cell interference (ICI) is minimized. Further, results verify that the proposed schemes outperform the previous proposed traditional schemes, in terms of improved sum rates.

18.
Pak J Pharm Sci ; 33(4): 1711-1718, 2020 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33583806

RESUMEN

Vitamin D is essential element for growth and development of bones. The receptor of the metabolite of vitamin D known as "nuclear calcitriol" have been identified in tissues and is responsible for playing a wide range of biological processes. Calcidiol [25(OH) D3] corresponds to the storage space and the chief flowing metabolite of vitamin D3. Calcitriol 1-α-25-dihydroxycholecalciferol is formed in the kidney. Deficiency of vitamin D and lack of sun exposure has been found to cause unceasing illnesses together with various lethal cancers. At cellular level the mechanism of anticancer action of vitamin D has not been entirely implicated. For the setting off and regulation of particular genes, calcitriol-VDR-RXR complex attach to definite DNA fragments called as vitamin D response elements (VDREs). After binding with VDR, calcitriol performs its function by regulating the function of over and above 60 genes providing direction for antiproliferative, prodifferentiating and antimetastatic effects on cells to result in antiangiogenic property. Vitamin D deficiency is evaluated as level of calcidiol less than 20ng/mL, shortage to the level of 21-29 ng/mL, and adequacy level is 30ng/mL.


Asunto(s)
Neoplasias/tratamiento farmacológico , Vitamina D/farmacología , Calcitriol/farmacología , Proliferación Celular/efectos de los fármacos , ADN/metabolismo , Humanos , Metástasis de la Neoplasia/tratamiento farmacológico , Neoplasias/metabolismo , Receptores de Calcitriol/metabolismo
19.
Pak J Pharm Sci ; 33(6): 2497-2504, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-33867322

RESUMEN

Biosynthesis of zinc oxide nanoparticles (ZnO-NPs) using microalgae is novel and cost-effective approach. We studied production, molecular characterization, and antibacterial activity. Filtrates of isolated microalgae strain ZAA1 (MF140241), ZAA2 (MF114592) and ZAA3 (MF114594) were used. Incubation of these strains in 5mM solution of zinc nitrate was resulted in the synthesis of ZnO-NPs. Fourier-transform infrared, UV-visible spectroscopy and scanning electron microscopy were used to characterize the nanoparticles. Significant antibacterial activity of ZnO-NPs was measured against Escherichia coli, Staphylococcus aureus, Micrococcus luteus, Klebsiella pneumoniae and Citrobacter freundii. The microalgae mediated ZnO-NPs production is a successful procedure that can be used in a wide range of biomedical applications.


Asunto(s)
Antibacterianos/química , Antibacterianos/farmacología , Microalgas/fisiología , Óxido de Zinc/farmacología , Antibacterianos/síntesis química , Tecnología Química Verde/métodos , Nanopartículas del Metal/química , Microalgas/genética , Pruebas de Sensibilidad Microbiana , Microscopía Electrónica de Rastreo , Filogenia , ARN Ribosómico 16S , Espectrofotometría Ultravioleta , Espectroscopía Infrarroja por Transformada de Fourier , Óxido de Zinc/síntesis química
20.
Int J Neurosci ; 129(8): 746-753, 2019 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-30616495

RESUMEN

Objectives: Although there have been numerous studies conducted to better understand Parkinson's disease (PD), the epidemiology of its debilitating non-motor symptoms across different ethnicities remains understudied. Herein we explore the relationship between depression, anxiety and pain in PD patients of Caucasian or Indian ethnicity (PD Caucasians and PD Indians). Patients and Methods: All patients and healthy age and gender matched controls were assessed via semi-structured interviews for anxiety, pain and depression using structured questionnaires. Results: PD Indians did not differ from PD Caucasians on anxiety or depression. However, PD Caucasians were more likely to report aching pain by 80 times and dull pain by 108 times compared to PD Indians. PD Indians were 82% less likely to have pain interfering with social activities, and 90% less likely to have pain interfering with relations with others compared to PD Caucasians. Conclusion: Although an Indo-Caucasian difference may not be detected from mood dysfunction, important differences may exist from the influence of pain interfering with several dimensions of life.


Asunto(s)
Ansiedad/etnología , Depresión/etnología , Dolor/etnología , Enfermedad de Parkinson/etnología , Población Blanca/etnología , Anciano , Anciano de 80 o más Años , Ansiedad/etiología , Depresión/etiología , Femenino , Humanos , India/etnología , Masculino , Persona de Mediana Edad , Ontario/etnología , Dolor/etiología , Enfermedad de Parkinson/complicaciones
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