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1.
Toxicol Appl Pharmacol ; 380: 114695, 2019 10 01.
Artículo en Inglés | MEDLINE | ID: mdl-31394159

RESUMEN

A previously published human PBPK model for manganese (Mn) in infants and children has been updated with Mn in drinking water as an additional exposure source. Built upon the ability to capture differences in Mn source-specific regulation of intestinal uptake in nursing infants who are breast-fed and formula-fed, the updated model now describes the bioavailability of Mn from drinking water in children of ages 0-18. The age-related features, including the recommended age-specific Mn dietary intake, age-specific water consumption rates, and age-specific homeostasis of Mn, are based on the available human data and knowledge of the biology of essential-metal homeostasis. Model simulations suggest that the impact of adding drinking-water exposure to daily Mn exposure via dietary intake and ambient air inhalation in children is not greater than the impacts in adults, even at a drinking-water concentration that is 2 times higher than the USEPA's lifetime health advisory value. This conclusion was also valid for formula-fed infants who are considered at the highest potential exposure to Mn from drinking water compared to all other age groups. Our multi-route, multi-source Mn PBPK model for infants and children provides insights about the potential for Mn-related health effects on growing children and will thereby improve the level of confidence in properly interpreting Mn exposure-health effects relationships in children in human epidemiological studies.


Asunto(s)
Exposición Dietética/análisis , Agua Potable , Manganeso/farmacocinética , Modelos Biológicos , Contaminantes Químicos del Agua/farmacocinética , Adolescente , Niño , Preescolar , Femenino , Humanos , Lactante , Fórmulas Infantiles , Recién Nacido , Masculino , Leche Humana
2.
J Fish Biol ; 89(3): 1851-6, 2016 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-27325497

RESUMEN

Using an acoustic underwater camera (Dual Frequency IDentification SONar, DIDSON), the abundance and direction of movement of fishes > 80 mm total length (LT ) in the mouth of a small South African estuary during spring and neap tidal cycles were observed. While the sizes of fishes recorded were consistent across both tide cycles, the number of fishes passing the camera was significantly greater during the smaller neap tides. Schooling behaviour was more pronounced for fishes that were travelling into the estuary compared to fishes swimming towards the ocean.


Asunto(s)
Estuarios , Peces , Olas de Marea , Animales , Dinámica Poblacional , Estaciones del Año , Sudáfrica , Natación
3.
J Fish Biol ; 86(2): 463-483, 2015 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-25613077

RESUMEN

Latitudinal variation in the reproductive characteristics of a temperate marine herbivore, rock blackfish Girella elevata, was examined from three regions of the south-eastern Australian coast. Biological sampling covered 780 km of coastline, including the majority of the species distribution. The sampling range incorporated three distinct oceanographic regions of the East Australian Current, a poleward-flowing western boundary current of the Southern Pacific Gyre and climate-change hotspot. Girella elevata are a highly fecund, group synchronous (multiple batch)-spawner. Mean fork length (LF ) and age at maturity were greater for females than males within all regions, with both male and female G. elevata of the southern region maturing at a greater size and age than those from the central region. Estimates of batch fecundity (FB ) were greatest in the northern and southern regions, relative to the central region where growth rates were greatest. Significant positive relationships were observed between FB and LF , and FB and total fish mass. Gonado-somatic indices indicated latitudinal synchrony in spawning seasonality between G. elevata at higher latitudes, spawning in the late austral spring and summer. A late or prolonged spawning period is evident for G. elevata from the northern region. Juvenile recruitment to intertidal rock pools within the central and southern regions was synchronous with the spawning season, however, no juveniles were found within the northern region. The implications of latitudinal variation in reproductive characteristics are discussed in the context of climate and oceanographic conditions of south-east Australia.

4.
Br J Cancer ; 110(3): 636-47, 2014 Feb 04.
Artículo en Inglés | MEDLINE | ID: mdl-24346283

RESUMEN

BACKGROUND: microRNA-9 is a key regulator of neuronal development aberrantly expressed in brain malignancies, including medulloblastoma. The mechanisms by which microRNA-9 contributes to medulloblastoma pathogenesis remain unclear, and factors that regulate this process have not been delineated. METHODS: Expression and methylation status of microRNA-9 in medulloblastoma cell lines and primary samples were analysed. The association of microRNA-9 expression with medulloblastoma patients' clinical outcome was assessed, and the impact of microRNA-9 restoration was functionally validated in medulloblastoma cells. RESULTS: microRNA-9 expression is repressed in a large subset of MB samples compared with normal fetal cerebellum. Low microRNA-9 expression correlates significantly with the diagnosis of unfavourable histopathological variants and with poor clinical outcome. microRNA-9 silencing occurs via cancer-specific CpG island hypermethylation. HES1 was identified as a direct target of microRNA-9 in medulloblastoma, and restoration of microRNA-9 was shown to trigger cell cycle arrest, to inhibit clonal growth and to promote medulloblastoma cell differentiation. CONCLUSIONS: microRNA-9 is a methylation-silenced tumour suppressor that could be a potential candidate predictive marker for poor prognosis of medulloblastoma. Loss of microRNA-9 may confer a proliferative advantage to tumour cells, and it could possibly contribute to disease pathogenesis. Thus, re-expression of microRNA-9 may constitute a novel epigenetic regulation strategy against medulloblastoma.


Asunto(s)
Factores de Transcripción con Motivo Hélice-Asa-Hélice Básico/biosíntesis , Neoplasias Encefálicas/genética , Epigénesis Genética , Proteínas de Homeodominio/biosíntesis , Meduloblastoma/genética , MicroARNs/genética , Adulto , Anciano , Factores de Transcripción con Motivo Hélice-Asa-Hélice Básico/genética , Neoplasias Encefálicas/patología , Diferenciación Celular/genética , Línea Celular Tumoral , Proliferación Celular , Cerebelo/metabolismo , Islas de CpG/genética , Femenino , Feto/metabolismo , Silenciador del Gen , Proteínas de Homeodominio/genética , Humanos , Masculino , Meduloblastoma/patología , MicroARNs/metabolismo , Pronóstico , Regiones Promotoras Genéticas , Factor de Transcripción HES-1
5.
Integr Org Biol ; 6(1): obae014, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38741667

RESUMEN

The hyoid apparatus of tetrapods is highly diverse in its morphology. It plays an important role in feeding, breathing, sound production, and various other behaviors. Among turtles, the diversity of the hyoid apparatus has been recurrently linked to their habitat. The ossification of the hyoid corpus is often the main trait used in correlations with "niche" occupancy, an ossified corpus being associated with aquatic environments and a cartilaginous corpus with terrestrial life. Most studies conducted so far have focused on species belonging to Testudinoidea, the clade that occupies the biggest diversity of habitats (i.e., terrestrial, semi-terrestrial, and aquatic animals), while other turtle lineages have been largely understudied. We assessed the adult anatomy of the hyoid apparatus of 92 turtle species from all "families", together with ossification sequences from embryological series of 11 species, some described for the first time here. Using nearly 40 different discrete anatomical characters, we discuss the evolutionary patterns and the biological significance of morphological transformations in the turtle hyoid elements. Morphological changes are strongly associated to feeding modes, with several instances of convergent evolution within and outside the Testudines clade, and are not as strongly connected to habitat as previously thought. Some of the hyoid character states we describe are diagnostic of specific turtle clades, thus providing phylogenetically relevant information.


El aparato hyoideo de los tetrápodos es muy diverso en su morfología. El mismo desempeña un papel importante en la alimentación, la respiración, la producción de sonidos y otras funciones. En las tortugas, la diversidad del aparato hyoideo se ha relacionado con el hábitat. La osificación del cuerpo hyoideo es a menudo el rasgo principal utilizado en correlaciones con la ocupación de "nichos"; un cuerpo osificado se asocia con ambientes acuáticos y un cuerpo cartilaginoso con la vida terrestre. La mayoría de los estudios realizados se han centrado en especies pertenecientes a Testudinoidea, el clado que ocupa la mayor diversidad de hábitats (terrestre, semiterrestre y acuático), mientras que otros linajes de tortugas han sido poco estudiados. Evaluamos la anatomía adulta del aparato hyoideo de 92 especies de tortugas de todas las "familias", junto con secuencias de osificación de series embriológicas de once especies, algunas descritas por primera vez aquí. Utilizando casi 40 caracteres anatómicos discretos diferentes, discutimos los patrones evolutivos y el significado biológico de lastransformaciones morfológicas en los elementos hyoideos de las tortugas. Los cambios morfológicos están asociados con los modos de alimentación, con varios casos de convergencia dentro y fuera del clado Testudines; la asociación con el hábitat no es tan robusta como se ha hipotetizado. Algunos de los estados de caracteres que describimos son diagnósticos de clados de tortugas específicos, proporcionando así información filogenéticamente relevante.

6.
J Mol Cell Cardiol ; 60: 151-60, 2013 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-23632046

RESUMEN

Nebulette (NEBL) is a sarcomeric Z-disk protein involved in mechanosensing and force generation via its interaction with actin and tropomyosin-troponin complex. Genetic abnormalities in NEBL lead to dilated cardiomyopathy (DCM) in humans and animal models. The objectives of this study are to determine the earliest preclinical mechanical changes in the myocardium and define underlying molecular mechanisms by which NEBL mutations lead to cardiac dysfunction. We examined cardiac function in 3-month-old non-transgenic (non-Tg) and transgenic (Tg) mice (WT-Tg, G202R-Tg, A592E-Tg) by cardiac magnetic resonance (CMR) imaging. Contractility and calcium transients were measured in isolated cardiomyocytes. A592E-Tg mice exhibited enhanced in vivo twist and untwisting rate compared to control groups. Ex vivo analysis of A592E-Tg cardiomyocytes showed blunted calcium decay response to isoproterenol. CMR imaging of G202R-Tg mice demonstrated reduced torsion compared to non-Tg and WT-Tg, but conserved twist and untwisting rate after correcting for geometric changes. Ex vivo analysis of G202R-Tg cardiomyocytes showed elevated calcium decay at baseline and a conserved contractile response to isoproterenol stress. Protein analysis showed decreased α-actinin and connexin43, and increased cardiac troponin I phosphorylation at baseline in G202R-Tg, providing a molecular mechanism for enhanced ex vivo calcium decay. Ultrastructurally, G202R-Tg cardiomyocytes exhibited increased I-band and sarcomere length, desmosomal separation, and enlarged t-tubules. A592E-Tg cardiomyocytes also showed abnormal ultrastructural changes and desmin downregulation. This study showed distinct effects of NEBL mutations on sarcomere ultrastructure, cellular contractile function, and calcium homeostasis in preclinical DCM in vivo. We suggest that these abnormalities correlate with detectable myocardial wall motion patterns.


Asunto(s)
Señalización del Calcio , Cardiomegalia/metabolismo , Proteínas del Citoesqueleto/metabolismo , Cardiopatías Congénitas/metabolismo , Proteínas con Dominio LIM/metabolismo , Mutación , Miocardio/metabolismo , Miocitos Cardíacos/metabolismo , Actinina/genética , Actinina/metabolismo , Animales , Cardiomegalia/genética , Cardiomegalia/patología , Proteínas del Citoesqueleto/genética , Cardiopatías Congénitas/genética , Cardiopatías Congénitas/patología , Proteínas con Dominio LIM/genética , Ratones , Ratones Transgénicos , Contracción Miocárdica/genética , Miocardio/patología , Miocitos Cardíacos/patología , Sarcómeros/genética , Sarcómeros/metabolismo , Sarcómeros/patología
7.
Ann Oncol ; 24(2): 441-448, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-23041589

RESUMEN

BACKGROUND: Because follicular lymphoma (FL) patients have heterogeneous outcomes, the FL international prognostic index (FLIPI) was developed to risk-stratify patients and to predict survival. However, limited data exist regarding the role of FLIPI in the era of routine first-line rituximab (R) and R-chemotherapy regimens and in the setting of community oncology practices. PATIENTS AND METHODS: We evaluated the outcome data from the National LymphoCare Study (NLCS), a prospective, observational cohort study, which collects data on patients with FL in the United States (US) community practices. RESULTS: Among 1068 male and 1124 female patients with FLIPI data, most were treated in US community practices (79%); 35% were FLIPI good risk, 30% intermediate risk, and 35% poor risk. FLIPI risk groups were significant predictors of overall survival (OS) and progression-free survival (PFS) for patients who undergo watchful waiting (WW), and those who receive non-R-containing regimens, R-alone, and R-chemotherapy combinations. CONCLUSIONS: In the setting of contemporary practice with routine R use, stratifying patients into good, intermediate, and poor FLIPI risk groups predicts distinct outcomes in terms of OS and PFS. FLIPI remains an important prognostic index in the R era and should be used in clinical practices to support discussions about prognosis.


Asunto(s)
Linfoma Folicular/tratamiento farmacológico , Linfoma Folicular/mortalidad , Anciano , Anticuerpos Monoclonales de Origen Murino/uso terapéutico , Estudios de Cohortes , Centros Comunitarios de Salud , Supervivencia sin Enfermedad , Femenino , Humanos , Linfoma Folicular/clasificación , Masculino , Persona de Mediana Edad , Clasificación del Tumor , Estudios Prospectivos , Factores de Riesgo , Rituximab , Resultado del Tratamiento , Espera Vigilante
8.
J Echocardiogr ; 20(1): 24-32, 2022 03.
Artículo en Inglés | MEDLINE | ID: mdl-34415551

RESUMEN

BACKGROUND: Right ventricular function and afterload are associated with clinical outcomes in pulmonary hypertension (PH). MRI-derived interventricular septal curvature has been associated with invasive hemodynamics in PH patients. This study sought to determine the relationship of echocardiography derived septal curvature with invasive hemodynamics in pediatric PH patients. METHODS: A single center chart review identified 56 pediatric patients with PH and 50 control patients with adequate echocardiography to assess septal curvature within one month of initial cardiac catheterization. Echocardiographic indices of septal flattening including end-systolic eccentricity index (EIs), maximum EI (EImax), minimum septal curvature (SCmin), and average SC (SCavg) were determined. RESULTS: PH patients had a median right ventricular systolic pressure of 64 mmHg (interquartile range (IQR) 48-81), mean pulmonary artery pressure of 44 mmHg (IQR 32-57), pulmonary vascular resistance of 7.9 iWU (IQR 4.8-12.9), and pulmonary capillary wedge pressure of 10 mmHg (IQR 8-12). Patients with PH had higher EIs and EImax and lower SCmin and SCavg compared to control patients. SCavg demonstrated the strongest association with right ventricular systolic pressure (R2 0.73, p < 0.0001), mean pulmonary artery pressure (R2 0.63, p < 0.0001), and pulmonary vascular resistance (R2 0.47, p < 0.0001). All septal curvature indices were associated with the composite adverse outcome, including Potts shunt, lung transplantation, and death. SCmin (HR 0.29; 95%CI 0.07-0.97) and SCavg (HR 0.15; 95%CI 0.03-0.72) were the only septal flattening indices associated with death. CONCLUSIONS: Echocardiography derived septal curvature is a non-invasive marker of ventricular afterload and adverse outcomes.


Asunto(s)
Hipertensión Pulmonar , Tabique Interventricular , Cateterismo Cardíaco , Niño , Ecocardiografía , Hemodinámica , Humanos , Hipertensión Pulmonar/complicaciones , Función Ventricular Derecha
9.
J Fish Biol ; 78(4): 1183-99, 2011 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-21463314

RESUMEN

Dietary analysis revealed that an impoundment population of Australian bass Macquaria novemaculeata holds a generalist niche, but one arising from persistent individual specialization and interindividual variation. This 'individual specialist' strategy appeared adaptive, but the strength of individual specialization was largely independent of variation in diet composition, except during blooms of Daphnia sp. Diet composition and dietary overlap showed only moderate ontogenetic variation, and niche breadth showed no relationship with ontogeny. Macquaria novemaculeata showed an asymmetric predator and prey size distribution, consistent with many aquatic predators, with positive relationships between fish size and average, maximum and minimum prey size. There was no asymmetry in the relative size-based niche breadths of individuals, however, which indicates that the niche is a fixed 'window' of relative prey sizes. The difference in the dietary niche and prey-size relationships of M. novemaculeata at the population and individual levels highlights the necessity of assessing the niche at both these levels.


Asunto(s)
Dieta , Perciformes/fisiología , Animales , Australia , Tamaño Corporal , Contenido Digestivo , Análisis de los Mínimos Cuadrados , Conducta Predatoria
10.
Mar Environ Res ; 153: 104813, 2020 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-31623860

RESUMEN

Subsea pipelines have been installed in all major hydrocarbon basins across the globe to support the offshore Oil & Gas (O&G) industry. These artificial structures provide hard substratum that can be colonised and utilised by sessile and mobile organisms. The present study utilises industry-collected remotely operated vehicle (ROV) video to assess fish species richness and abundance, and marine growth type, extent and complexity along sections of a subsea gas pipeline, in 56-82 m depth, that traverses the Australian Commonwealth Montebello Marine Park (MMP). A total of 7493 fish from 81 species and 33 families were recorded from 606 analysed 10 m transects spaced across sections of the pipeline. Of these 81 species, 27 are considered fishery-target species in the Pilbara Demersal Scalefish fishery (PDSF), with select commercial fishing activities permitted with authorisation within the Marine Park. A moderate abundance (175) of sub-adult red emperor (Lutjanus sebae), a fishery-indicator species, were observed along the pipeline. Eleven different categories of marine growth habitat were observed, with the pipeline possessing quite uniform coverage of encrusting marine growth (coralline algae, bryozoans, ascidians, etc.) with patchy occurrences of more structurally complex sponges and black/octocoral forms. Fish species richness and abundance of the commercially targeted Moses' snapper (Lutjanus russellii) were correlated positively with increasing cover of sponges. The pipeline itself had very few spans and was never more than fractionally buried. Despite the somewhat homogenous habitats, depths, and position of the pipeline relative to the seafloor, presence of a field joint indent had a positive influence on the abundance of some common and commercially important fish species. This study demonstrates the ecological value of ROV footage obtained during industry inspection operations that were conducted for reasons unrelated to the determination of ecological information. The pipeline offers a corridor of hard bottom habitat within a marine park that facilitates epibiotic growth and the presence of reef-associated species in a region characterised by sandy sediments. Results indicate the potential importance of subsea O&G infrastructure as a habitat for fish, and in consequence, potentially also as structures with value to fisheries.

11.
AJNR Am J Neuroradiol ; 41(9): 1718-1725, 2020 09.
Artículo en Inglés | MEDLINE | ID: mdl-32816765

RESUMEN

BACKGROUND AND PURPOSE: Posterior fossa tumors are the most common pediatric brain tumors. MR imaging is key to tumor detection, diagnosis, and therapy guidance. We sought to develop an MR imaging-based deep learning model for posterior fossa tumor detection and tumor pathology classification. MATERIALS AND METHODS: The study cohort comprised 617 children (median age, 92 months; 56% males) from 5 pediatric institutions with posterior fossa tumors: diffuse midline glioma of the pons (n = 122), medulloblastoma (n = 272), pilocytic astrocytoma (n = 135), and ependymoma (n = 88). There were 199 controls. Tumor histology served as ground truth except for diffuse midline glioma of the pons, which was primarily diagnosed by MR imaging. A modified ResNeXt-50-32x4d architecture served as the backbone for a multitask classifier model, using T2-weighted MRIs as input to detect the presence of tumor and predict tumor class. Deep learning model performance was compared against that of 4 radiologists. RESULTS: Model tumor detection accuracy exceeded an AUROC of 0.99 and was similar to that of 4 radiologists. Model tumor classification accuracy was 92% with an F1 score of 0.80. The model was most accurate at predicting diffuse midline glioma of the pons, followed by pilocytic astrocytoma and medulloblastoma. Ependymoma prediction was the least accurate. Tumor type classification accuracy and F1 score were higher than those of 2 of the 4 radiologists. CONCLUSIONS: We present a multi-institutional deep learning model for pediatric posterior fossa tumor detection and classification with the potential to augment and improve the accuracy of radiologic diagnosis.


Asunto(s)
Aprendizaje Profundo , Interpretación de Imagen Asistida por Computador/métodos , Neoplasias Infratentoriales/clasificación , Neoplasias Infratentoriales/diagnóstico por imagen , Adolescente , Adulto , Niño , Preescolar , Femenino , Humanos , Lactante , Neoplasias Infratentoriales/patología , Imagen por Resonancia Magnética/métodos , Masculino , Adulto Joven
12.
Science ; 290(5492): 767-73, 2000 Oct 27.
Artículo en Inglés | MEDLINE | ID: mdl-11052933

RESUMEN

Lentiviral delivery of glial cell line-derived neurotrophic factor (lenti-GDNF) was tested for its trophic effects upon degenerating nigrostriatal neurons in nonhuman primate models of Parkinson's disease (PD). We injected lenti-GDNF into the striatum and substantia nigra of nonlesioned aged rhesus monkeys or young adult rhesus monkeys treated 1 week prior with 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP). Extensive GDNF expression with anterograde and retrograde transport was seen in all animals. In aged monkeys, lenti-GDNF augmented dopaminergic function. In MPTP-treated monkeys, lenti-GDNF reversed functional deficits and completely prevented nigrostriatal degeneration. Additionally, lenti-GDNF injections to intact rhesus monkeys revealed long-term gene expression (8 months). In MPTP-treated monkeys, lenti-GDNF treatment reversed motor deficits in a hand-reach task. These data indicate that GDNF delivery using a lentiviral vector system can prevent nigrostriatal degeneration and induce regeneration in primate models of PD and might be a viable therapeutic strategy for PD patients.


Asunto(s)
Dihidroxifenilalanina/análogos & derivados , Dopamina/metabolismo , Terapia Genética , Degeneración Nerviosa/prevención & control , Factores de Crecimiento Nervioso , Proteínas del Tejido Nervioso/genética , Enfermedad de Parkinson/terapia , 1-Metil-4-fenil-1,2,3,6-Tetrahidropiridina , Envejecimiento , Animales , Antígenos CD/análisis , Dihidroxifenilalanina/metabolismo , Modelos Animales de Enfermedad , Femenino , Expresión Génica , Vectores Genéticos , Factor Neurotrófico Derivado de la Línea Celular Glial , Lentivirus/genética , Macaca mulatta , Neostriado/metabolismo , Neostriado/patología , Proteínas del Tejido Nervioso/metabolismo , Proteínas del Tejido Nervioso/uso terapéutico , Neuronas/enzimología , Enfermedad de Parkinson/metabolismo , Enfermedad de Parkinson/patología , Enfermedad de Parkinson/fisiopatología , Trastornos Parkinsonianos/metabolismo , Trastornos Parkinsonianos/patología , Trastornos Parkinsonianos/fisiopatología , Trastornos Parkinsonianos/terapia , Desempeño Psicomotor , Sustancia Negra/metabolismo , Sustancia Negra/patología , Tirosina 3-Monooxigenasa/metabolismo
13.
J Fish Biol ; 74(7): 1525-31, 2009 May.
Artículo en Inglés | MEDLINE | ID: mdl-20735651

RESUMEN

Behaviour of juvenile mulloway Argyrosomus japonicus were investigated under laboratory conditions to determine the efficacy of estimating predation mortality using tethering. The occurrence and duration of stressed behaviour was evaluated for individual A. japonicus that were hooked but untethered, hooked and tethered and unhooked and untethered (free swimming), both in schools and in isolation. Tethered and hooked treatments showed a significantly higher incidence and duration of stressed behaviour over controls, but stressed behaviour was lower for hooked but untethered fish in the presence of a school. Artifacts associated with elevated stress may reduce the reliability of estimates of relative predation derived from tethering data for schooling fishes.


Asunto(s)
Conducta Animal , Perciformes/fisiología , Estrés Fisiológico , Animales , Restricción Física
14.
AJNR Am J Neuroradiol ; 40(1): 154-161, 2019 01.
Artículo en Inglés | MEDLINE | ID: mdl-30523141

RESUMEN

BACKGROUND AND PURPOSE: Distinct molecular subgroups of pediatric medulloblastoma confer important differences in prognosis and therapy. Currently, tissue sampling is the only method to obtain information for classification. Our goal was to develop and validate radiomic and machine learning approaches for predicting molecular subgroups of pediatric medulloblastoma. MATERIALS AND METHODS: In this multi-institutional retrospective study, we evaluated MR imaging datasets of 109 pediatric patients with medulloblastoma from 3 children's hospitals from January 2001 to January 2014. A computational framework was developed to extract MR imaging-based radiomic features from tumor segmentations, and we tested 2 predictive models: a double 10-fold cross-validation using a combined dataset consisting of all 3 patient cohorts and a 3-dataset cross-validation, in which training was performed on 2 cohorts and testing was performed on the third independent cohort. We used the Wilcoxon rank sum test for feature selection with assessment of area under the receiver operating characteristic curve to evaluate model performance. RESULTS: Of 590 MR imaging-derived radiomic features, including intensity-based histograms, tumor edge-sharpness, Gabor features, and local area integral invariant features, extracted from imaging-derived tumor segmentations, tumor edge-sharpness was most useful for predicting sonic hedgehog and group 4 tumors. Receiver operating characteristic analysis revealed superior performance of the double 10-fold cross-validation model for predicting sonic hedgehog, group 3, and group 4 tumors when using combined T1- and T2-weighted images (area under the curve = 0.79, 0.70, and 0.83, respectively). With the independent 3-dataset cross-validation strategy, select radiomic features were predictive of sonic hedgehog (area under the curve = 0.70-0.73) and group 4 (area under the curve = 0.76-0.80) medulloblastoma. CONCLUSIONS: This study provides proof-of-concept results for the application of radiomic and machine learning approaches to a multi-institutional dataset for the prediction of medulloblastoma subgroups.


Asunto(s)
Neoplasias Cerebelosas/diagnóstico por imagen , Imagen por Resonancia Magnética/métodos , Meduloblastoma/diagnóstico por imagen , Adolescente , Neoplasias Cerebelosas/metabolismo , Niño , Preescolar , Estudios de Cohortes , Bases de Datos Factuales , Femenino , Proteínas Hedgehog/metabolismo , Humanos , Procesamiento de Imagen Asistido por Computador , Aprendizaje Automático , Masculino , Meduloblastoma/metabolismo , Valor Predictivo de las Pruebas , Pronóstico , Reproducibilidad de los Resultados , Estudios Retrospectivos
15.
Methods Mol Biol ; 1799: 11-26, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-29956140

RESUMEN

Helminth parasites infect over 2 billion people worldwide resulting in huge global health and economic burden. Helminths typically stimulate Type 2 immune responses and excel at manipulating or suppressing host-immune responses resulting in chronic infections that can last for years to decades. Alongside the importance for the development of helminth treatments and vaccines, studying helminth immunity has unraveled many fundamental aspects of Type 2 immunity and immune regulation with implications for the treatment of autoimmunity and Type 2-mediated diseases, such as allergies. Here we describe the maintenance and use of Litomosoides sigmodontis, a murine model for studying host-parasite interactions, Type 2 immunity, and vaccines to tissue-dwelling filarial nematodes, which in humans cause lymphatic filariasis (e.g., Brugia malayi) and onchocerciasis (Onchocerca volvulus).


Asunto(s)
Filariasis/inmunología , Filariasis/parasitología , Filarioidea , Interacciones Huésped-Parásitos/inmunología , Inmunidad , Animales , Antígenos Helmínticos/inmunología , Modelos Animales de Enfermedad , Femenino , Ratones , Ácaros/parasitología
16.
AJNR Am J Neuroradiol ; 39(5): 949-955, 2018 05.
Artículo en Inglés | MEDLINE | ID: mdl-29545246

RESUMEN

BACKGROUND AND PURPOSE: Molecular grouping of medulloblastoma correlates with prognosis and supports the therapeutic strategy. We provide our experience with the imaging features of primary and metastatic disease in relation to the molecular groups. MATERIALS AND METHODS: One hundred nineteen consecutive patients (mean age, 7.3 ± 3.8 years at diagnosis; male, 79 [66.4%]) with a confirmed diagnosis of medulloblastoma and interpretable pretreatment MRIs were retrieved from our data base from January 2000 to December 2016. Each patient was assigned to wingless, sonic hedgehog, group 3, or group 4 molecular groups. Then, we determined the imaging features of both primary and metastatic/recurrent disease predictive of molecular groups. RESULTS: In addition to recently reported predictors based on primary tumor, including cerebellar peripheral location for sonic hedgehog (adjusted odds ratio = 9, P < .0001), minimal enhancement of primary group 4 tumor (adjusted odds ratio = 5.2, P < .0001), and cerebellopontine angle location for wingless (adjusted odds ratio = 1.4, P = .03), ependymal metastasis with diffusion restriction and minimal postcontrast enhancement ("mismatching pattern") (adjusted odds ratio = 2.8, P = .001) for group 4 and spinal metastasis for group 3 (adjusted odds ratio = 1.9, P = .01) also emerged as independent predictors of medulloblastoma molecular groups. Specifically, the presence of a metastasis in the third ventricular infundibular recess showing a mismatching pattern was significantly associated with group 4 (P = .02). CONCLUSIONS: In addition to imaging features of primary tumors, some imaging patterns of metastatic dissemination in medulloblastoma seem characteristic, perhaps even specific to certain groups. This finding could further help in differentiating molecular groups, specifically groups 3 and 4, when the characteristics of the primary tumor overlap.


Asunto(s)
Neoplasias Cerebelosas/diagnóstico por imagen , Imagen por Resonancia Magnética/métodos , Meduloblastoma/diagnóstico por imagen , Adolescente , Neoplasias Cerebelosas/genética , Neoplasias Cerebelosas/patología , Niño , Preescolar , Femenino , Humanos , Masculino , Meduloblastoma/genética , Meduloblastoma/patología , Pronóstico
17.
Mar Environ Res ; 141: 53-65, 2018 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-30107887

RESUMEN

Information on the potential ecological value of offshore oil and gas infrastructure is required as it reaches the end of its operational life and decisions must be made regarding the best practice option for decommissioning. This study uses baited remote underwater stereo-video systems to assess fish assemblages along an offshore subsea pipeline and in adjacent natural seabed habitats at ∼140 m depth on the North West Shelf of Western Australia. A total of 955 fish from 40 species and 25 families were recorded. Species richness was, on average 25% higher on the pipeline (6.48 ±â€¯0.37 SE) than off (4.81 ±â€¯0.28 SE) while relative abundance of fish was nearly double on the pipeline (20.38 ±â€¯2.81 SE) than in adjacent natural habitats (10.97 ±â€¯1.02 SE). The pipeline was characterised by large, commercially important species known to associate with complex epibenthic habitat and, as such, possessed a biomass of commercial fish ca 7.5 × higher and catch value ca. 8.6 × ($65.11 ±â€¯$11.14 SE) than in adjacent natural habitats ($7.57 ±â€¯$2.41 SE). This study has added to the knowledge of fish assemblage associations with subsea infrastructure and provides a greater understanding of the ecological and fisheries implications of decommissioning, helping to better inform decision-making on the fate of infrastructure.


Asunto(s)
Explotaciones Pesqueras , Peces , Yacimiento de Petróleo y Gas , Animales , Ecosistema , Biología Marina , Australia Occidental
18.
Oncogene ; 36(43): 5969-5984, 2017 10 26.
Artículo en Inglés | MEDLINE | ID: mdl-28650469

RESUMEN

Sonic Hedgehog (SHH) signaling at primary cilia drives the proliferation and progression of a subset of medulloblastomas, the most common malignant paediatric brain tumor. Severe side effects associated with conventional treatments and resistance to targeted therapies has led to the need for new strategies. SHH signaling is dependent on primary cilia for signal transduction suggesting the potential for cilia destabilizing mechanisms as a therapeutic target. INPP5E is an inositol polyphosphate 5-phosphatase that hydrolyses PtdIns(4,5)P2 and more potently, the phosphoinositide (PI) 3-kinase product PtdIns(3,4,5)P3. INPP5E promotes SHH signaling during embryonic development via PtdIns(4,5)P2 hydrolysis at cilia, that in turn regulates the cilia recruitment of the SHH suppressor GPR161. However, the role INPP5E plays in cancer is unknown and the contribution of PI3-kinase signaling to cilia function is little characterized. Here, we reveal INPP5E promotes SHH signaling in SHH medulloblastoma by negatively regulating a cilia-compartmentalized PI3-kinase signaling axis that maintains primary cilia on tumor cells. Conditional deletion of Inpp5e in a murine model of constitutively active Smoothened-driven medulloblastoma slowed tumor progression, suppressed cell proliferation, reduced SHH signaling and promoted tumor cell cilia loss. PtdIns(3,4,5)P3, its effector pAKT and the target pGSK3ß, which when non-phosphorylated promotes cilia assembly/stability, localized to tumor cell cilia. The number of PtdIns(3,4,5)P3/pAKT/pGSK3ß-positive cilia was increased in cultured Inpp5e-null tumor cells relative to controls. PI3-kinase inhibition or expression of wild-type, but not catalytically inactive HA-INPP5E partially rescued cilia loss in Inpp5e-null tumor cells in vitro. INPP5E mRNA and copy number were reduced in human SHH medulloblastoma compared to other molecular subtypes and consistent with the murine model, reduced INPP5E was associated with improved overall survival. Therefore our study identifies a compartmentalized PtdIns(3,4,5)P3/AKT/GSK3ß signaling axis at cilia in SHH-dependent medulloblastoma that is regulated by INPP5E to maintain tumor cell cilia, promote SHH signaling and thereby medulloblastoma progression.


Asunto(s)
Neoplasias Encefálicas/genética , Glucógeno Sintasa Quinasa 3 beta/genética , Proteínas Hedgehog/genética , Meduloblastoma/genética , Monoéster Fosfórico Hidrolasas/genética , Animales , Neoplasias Encefálicas/patología , Línea Celular Tumoral , Proliferación Celular/genética , Cilios/genética , Cilios/patología , Modelos Animales de Enfermedad , Humanos , Meduloblastoma/patología , Ratones , Proteína Oncogénica v-akt/genética , Fosfatidilinositol 3-Quinasas/genética , Fosfatos de Fosfatidilinositol/genética , Fosfatos de Fosfatidilinositol/metabolismo , Receptores Acoplados a Proteínas G/genética , Transducción de Señal
19.
Bone Marrow Transplant ; 52(10): 1443-1447, 2017 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-28714947

RESUMEN

Congestive heart failure and subclinical left ventricular systolic dysfunction (LVSD) affect long-term survivors of hematopoietic stem cell transplant (HSCT). Echocardiographic measurements of global longitudinal and circumferential strain have shown promise in identifying subclinical LVSD in cancer survivors. We analyzed echocardiograms in 95 children and young adults with malignancies or bone marrow failure syndromes performed before HSCT and 1-6 years after HSCT. We additionally measured the biomarkers soluble suppression of tumorigenicity-2 (sST-2) and cardiac troponin-I (cTn-I) in the same children through 49 days post HSCT. Ejection fraction (EF) after HSCT was unchanged from baseline (baseline: z-score -0.73 vs long-term follow up: -0.44, P=0.11). Global longitudinal strain was unchanged from baseline (-20.66 vs -20.74%, P=0.90) as was global circumferential strain (-24.3 vs -23.5%, P=0.32). Levels of sST-2 were elevated at all time points compared with baseline samples and cTn-I was elevated at days 14 and 28. Cardiac biomarkers at any time point did not correlate with long-term follow-up EF. In children and young adult survivors of HSCT, EF was unchanged in the first years after HSCT. Elevation in cardiac biomarkers occurring after HSCT suggest subclinical cardiac injury occurs in many patients and long-term monitoring for LVSD should continue.


Asunto(s)
Insuficiencia Cardíaca , Trasplante de Células Madre Hematopoyéticas , Volumen Sistólico , Sobrevivientes , Disfunción Ventricular Izquierda , Adolescente , Adulto , Anemia Aplásica/sangre , Anemia Aplásica/fisiopatología , Anemia Aplásica/terapia , Enfermedades de la Médula Ósea/sangre , Enfermedades de la Médula Ósea/fisiopatología , Enfermedades de la Médula Ósea/terapia , Trastornos de Fallo de la Médula Ósea , Niño , Preescolar , Femenino , Estudios de Seguimiento , Insuficiencia Cardíaca/sangre , Insuficiencia Cardíaca/fisiopatología , Hemoglobinuria Paroxística/sangre , Hemoglobinuria Paroxística/fisiopatología , Hemoglobinuria Paroxística/terapia , Humanos , Lactante , Proteína 1 Similar al Receptor de Interleucina-1/sangre , Masculino , Neoplasias/sangre , Neoplasias/fisiopatología , Neoplasias/terapia , Troponina I/sangre , Disfunción Ventricular Izquierda/sangre , Disfunción Ventricular Izquierda/fisiopatología , Adulto Joven
20.
Bone Marrow Transplant ; 52(8): 1171-1179, 2017 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-28394368

RESUMEN

We hypothesized that subclinical cardiac injury in the peri-transplant period is more frequent than currently appreciated in children and young adults. We performed echocardiographic screening on 227 consecutive patients prior to hematopoietic stem cell transplantation (HSCT), and 7, 30 and 100 days after transplant. We measured cardiac biomarkers cardiac troponin-I (cTn-I), and soluble suppressor of tumorigenicity 2 (sST2) prior to transplant, during conditioning, and days +7, +14, +28 and +49 in 26 patients. We subsequently analyzed levels of cTn-I every 48-72 h in 15 consecutive children during conditioning. Thirty-two percent (73/227) of patients had a new abnormality on echocardiogram. New left ventricular systolic dysfunction (LVSD) occurred in 6.2% of subjects and new pericardial effusion in 27.3%. Eight of 227 (3.5%) patients underwent pericardial drain placement, and 5 (2.2%) received medical therapy for clinically occult LVSD. cTn-I was elevated in 53.0% of all samples and sST2 in 38.2%. At least one sample had a detectable cTn-I in 84.6% of patients and an elevated sST2 in 76.9%. Thirteen of fifteen patients monitored frequently during condition had elevation of cTn-I. Echocardiographic and biochemical abnormalities are frequent in the peri-HSCT period. Echocardiogram does not detect all subclinical cardiac injuries that may become clinically relevant over longer periods.


Asunto(s)
Lesiones Cardíacas/etiología , Trasplante de Células Madre Hematopoyéticas/efectos adversos , Adolescente , Adulto , Biomarcadores/sangre , Niño , Preescolar , Ecocardiografía , Femenino , Lesiones Cardíacas/diagnóstico , Humanos , Lactante , Proteína 1 Similar al Receptor de Interleucina-1/sangre , Masculino , Derrame Pericárdico/etiología , Factores de Tiempo , Troponina I/sangre , Disfunción Ventricular Izquierda/etiología , Adulto Joven
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