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1.

Genome-wide high-throughput chromosome conformation capture analysis reveals hierarchical chromatin interactions during early somatic embryogenesis.

Chen, Yan; Xie, Dejian; Ma, Xiangwei; Xue, Xiaodong; Liu, Mengyu; Xiao, Xuechen; Lai, Chunwang; Xu, Xiaoping; Chen, Xiaohui; Chen, Yukun; Zhang, Zihao; XuHan, Xu; Lai, Zhongxiong; Lin, Yuling.

Plant Physiol; 193(1): 555-577, 2023 08 31.

Artículo en Inglés | MEDLINE | ID: mdl-37313777

2.

FAIRE-MS reveals mitotic retention of transcriptional regulators on a proteome-wide scale.

Ye, Bingyu; Shen, Wenlong; Li, Yanchang; Wang, Dong; Zhang, Yan; Li, Ping; Yin, Man; Wang, Yahao; Xie, Dejian; Shi, Shu; Yao, Tao; Chen, Juncai; Xu, Ping; Zhao, Zhihu.

FASEB J; 37(2): e22724, 2023 02.

Artículo en Inglés | MEDLINE | ID: mdl-36583687

3.

CSTI-300 (SMP-100); a Novel 5-HT₃ Receptor Partial Agonist with Potential to Treat Patients with Irritable Bowel Syndrome or Carcinoid Syndrome.

Roberts, Alexander; Grafton, Gillian; Powell, Andrew D; Brock, Kristian; Chen, Chunlin; Xie, Dejian; Huang, Jinkun; Liu, Shuang; Cooper, Alison J; Brady, Catherine A; Qureshi, Omar; Stamataki, Zania; Manning, David D; Moore, Nicholas A; Sargent, Bruce J; Guzzo, Peter R; Barnes, Nicholas M.

J Pharmacol Exp Ther; 373(1): 122-134, 2020 04.

Artículo en Inglés | MEDLINE | ID: mdl-32102919

4.

Genome-wide Hi-C analysis reveals extensive hierarchical chromatin interactions in rice.

Dong, Qianli; Li, Ning; Li, Xiaochong; Yuan, Zan; Xie, Dejian; Wang, Xiaofei; Li, Jianing; Yu, Yanan; Wang, Jinbin; Ding, Baoxu; Zhang, Zhibin; Li, Changping; Bian, Yao; Zhang, Ai; Wu, Ying; Liu, Bao; Gong, Lei.

Plant J; 94(6): 1141-1156, 2018 06.

Artículo en Inglés | MEDLINE | ID: mdl-29660196

5.

Optimization and quality control of genome-wide Hi-C library preparation.

Zhang, Xiang-Yuan; He, Chao; Ye, Bing-Yu; Xie, De-Jian; Shi, Ming-Lei; Zhang, Yan; Shen, Wen-Long; Li, Ping; Zhao, Zhi-Hu.

Yi Chuan; 39(9): 847-855, 2017 Sep 20.

Artículo en Inglés | MEDLINE | ID: mdl-28936982

6.

Construction of CTCF degradation cell line by CRISPR/Cas9 mediated genome editing.

Xie, De-jian; Shi, Ming-lei; Zhang, Yan; Wang, Tian-yi; Shen, Wen-long; Ye, Bing-yu; Li, Ping; He, Chao; Zhang, Xiang-yuan; Zhao, Zhi-hu.

Yi Chuan; 38(7): 651-657, 2016 07 20.

Artículo en Inglés | MEDLINE | ID: mdl-27733338

7.

Structural basis for partial agonism in 5-HT_3A receptors.

Felt, Kevin; Stauffer, Madeleine; Salas-Estrada, Leslie; Guzzo, Peter R; Xie, Dejian; Huang, Jinkun; Filizola, Marta; Chakrapani, Sudha.

Nat Struct Mol Biol; 31(4): 598-609, 2024 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-38177669

8.

Glucocorticoid receptor-mediated Nr1d1 chromatin circadian misalignment in stress-induced irritable bowel syndrome.

Zheng, Gen; Pang, Suya; Wang, Junbao; Wang, Fangyu; Wang, Qi; Yang, Lili; Ji, Mengdie; Xie, Dejian; Zhu, Shengtao; Chen, Yang; Zhou, Yan; Higgins, Gerald A; Wiley, John W; Hou, Xiaohua; Lin, Rong.

iScience; 26(7): 107137, 2023 Jul 21.

Artículo en Inglés | MEDLINE | ID: mdl-37404374

9.

In vivo structure and dynamics of the SARS-CoV-2 RNA genome.

Zhang, Yan; Huang, Kun; Xie, Dejian; Lau, Jian You; Shen, Wenlong; Li, Ping; Wang, Dong; Zou, Zhong; Shi, Shu; Ren, Hongguang; Wang, Youliang; Mao, Youzhi; Jin, Meilin; Kudla, Grzegorz; Zhao, Zhihu.

Nat Commun; 12(1): 5695, 2021 09 28.

Artículo en Inglés | MEDLINE | ID: mdl-34584097

10.

Synthesis and SAR of vinca alkaloid analogues.

Voss, Matthew E; Ralph, Jeffery M; Xie, Dejian; Manning, David D; Chen, Xinchao; Frank, Anthony J; Leyhane, Andrew J; Liu, Lei; Stevens, Jason M; Budde, Cheryl; Surman, Matthew D; Friedrich, Thomas; Peace, Denise; Scott, Ian L; Wolf, Mark; Johnson, Randall.

Bioorg Med Chem Lett; 19(4): 1245-9, 2009 Feb 15.

Artículo en Inglés | MEDLINE | ID: mdl-19147348

11.

Author Correction: Structural basis for partial agonism in 5-HT_3A receptors.

Felt, Kevin; Stauffer, Madeleine; Salas-Estrada, Leslie; Guzzo, Peter R; Xie, Dejian; Huang, Jinkun; Filizola, Marta; Chakrapani, Sudha.

Nat Struct Mol Biol; 31(4): 728, 2024 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-38580848

12.

Coordinated regulation of IFITM1, 2 and 3 genes by an IFN-responsive enhancer through long-range chromatin interactions.

Li, Ping; Shi, Ming-Lei; Shen, Wen-Long; Zhang, Zhang; Xie, De-Jian; Zhang, Xiang-Yuan; He, Chao; Zhang, Yan; Zhao, Zhi-Hu.

Biochim Biophys Acta Gene Regul Mech; 1860(8): 885-893, 2017 Aug.

Artículo en Inglés | MEDLINE | ID: mdl-28511927

13.

Calixarene Anhydrides as Useful Synthetic Intermediates(1).

Xie, Dejian; Gutsche, C. David.

J Org Chem; 62(7): 2280-2284, 1997 Apr 04.

Artículo en Inglés | MEDLINE | ID: mdl-11671544

14.

Synthesis of phosphine containing amino acids: utilization of peptide synthesis in ligand design.

Agarkov, Anton; Greenfield, Scott; Xie, Dejian; Pawlick, Robert; Starkey, Gale; Gilbertson, Scott R.

Biopolymers; 84(1): 48-73, 2006.

Artículo en Inglés | MEDLINE | ID: mdl-16235230

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