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1.
Appl Environ Microbiol ; 80(1): 385-91, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-24185851

RESUMEN

Some Arcobacter species are considered emerging food-borne and waterborne pathogens, and shellfish have been suggested as one of their reservoirs. However, only a few studies have investigated the presence of Arcobacter in this kind of food. This study assesses the prevalence and diversity of Arcobacter spp. in shellfish by multiplex PCR (m-PCR) and culturing methods (under different atmospheric conditions) and evaluates the possible influence of environmental parameters (temperature, salinity, and harvesting bay). Arcobacter was detected by m-PCR and/or culturing in 61 (29.9%) of 204 shellfish samples. Of the positive samples by culturing, 41.1% were obtained under only aerobic incubation conditions, while 23.2% were obtained under only microaerobic conditions. Of 476 investigated isolates, 118 belonged to different enterobacterial repetitive intergenic consensus (ERIC)-PCR genotypes (strains) and to 11 different species. This study shows the highest diversity of Arcobacter species ever observed in samples from any origin. The most prevalent species was Arcobacter butzleri (60.2%), followed by Arcobacter molluscorum (21.2%). The prevalence of Arcobacter was significantly higher during the summer than in other seasons, being associated with an increase in water temperature. Results confirm that shellfish are a reservoir for a remarkable diversity of Arcobacter spp.


Asunto(s)
Arcobacter/aislamiento & purificación , Técnicas Bacteriológicas/métodos , Biodiversidad , Mariscos/microbiología , Manejo de Especímenes/métodos , Aerobiosis , Arcobacter/clasificación , Arcobacter/genética , Arcobacter/crecimiento & desarrollo , Reacción en Cadena de la Polimerasa Multiplex , Temperatura
2.
Syst Appl Microbiol ; 35(3): 133-8, 2012 May.
Artículo en Inglés | MEDLINE | ID: mdl-22401779

RESUMEN

A group of ten Arcobacter isolates (Gram negative, slightly curved motile rods, oxidase positive) was recovered from mussels (nine) and from clams (one). These isolates could not be assigned to any known species using the molecular identification methods specific for this genus (16S rDNA-RFLP and m-PCR). The aim of this study is to establish the taxonomic position of these isolates. The 16S rRNA gene sequence similarity of mussel strain F4(T) to the type strains of all other Arcobacter species ranged from 91.1% to 94.8%. The species most similar to the clams' strain F67-11(T) were Arcobacter defluvii (CECT 7697(T), 97.1%) and Arcobacter ellisii (CECT 7837(T), 97.0%). On the basis of phylogenetic analyses with 16S rRNA, rpoB, gyrB and hsp60 genes, the mussel and clam strains formed two different, new lineages within the genus Arcobacter. These data, together with their different phenotypic characteristics and MALDI-TOF mass spectra, revealed that these strains represent two new species, for which the names Arcobacter bivalviorum (type strain F4(T)=CECT 7835(T)=LMG 26154(T)) and Arcobacter venerupis (type strain F67-11(T)=CECT 7836(T)=LMG 26156(T)) are proposed.


Asunto(s)
Arcobacter/clasificación , Arcobacter/aislamiento & purificación , Mariscos/microbiología , Arcobacter/química , Arcobacter/genética , Chaperonina 60/genética , Análisis por Conglomerados , Girasa de ADN/genética , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Ribosómico/química , ADN Ribosómico/genética , ARN Polimerasas Dirigidas por ADN/genética , Datos de Secuencia Molecular , Filogenia , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
3.
Syst Appl Microbiol ; 34(6): 414-8, 2011 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-21723060

RESUMEN

As part of a study carried out for detecting Arcobacter spp. in shellfish, three mussel isolates that were Gram-negative slightly curved rods, non-spore forming, showed a new 16S rDNA-RFLP pattern with a specific identification method for the species of this genus. Sequences of the 16S rRNA gene and those of the housekeeping genes rpoB, gyrB and hsp60 provided evidence that these mussel strains belonged to an unknown genetic lineage within the genus Arcobacter. The similarity between the 16S rRNA gene sequence of the representative strain (F79-6(T)) and type strains of the other Arcobacter species ranged between 94.1% with A. halophilus and 99.1% with the recently proposed species A. defluvii (CECT 7697(T)). DDH results between strain F79-6(T) and the type strain of the latter species were below 70% (53±3.0%). Phenotypic characteristics together with MALDITOF mass spectra differentiated the new mussel strains from all other Arcobacter species. All the results indicate that these strains represent a new species, for which the name Arcobacter ellisii sp. nov. with the type strain F79-6(T) (=CECT 7837(T)=LMG 26155(T)) is proposed.


Asunto(s)
Arcobacter/clasificación , Bivalvos/microbiología , Animales , Arcobacter/genética , Arcobacter/aislamiento & purificación , ADN Bacteriano/genética , ADN Ribosómico/genética , Genes Bacterianos , Datos de Secuencia Molecular , Filogenia , Análisis de Secuencia de ADN , España
4.
Syst Appl Microbiol ; 34(2): 105-9, 2011 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-21185143

RESUMEN

Nineteen bacteria isolates recovered from shellfish samples (mussels and oysters) showed a new and specific 16S rDNA-RFLP pattern with an Arcobacter identification method designed to recognize all species described up to 2008. These results suggested that they could belong to a new species. ERIC-PCR revealed that the 19 isolates belonged to 3 different strains. The sequence of the 16S rRNA gene of a representative strain (F98-3(T)) showed 97.6% similarity with the closest species Arcobacter marinus followed by Arcobacter halophilus (95.6%) and Arcobacter mytili (94.7%). The phylogenetic analysis with the16S rRNA, rpoB, gyrB and hsp60 genes placed the shellfish strains within the same cluster as the three species mentioned (also isolated from saline habitats) but they formed an independent phylogenetic line. The DDH results between strain F98-3(T) and A. marinus (54.8%±1.05), confirmed that it represents a new species. Several biochemical tests differentiated the shellfish isolates from all other Arcobacter species. Although the new species was different from A. mytili, they shared not only the same habitat (mussels) but also the characteristic of being so far the only Arcobacter species that are simultaneously negative for urea and indoxyl acetate hydrolysis. All results supported the classification of the shellfish strains as a new species, for which the name Arcobacter molluscorum sp. nov. with the type strain F98-3(T) is proposed (=CECT 7696(T)=LMG 25693(T)).


Asunto(s)
Arcobacter/aislamiento & purificación , Bivalvos/microbiología , Ostreidae/microbiología , Animales , Antibacterianos/farmacología , Arcobacter/clasificación , Arcobacter/enzimología , Catalasa/metabolismo , Cefoperazona/farmacología , Farmacorresistencia Bacteriana , Datos de Secuencia Molecular , Filogenia , Polimorfismo de Longitud del Fragmento de Restricción , ARN Bacteriano/genética , ARN Ribosómico 16S/genética , Ureasa/metabolismo
5.
Antimicrob Agents Chemother ; 49(8): 3498-500, 2005 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-16048969

RESUMEN

The in vitro interaction between amphotericin B and micafungin against 36 isolates of Scedosporium spp. has been evaluated using checkerboard assays and the minimal effective concentration endpoint. Synergy was found for 82.4% of Scedosporium prolificans isolates and for 31.6% of Scedosporium apiospermum isolates. Antagonism was not observed.


Asunto(s)
Anfotericina B/farmacología , Antifúngicos/farmacología , Lipoproteínas/farmacología , Péptidos Cíclicos/farmacología , Scedosporium/efectos de los fármacos , Sinergismo Farmacológico , Equinocandinas , Humanos , Lipopéptidos , Micafungina , Pruebas de Sensibilidad Microbiana/métodos , Pruebas de Sensibilidad Microbiana/normas , Scedosporium/clasificación
6.
Antimicrob Agents Chemother ; 48(7): 2727-9, 2004 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-15215136

RESUMEN

We have evaluated the in vitro activity of 15 combinations of antifungal drugs (amphotericin B, itraconazole, voriconazole, albaconazole, ravuconazole, terbinafine, and micafungin) against four isolates of Paecilomyces variotii and three of P. lilacinus. The interaction of terbinafine with the four azoles was synergistic for 53% of the combinations, while the interactions of both amphotericin B and micafungin with the rest of antifungal agents were mainly indifferent.


Asunto(s)
Antifúngicos/farmacología , Paecilomyces/efectos de los fármacos , Interacciones Farmacológicas , Humanos , Micosis/tratamiento farmacológico , Micosis/microbiología , Naftalenos/farmacología , Terbinafina
7.
Antimicrob Agents Chemother ; 47(6): 1948-51, 2003 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-12760872

RESUMEN

There are no effective therapeutics for treating invasive Scedosporium prolificans infections. Doses of 15, 25, and 50 mg/kg of body weight/day for the new triazole albaconazole (ABC) were evaluated in an immunocompetent rabbit model of systemic infection with this mold. Treatments were begun 1 day after challenge and given for 10 days. ABC at any dose was more effective than amphotericin B (AMB) at 0.8 mg/kg/day at clearing S. prolificans from tissue (P < 0.007). The percentages of survival at 25 mg of ABC/kg/day were similar to those obtained with AMB. Rabbits showed 100% survival when they were treated with 50 mg of ABC per kg (P < 0.0001 versus control group), and only this dosage was able to reduce tissue burden significantly in the five organs studied, i.e., spleen, kidneys, liver, lungs, and brain.


Asunto(s)
Antifúngicos/farmacología , Micetoma/tratamiento farmacológico , Quinazolinas/farmacología , Scedosporium/crecimiento & desarrollo , Triazoles/farmacología , Animales , Masculino , Micetoma/microbiología , Conejos , Scedosporium/metabolismo , Análisis de Supervivencia
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