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1.

Absence of adaptive evolution is the main barrier against influenza emergence in horses in Asia despite frequent virus interspecies transmission from wild birds.

Zhu, Henan; Damdinjav, Batchuluun; Gonzalez, Gaelle; Patrono, Livia Victoria; Ramirez-Mendoza, Humberto; Amat, Julien A R; Crispell, Joanna; Parr, Yasmin Amy; Hammond, Toni-Ann; Shiilegdamba, Enkhtuvshin; Leung, Y H Connie; Peiris, Malik; Marshall, John F; Hughes, Joseph; Gilbert, Martin; Murcia, Pablo R.

PLoS Pathog; 15(2): e1007531, 2019 02.

Artículo en Inglés | MEDLINE | ID: mdl-30731004

2.

M Segment-Based Minigenomes and Virus-Like Particle Assays as an Approach To Assess the Potential of Tick-Borne Phlebovirus Genome Reassortment.

Rezelj, Veronica V; Mottram, Timothy J; Hughes, Joseph; Elliott, Richard M; Kohl, Alain; Brennan, Benjamin.

J Virol; 93(6)2019 03 15.

Artículo en Inglés | MEDLINE | ID: mdl-30567991

3.

TRIM69 Inhibits Vesicular Stomatitis Indiana Virus.

Rihn, Suzannah J; Aziz, Muhamad Afiq; Stewart, Douglas G; Hughes, Joseph; Turnbull, Matthew L; Varela, Mariana; Sugrue, Elena; Herd, Christie S; Stanifer, Megan; Sinkins, Steven P; Palmarini, Massimo; Wilson, Sam J.

J Virol; 93(20)2019 10 15.

Artículo en Inglés | MEDLINE | ID: mdl-31375575

4.

Highly Diverse Hepatitis C Strains Detected in Sub-Saharan Africa Have Unknown Susceptibility to Direct-Acting Antiviral Treatments.

Davis, Chris; Mgomella, George S; da Silva Filipe, Ana; Frost, Eric H; Giroux, Genevieve; Hughes, Joseph; Hogan, Catherine; Kaleebu, Pontiano; Asiki, Gershim; McLauchlan, John; Niebel, Marc; Ocama, Ponsiano; Pomila, Cristina; Pybus, Oliver G; Pépin, Jacques; Simmonds, Peter; Singer, Joshua B; Sreenu, Vattipally B; Wekesa, Clara; Young, Elizabeth H; Murphy, Donald G; Sandhu, Manj; Thomson, Emma C.

Hepatology; 69(4): 1426-1441, 2019 04.

Artículo en Inglés | MEDLINE | ID: mdl-30387174

5.

Fundamental properties of the mammalian innate immune system revealed by multispecies comparison of type I interferon responses.

Shaw, Andrew E; Hughes, Joseph; Gu, Quan; Behdenna, Abdelkader; Singer, Joshua B; Dennis, Tristan; Orton, Richard J; Varela, Mariana; Gifford, Robert J; Wilson, Sam J; Palmarini, Massimo.

PLoS Biol; 15(12): e2004086, 2017 12.

Artículo en Inglés | MEDLINE | ID: mdl-29253856

6.

Reorganizing the family Parvoviridae: a revised taxonomy independent of the canonical approach based on host association.

Pénzes, Judit J; Söderlund-Venermo, Maria; Canuti, Marta; Eis-Hübinger, Anna Maria; Hughes, Joseph; Cotmore, Susan F; Harrach, Balázs.

Arch Virol; 165(9): 2133-2146, 2020 Sep.

Artículo en Inglés | MEDLINE | ID: mdl-32533329

7.

Interpretation of peripheral arterial and venous Doppler waveforms: A consensus statement from the Society for Vascular Medicine and Society for Vascular Ultrasound.

Kim, Esther Sh; Sharma, Aditya M; Scissons, Robert; Dawson, David; Eberhardt, Robert T; Gerhard-Herman, Marie; Hughes, Joseph P; Knight, Steve; Marie Kupinski, Ann; Mahe, Guillaume; Neumyer, Marsha; Poe, Patricia; Shugart, Rita; Wennberg, Paul; Williams, David M; Zierler, R Eugene.

Vasc Med; 25(5): 484-506, 2020 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-32667274

8.

Human Cytomegalovirus Genomes Sequenced Directly From Clinical Material: Variation, Multiple-Strain Infection, Recombination, and Gene Loss.

Suárez, Nicolás M; Wilkie, Gavin S; Hage, Elias; Camiolo, Salvatore; Holton, Marylouisa; Hughes, Joseph; Maabar, Maha; Vattipally, Sreenu B; Dhingra, Akshay; Gompels, Ursula A; Wilkinson, Gavin W G; Baldanti, Fausto; Furione, Milena; Lilleri, Daniele; Arossa, Alessia; Ganzenmueller, Tina; Gerna, Giuseppe; Hubácek, Petr; Schulz, Thomas F; Wolf, Dana; Zavattoni, Maurizio; Davison, Andrew J.

J Infect Dis; 220(5): 781-791, 2019 07 31.

Artículo en Inglés | MEDLINE | ID: mdl-31050742

9.

ICTV Virus Taxonomy Profile: Parvoviridae.

Cotmore, Susan F; Agbandje-McKenna, Mavis; Canuti, Marta; Chiorini, John A; Eis-Hubinger, Anna-Maria; Hughes, Joseph; Mietzsch, Mario; Modha, Sejal; Ogliastro, Mylène; Pénzes, Judit J; Pintel, David J; Qiu, Jianming; Soderlund-Venermo, Maria; Tattersall, Peter; Tijssen, Peter.

J Gen Virol; 100(3): 367-368, 2019 03.

Artículo en Inglés | MEDLINE | ID: mdl-30672729

10.

ViCTree: an automated framework for taxonomic classification from protein sequences.

Modha, Sejal; Thanki, Anil S; Cotmore, Susan F; Davison, Andrew J; Hughes, Joseph.

Bioinformatics; 34(13): 2195-2200, 2018 07 01.

Artículo en Inglés | MEDLINE | ID: mdl-29474519

11.

GLUE: a flexible software system for virus sequence data.

Singer, Joshua B; Thomson, Emma C; McLauchlan, John; Hughes, Joseph; Gifford, Robert J.

BMC Bioinformatics; 19(1): 532, 2018 Dec 18.

Artículo en Inglés | MEDLINE | ID: mdl-30563445

12.

The Envelope Gene of Transmitted HIV-1 Resists a Late Interferon Gamma-Induced Block.

Rihn, Suzannah J; Foster, Toshana L; Busnadiego, Idoia; Aziz, Muhamad Afiq; Hughes, Joseph; Neil, Stuart J D; Wilson, Sam J.

J Virol; 91(7)2017 04 01.

Artículo en Inglés | MEDLINE | ID: mdl-28100611

13.

Late Ebola virus relapse causing meningoencephalitis: a case report.

Jacobs, Michael; Rodger, Alison; Bell, David J; Bhagani, Sanjay; Cropley, Ian; Filipe, Ana; Gifford, Robert J; Hopkins, Susan; Hughes, Joseph; Jabeen, Farrah; Johannessen, Ingolfur; Karageorgopoulos, Drosos; Lackenby, Angie; Lester, Rebecca; Liu, Rebecca S N; MacConnachie, Alisdair; Mahungu, Tabitha; Martin, Daniel; Marshall, Neal; Mepham, Stephen; Orton, Richard; Palmarini, Massimo; Patel, Monika; Perry, Colin; Peters, S Erica; Porter, Duncan; Ritchie, David; Ritchie, Neil D; Seaton, R Andrew; Sreenu, Vattipally B; Templeton, Kate; Warren, Simon; Wilkie, Gavin S; Zambon, Maria; Gopal, Robin; Thomson, Emma C.

Lancet; 388(10043): 498-503, 2016 Jul 30.

Artículo en Inglés | MEDLINE | ID: mdl-27209148

14.

Unexpected Interfarm Transmission Dynamics during a Highly Pathogenic Avian Influenza Epidemic.

Fusaro, Alice; Tassoni, Luca; Milani, Adelaide; Hughes, Joseph; Salviato, Annalisa; Murcia, Pablo R; Massi, Paola; Zamperin, Gianpiero; Bonfanti, Lebana; Marangon, Stefano; Cattoli, Giovanni; Monne, Isabella.

J Virol; 90(14): 6401-6411, 2016 07 15.

Artículo en Inglés | MEDLINE | ID: mdl-27147741

15.

Widespread Reassortment Shapes the Evolution and Epidemiology of Bluetongue Virus following European Invasion.

Nomikou, Kyriaki; Hughes, Joseph; Wash, Rachael; Kellam, Paul; Breard, Emmanuel; Zientara, Stéphan; Palmarini, Massimo; Biek, Roman; Mertens, Peter.

PLoS Pathog; 11(8): e1005056, 2015 Aug.

Artículo en Inglés | MEDLINE | ID: mdl-26252219

16.

Origins and Evolutionary Dynamics of H3N2 Canine Influenza Virus.

Zhu, Henan; Hughes, Joseph; Murcia, Pablo R.

J Virol; 89(10): 5406-18, 2015 May.

Artículo en Inglés | MEDLINE | ID: mdl-25740996

17.

Uneven genetic robustness of HIV-1 integrase.

Rihn, Suzannah J; Hughes, Joseph; Wilson, Sam J; Bieniasz, Paul D.

J Virol; 89(1): 552-67, 2015 Jan.

Artículo en Inglés | MEDLINE | ID: mdl-25339768

18.

Next-generation sequencing sheds light on the natural history of hepatitis C infection in patients who fail treatment.

Abdelrahman, Tamer; Hughes, Joseph; Main, Janice; McLauchlan, John; Thursz, Mark; Thomson, Emma.

Hepatology; 61(1): 88-97, 2015 Jan.

Artículo en Inglés | MEDLINE | ID: mdl-24797101

19.

Phylodynamic analysis of porcine circovirus type 2 reveals global waves of emerging genotypes and the circulation of recombinant forms.

Franzo, Giovanni; Cortey, Marti; Segalés, Joaquim; Hughes, Joseph; Drigo, Michele.

Mol Phylogenet Evol; 100: 269-280, 2016 07.

Artículo en Inglés | MEDLINE | ID: mdl-27114187

20.

Rapid evolution of the env gene leader sequence in cats naturally infected with feline immunodeficiency virus.

Beczkowski, Pawel M; Hughes, Joseph; Biek, Roman; Litster, Annette; Willett, Brian J; Hosie, Margaret J.

J Gen Virol; 96(Pt 4): 893-903, 2015 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-25535323

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