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1.

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.

Hoffmann, Markus; Kleine-Weber, Hannah; Schroeder, Simon; Krüger, Nadine; Herrler, Tanja; Erichsen, Sandra; Schiergens, Tobias S; Herrler, Georg; Wu, Nai-Huei; Nitsche, Andreas; Müller, Marcel A; Drosten, Christian; Pöhlmann, Stefan.

Cell; 181(2): 271-280.e8, 2020 04 16.

Artículo en Inglés | MEDLINE | ID: covidwho-4561

2.

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.

Hoffmann, Markus; Kleine-Weber, Hannah; Schroeder, Simon; Krüger, Nadine; Herrler, Tanja; Erichsen, Sandra; Schiergens, Tobias S; Herrler, Georg; Wu, Nai-Huei; Nitsche, Andreas; Müller, Marcel A; Drosten, Christian; Pöhlmann, Stefan.

Cell; 181(2): 271-280.e8, 2020 04 16.

Artículo en Inglés | MEDLINE | ID: mdl-32142651

3.

Infectious KoRV-related retroviruses circulating in Australian bats.

Hayward, Joshua A; Tachedjian, Mary; Kohl, Claudia; Johnson, Adam; Dearnley, Megan; Jesaveluk, Brianna; Langer, Christine; Solymosi, Philip D; Hille, Georg; Nitsche, Andreas; Sánchez, Cecilia A; Werner, Adam; Kontos, Dimitri; Crameri, Gary; Marsh, Glenn A; Baker, Michelle L; Poumbourios, Pantelis; Drummer, Heidi E; Holmes, Edward C; Wang, Lin-Fa; Smith, Ina; Tachedjian, Gilda.

Proc Natl Acad Sci U S A; 117(17): 9529-9536, 2020 04 28.

Artículo en Inglés | MEDLINE | ID: mdl-32284399

4.

Predicting bacterial virulence factors - evaluation of machine learning and negative data strategies.

Rentzsch, Robert; Deneke, Carlus; Nitsche, Andreas; Renard, Bernhard Y.

Brief Bioinform; 21(5): 1596-1608, 2020 09 25.

Artículo en Inglés | MEDLINE | ID: mdl-32978619

5.

Stable Isotope-Triggered Offset Fragmentation Allows Massively Multiplexed Target Profiling on Quadrupole-Orbitrap Mass Spectrometers.

Grossegesse, Marica; Hartkopf, Felix; Nitsche, Andreas; Doellinger, Joerg.

J Proteome Res; 19(7): 2854-2862, 2020 07 02.

Artículo en Inglés | MEDLINE | ID: mdl-32369372

6.

Perspective on Proteomics for Virus Detection in Clinical Samples.

Grossegesse, Marica; Hartkopf, Felix; Nitsche, Andreas; Schaade, Lars; Doellinger, Joerg; Muth, Thilo.

J Proteome Res; 19(11): 4380-4388, 2020 11 06.

Artículo en Inglés | MEDLINE | ID: mdl-33090795

7.

TaxIt: An Iterative Computational Pipeline for Untargeted Strain-Level Identification Using MS/MS Spectra from Pathogenic Single-Organism Samples.

Kuhring, Mathias; Doellinger, Joerg; Nitsche, Andreas; Muth, Thilo; Renard, Bernhard Y.

J Proteome Res; 19(6): 2501-2510, 2020 06 05.

Artículo en Inglés | MEDLINE | ID: mdl-32362126

8.

Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets.

Brinkmann, Annika; Andrusch, Andreas; Belka, Ariane; Wylezich, Claudia; Höper, Dirk; Pohlmann, Anne; Nordahl Petersen, Thomas; Lucas, Pierrick; Blanchard, Yannick; Papa, Anna; Melidou, Angeliki; Oude Munnink, Bas B; Matthijnssens, Jelle; Deboutte, Ward; Ellis, Richard J; Hansmann, Florian; Baumgärtner, Wolfgang; van der Vries, Erhard; Osterhaus, Albert; Camma, Cesare; Mangone, Iolanda; Lorusso, Alessio; Marcacci, Maurilia; Nunes, Alexandra; Pinto, Miguel; Borges, Vítor; Kroneman, Annelies; Schmitz, Dennis; Corman, Victor Max; Drosten, Christian; Jones, Terry C; Hendriksen, Rene S; Aarestrup, Frank M; Koopmans, Marion; Beer, Martin; Nitsche, Andreas.

J Clin Microbiol; 57(8)2019 08.

Artículo en Inglés | MEDLINE | ID: mdl-31167846

9.

PriLive: privacy-preserving real-time filtering for next-generation sequencing.

Loka, Tobias P; Tausch, Simon H; Dabrowski, Piotr W; Radonic, Aleksandar; Nitsche, Andreas; Renard, Bernhard Y.

Bioinformatics; 34(14): 2376-2383, 2018 07 15.

Artículo en Inglés | MEDLINE | ID: mdl-29522157

10.

PAIPline: pathogen identification in metagenomic and clinical next generation sequencing samples.

Andrusch, Andreas; Dabrowski, Piotr W; Klenner, Jeanette; Tausch, Simon H; Kohl, Claudia; Osman, Abdalla A; Renard, Bernhard Y; Nitsche, Andreas.

Bioinformatics; 34(17): i715-i721, 2018 09 01.

Artículo en Inglés | MEDLINE | ID: mdl-30423069

11.

LiveKraken--real-time metagenomic classification of illumina data.

Tausch, Simon H; Strauch, Benjamin; Andrusch, Andreas; Loka, Tobias P; Lindner, Martin S; Nitsche, Andreas; Renard, Bernhard Y.

Bioinformatics; 34(21): 3750-3752, 2018 11 01.

Artículo en Inglés | MEDLINE | ID: mdl-29868852

12.

Travel-associated neurological disease terminated in a postmortem diagnosed atypical HSV-1 encephalitis after high-dose steroid therapy - a case report.

Osterman, Andreas; Ruf, Viktoria C; Domingo, Cristina; Nitsche, Andreas; Eichhorn, Peter; Zimmermann, Hanna; Seelos, Klaus; Zange, Sabine; Dimitriadis, Konstantinos; Pfister, Hans-Walter; Thye, Thorsten; Giese, Armin; Tappe, Dennis; Böhm, Stephan.

BMC Infect Dis; 20(1): 150, 2020 Feb 18.

Artículo en Inglés | MEDLINE | ID: mdl-32070282

13.

Serology- and PCR-based cumulative incidence of SARS-CoV-2 infection in adults in a successfully contained early hotspot (CoMoLo study), Germany, May to June 2020.

Santos-Hövener, Claudia; Neuhauser, Hannelore K; Rosario, Angelika Schaffrath; Busch, Markus; Schlaud, Martin; Hoffmann, Robert; Gößwald, Antje; Koschollek, Carmen; Hoebel, Jens; Allen, Jennifer; Haack-Erdmann, Antje; Brockmann, Stefan; Ziese, Thomas; Nitsche, Andreas; Michel, Janine; Haller, Sebastian; Wilking, Hendrik; Hamouda, Osamah; Corman, Victor M; Drosten, Christian; Schaade, Lars; Wieler, Lothar H; Lampert, Thomas.

Euro Surveill; 25(47)2020 11.

Artículo en Inglés | MEDLINE | ID: mdl-33243353

14.

Vier Jahre nach der Ebolakrise : Herausforderungen, Erfahrungen und Schlussfolgerungen für den Öffentlichen Gesundheitsdienst in Deutschland. / [Four years after the Ebola crisis : Challenges, experiences, and implications in the German public health context].

Hunger, Iris; Becker, Stephan; Frank, Christina; Grunow, Roland; Herzog, Christian; Kurth, Andreas; Monazahian, Masyar; Nitsche, Andreas; Sasse, Julia; Schulz-Weidhaas, Claudia; Wollin, Klaus-Michael; Schaade, Lars.

Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz; 62(9): 1041-1051, 2019 Sep.

Artículo en Alemán | MEDLINE | ID: mdl-31428830

15.

HiLive: real-time mapping of illumina reads while sequencing.

Lindner, Martin S; Strauch, Benjamin; Schulze, Jakob M; Tausch, Simon H; Dabrowski, Piotr W; Nitsche, Andreas; Renard, Bernhard Y.

Bioinformatics; 33(6): 917-319, 2017 03 15.

Artículo en Inglés | MEDLINE | ID: mdl-27794555

16.

Need for additional capacity and improved capability for molecular detection of yellow fever virus in European Expert Laboratories: External Quality Assessment, March 2018.

Domingo, Cristina; Ellerbrok, Heinz; Koopmans, Marion; Nitsche, Andreas; Leitmeyer, Katrin; Charrel, Rémi N; Reusken, Chantal B E M.

Euro Surveill; 23(28)2018 07.

Artículo en Inglés | MEDLINE | ID: mdl-30017021

17.

Berlin Squirrelpox Virus, a New Poxvirus in Red Squirrels, Berlin, Germany.

Wibbelt, Gudrun; Tausch, Simon H; Dabrowski, Piotr W; Kershaw, Olivia; Nitsche, Andreas; Schrick, Livia.

Emerg Infect Dis; 23(10): 1726-1729, 2017 10.

Artículo en Inglés | MEDLINE | ID: mdl-28930029

18.

Comparing Viral Metagenomic Extraction Methods.

Klenner, Jeanette; Kohl, Claudia; Dabrowski, Piotr Wojtek; Nitsche, Andreas.

Curr Issues Mol Biol; 24: 59-70, 2017.

Artículo en Inglés | MEDLINE | ID: mdl-28686568

19.

A novel rhabdovirus, related to Merida virus, in field-collected mosquitoes from Anatolia and Thrace.

Ergünay, Koray; Brinkmann, Annika; Litzba, Nadine; Günay, Filiz; Kar, Sirri; Öter, Kerem; Örsten, Serra; Sarikaya, Yasemen; Alten, Bülent; Nitsche, Andreas; Linton, Yvonne-Marie.

Arch Virol; 162(7): 1903-1911, 2017 Jul.

Artículo en Inglés | MEDLINE | ID: mdl-28283817

20.

In vivo evidence for ribavirin-induced mutagenesis of the hepatitis E virus genome.

Todt, Daniel; Gisa, Anett; Radonic, Aleksandar; Nitsche, Andreas; Behrendt, Patrick; Suneetha, Pothakamuri Venkata; Pischke, Sven; Bremer, Birgit; Brown, Richard J P; Manns, Michael P; Cornberg, Markus; Bock, C Thomas; Steinmann, Eike; Wedemeyer, Heiner.

Gut; 65(10): 1733-43, 2016 10.

Artículo en Inglés | MEDLINE | ID: mdl-27222534

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SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.

Infectious KoRV-related retroviruses circulating in Australian bats.

Predicting bacterial virulence factors - evaluation of machine learning and negative data strategies.

Stable Isotope-Triggered Offset Fragmentation Allows Massively Multiplexed Target Profiling on Quadrupole-Orbitrap Mass Spectrometers.

Perspective on Proteomics for Virus Detection in Clinical Samples.

TaxIt: An Iterative Computational Pipeline for Untargeted Strain-Level Identification Using MS/MS Spectra from Pathogenic Single-Organism Samples.

Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets.

PriLive: privacy-preserving real-time filtering for next-generation sequencing.

PAIPline: pathogen identification in metagenomic and clinical next generation sequencing samples.

LiveKraken--real-time metagenomic classification of illumina data.

Travel-associated neurological disease terminated in a postmortem diagnosed atypical HSV-1 encephalitis after high-dose steroid therapy - a case report.

Serology- and PCR-based cumulative incidence of SARS-CoV-2 infection in adults in a successfully contained early hotspot (CoMoLo study), Germany, May to June 2020.

Vier Jahre nach der Ebolakrise : Herausforderungen, Erfahrungen und Schlussfolgerungen für den Öffentlichen Gesundheitsdienst in Deutschland. / [Four years after the Ebola crisis : Challenges, experiences, and implications in the German public health context].

HiLive: real-time mapping of illumina reads while sequencing.

Need for additional capacity and improved capability for molecular detection of yellow fever virus in European Expert Laboratories: External Quality Assessment, March 2018.

Berlin Squirrelpox Virus, a New Poxvirus in Red Squirrels, Berlin, Germany.

Comparing Viral Metagenomic Extraction Methods.

A novel rhabdovirus, related to Merida virus, in field-collected mosquitoes from Anatolia and Thrace.

In vivo evidence for ribavirin-induced mutagenesis of the hepatitis E virus genome.