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1.

A Viral (Arc)hive for Metazoan Memory.

Parrish, Nicholas F; Tomonaga, Keizo.

Cell; 172(1-2): 8-10, 2018 01 11.

Artículo en Inglés | MEDLINE | ID: mdl-29328922

2.

Virus-like insertions with sequence signatures similar to those of endogenous nonretroviral RNA viruses in the human genome.

Kojima, Shohei; Yoshikawa, Kohei; Ito, Jumpei; Nakagawa, So; Parrish, Nicholas F; Horie, Masayuki; Kawano, Shuichi; Tomonaga, Keizo.

Proc Natl Acad Sci U S A; 118(5)2021 Feb 02.

Artículo en Inglés | MEDLINE | ID: mdl-33495343

3.

Endogenization and excision of human herpesvirus 6 in human genomes.

Liu, Xiaoxi; Kosugi, Shunichi; Koide, Rie; Kawamura, Yoshiki; Ito, Jumpei; Miura, Hiroki; Matoba, Nana; Matsuzaki, Motomichi; Fujita, Masashi; Kamada, Anselmo Jiro; Nakagawa, Hidewaki; Tamiya, Gen; Matsuda, Koichi; Murakami, Yoshinori; Kubo, Michiaki; Aswad, Amr; Sato, Kei; Momozawa, Yukihide; Ohashi, Jun; Terao, Chikashi; Yoshikawa, Tetsushi; Parrish, Nicholas F; Kamatani, Yoichiro.

PLoS Genet; 16(8): e1008915, 2020 08.

Artículo en Inglés | MEDLINE | ID: mdl-32776928

4.

piRNA-Guided CRISPR-like Immunity in Eukaryotes.

Ophinni, Youdiil; Palatini, Umberto; Hayashi, Yoshitake; Parrish, Nicholas F.

Trends Immunol; 40(11): 998-1010, 2019 11.

Artículo en Inglés | MEDLINE | ID: mdl-31679813

5.

Evolutionary history of endogenous Human Herpesvirus 6 reflects human migration out of Africa.

Aswad, Amr; Aimola, Giulia; Wight, Darren; Roychoudhury, Pavitra; Zimmermann, Cosima; Hill, Joshua; Lassner, Dirk; Xie, Hong; Huang, Meei-Li; Parrish, Nicholas F; Schultheiss, Heinz-Peter; Venturini, Cristina; Lager, Susanne; Smith, Gordon C S; Charnock-Jones, D Stephen; Breuer, Judith; Greninger, Alexander L; Kaufer, Benedikt B.

Mol Biol Evol; 2020 Jul 28.

Artículo en Inglés | MEDLINE | ID: mdl-32722766

6.

piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals.

Parrish, Nicholas F; Fujino, Kan; Shiromoto, Yusuke; Iwasaki, Yuka W; Ha, Hongseok; Xing, Jinchuan; Makino, Akiko; Kuramochi-Miyagawa, Satomi; Nakano, Toru; Siomi, Haruhiko; Honda, Tomoyuki; Tomonaga, Keizo.

RNA; 21(10): 1691-703, 2015 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-26283688

7.

Phenotypic properties of transmitted founder HIV-1.

Parrish, Nicholas F; Gao, Feng; Li, Hui; Giorgi, Elena E; Barbian, Hannah J; Parrish, Erica H; Zajic, Lara; Iyer, Shilpa S; Decker, Julie M; Kumar, Amit; Hora, Bhavna; Berg, Anna; Cai, Fangping; Hopper, Jennifer; Denny, Thomas N; Ding, Haitao; Ochsenbauer, Christina; Kappes, John C; Galimidi, Rachel P; West, Anthony P; Bjorkman, Pamela J; Wilen, Craig B; Doms, Robert W; O'Brien, Meagan; Bhardwaj, Nina; Borrow, Persephone; Haynes, Barton F; Muldoon, Mark; Theiler, James P; Korber, Bette; Shaw, George M; Hahn, Beatrice H.

Proc Natl Acad Sci U S A; 110(17): 6626-33, 2013 Apr 23.

Artículo en Inglés | MEDLINE | ID: mdl-23542380

8.

Transmitted/founder and chronic HIV-1 envelope proteins are distinguished by differential utilization of CCR5.

Parker, Zahra F; Iyer, Shilpa S; Wilen, Craig B; Parrish, Nicholas F; Chikere, Kelechi C; Lee, Fang-Hua; Didigu, Chuka A; Berro, Reem; Klasse, Per Johan; Lee, Benhur; Moore, John P; Shaw, George M; Hahn, Beatrice H; Doms, Robert W.

J Virol; 87(5): 2401-11, 2013 Mar.

Artículo en Inglés | MEDLINE | ID: mdl-23269796

9.

Transmitted/founder and chronic subtype C HIV-1 use CD4 and CCR5 receptors with equal efficiency and are not inhibited by blocking the integrin α4ß7.

Parrish, Nicholas F; Wilen, Craig B; Banks, Lauren B; Iyer, Shilpa S; Pfaff, Jennifer M; Salazar-Gonzalez, Jesus F; Salazar, Maria G; Decker, Julie M; Parrish, Erica H; Berg, Anna; Hopper, Jennifer; Hora, Bhavna; Kumar, Amit; Mahlokozera, Tatenda; Yuan, Sally; Coleman, Charl; Vermeulen, Marion; Ding, Haitao; Ochsenbauer, Christina; Tilton, John C; Permar, Sallie R; Kappes, John C; Betts, Michael R; Busch, Michael P; Gao, Feng; Montefiori, David; Haynes, Barton F; Shaw, George M; Hahn, Beatrice H; Doms, Robert W.

PLoS Pathog; 8(5): e1002686, 2012.

Artículo en Inglés | MEDLINE | ID: mdl-22693444

10.

Mucosal simian immunodeficiency virus transmission in African green monkeys: susceptibility to infection is proportional to target cell availability at mucosal sites.

Pandrea, Ivona; Parrish, Nicholas F; Raehtz, Kevin; Gaufin, Thaidra; Barbian, Hannah J; Ma, Dongzhu; Kristoff, Jan; Gautam, Rajeev; Zhong, Fang; Haret-Richter, George S; Trichel, Anita; Shaw, George M; Hahn, Beatrice H; Apetrei, Cristian.

J Virol; 86(8): 4158-68, 2012 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-22318138

11.

Phenotypic and immunologic comparison of clade B transmitted/founder and chronic HIV-1 envelope glycoproteins.

Wilen, Craig B; Parrish, Nicholas F; Pfaff, Jennifer M; Decker, Julie M; Henning, Elizabeth A; Haim, Hillel; Petersen, Josiah E; Wojcechowskyj, Jason A; Sodroski, Joseph; Haynes, Barton F; Montefiori, David C; Tilton, John C; Shaw, George M; Hahn, Beatrice H; Doms, Robert W.

J Virol; 85(17): 8514-27, 2011 Sep.

Artículo en Inglés | MEDLINE | ID: mdl-21715507

12.

Primary infection by a human immunodeficiency virus with atypical coreceptor tropism.

Jiang, Chunlai; Parrish, Nicholas F; Wilen, Craig B; Li, Hui; Chen, Yue; Pavlicek, Jeffrey W; Berg, Anna; Lu, Xiaozhi; Song, Hongshuo; Tilton, John C; Pfaff, Jennifer M; Henning, Elizabeth A; Decker, Julie M; Moody, M Anthony; Drinker, Mark S; Schutte, Robert; Freel, Stephanie; Tomaras, Georgia D; Nedellec, Rebecca; Mosier, Donald E; Haynes, Barton F; Shaw, George M; Hahn, Beatrice H; Doms, Robert W; Gao, Feng.

J Virol; 85(20): 10669-81, 2011 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-21835785

13.

Genetic identity and biological phenotype of a transmitted/founder virus representative of nonpathogenic simian immunodeficiency virus infection in African green monkeys.

Gnanadurai, Clement Wesley; Pandrea, Ivona; Parrish, Nicholas F; Kraus, Matthias H; Learn, Gerald H; Salazar, Maria G; Sauermann, Ulrike; Töpfer, Katharina; Gautam, Rajeev; Münch, Jan; Stahl-Hennig, Christiane; Apetrei, Christian; Hahn, Beatrice H; Kirchhoff, Frank.

J Virol; 84(23): 12245-54, 2010 Dec.

Artículo en Inglés | MEDLINE | ID: mdl-20881048

14.

Endogenous retroviruses drive species-specific germline transcriptomes in mammals.

Sakashita, Akihiko; Maezawa, So; Takahashi, Kazuki; Alavattam, Kris G; Yukawa, Masashi; Hu, Yueh-Chiang; Kojima, Shohei; Parrish, Nicholas F; Barski, Artem; Pavlicev, Mihaela; Namekawa, Satoshi H.

Nat Struct Mol Biol; 27(10): 967-977, 2020 10.

Artículo en Inglés | MEDLINE | ID: mdl-32895553

15.

The Changing Face of Liver Transplantation in the United States: The Effect of HCV Antiviral Eras on Transplantation Trends and Outcomes.

Parrish, Nicholas F; Feurer, Irene D; Matsuoka, Lea K; Rega, Scott A; Perri, Roman; Alexopoulos, Sophoclis P.

Transplant Direct; 5(3): e427, 2019 Mar.

Artículo en Inglés | MEDLINE | ID: mdl-30882032

16.

Species-specific host factors rather than virus-intrinsic virulence determine primate lentiviral pathogenicity.

Joas, Simone; Parrish, Erica H; Gnanadurai, Clement W; Lump, Edina; Stürzel, Christina M; Parrish, Nicholas F; Learn, Gerald H; Sauermann, Ulrike; Neumann, Berit; Rensing, Kerstin Mätz; Fuchs, Dietmar; Billingsley, James M; Bosinger, Steven E; Silvestri, Guido; Apetrei, Cristian; Huot, Nicolas; Garcia-Tellez, Thalia; Müller-Trutwin, Michaela; Hotter, Dominik; Sauter, Daniel; Stahl-Hennig, Christiane; Hahn, Beatrice H; Kirchhoff, Frank.

Nat Commun; 9(1): 1371, 2018 04 10.

Artículo en Inglés | MEDLINE | ID: mdl-29636452

17.

Endogenized viral sequences in mammals.

Parrish, Nicholas F; Tomonaga, Keizo.

Curr Opin Microbiol; 31: 176-183, 2016 06.

Artículo en Inglés | MEDLINE | ID: mdl-27128186

18.

Chromosomally-integrated human herpesvirus 6 and autoimmune connective tissue diseases.

Kojima, Shohei; Parrish, Nicholas F; Terao, Chikashi.

J Clin Virol; 134: 104714, 2021 Jan.

Artículo en Inglés | MEDLINE | ID: mdl-33338895

19.

Transcription Profiling Demonstrates Epigenetic Control of Non-retroviral RNA Virus-Derived Elements in the Human Genome.

Sofuku, Kozue; Parrish, Nicholas F; Honda, Tomoyuki; Tomonaga, Keizo.

Cell Rep; 12(10): 1548-54, 2015 Sep 08.

Artículo en Inglés | MEDLINE | ID: mdl-26321645

20.

Borna disease virus possesses an NF-Ä¸B inhibitory sequence in the nucleoprotein gene.

Makino, Akiko; Fujino, Kan; Parrish, Nicholas F; Honda, Tomoyuki; Tomonaga, Keizo.

Sci Rep; 5: 8696, 2015 Mar 03.

Artículo en Inglés | MEDLINE | ID: mdl-25733193

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