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1.

Positive selection in dNTPase SAMHD1 throughout mammalian evolution.

Monit, Christopher; Morris, Elizabeth R; Ruis, Christopher; Szafran, Bart; Thiltgen, Grant; Tsai, Ming-Han Chloe; Mitchison, N Avrion; Bishop, Kate N; Stoye, Jonathan P; Taylor, Ian A; Fassati, Ariberto; Goldstein, Richard A.

Proc Natl Acad Sci U S A; 116(37): 18647-18654, 2019 09 10.

Artículo en Inglés | MEDLINE | ID: mdl-31451672

2.

Deep sequencing reveals persistence of cell-associated mumps vaccine virus in chronic encephalitis.

Morfopoulou, Sofia; Mee, Edward T; Connaughton, Sarah M; Brown, Julianne R; Gilmour, Kimberly; Chong, W K 'Kling'; Duprex, W Paul; Ferguson, Deborah; Hubank, Mike; Hutchinson, Ciaran; Kaliakatsos, Marios; McQuaid, Stephen; Paine, Simon; Plagnol, Vincent; Ruis, Christopher; Virasami, Alex; Zhan, Hong; Jacques, Thomas S; Schepelmann, Silke; Qasim, Waseem; Breuer, Judith.

Acta Neuropathol; 133(1): 139-147, 2017 01.

Artículo en Inglés | MEDLINE | ID: mdl-27770235

3.

Mutagenesis in Norovirus in Response to Favipiravir Treatment.

Ruis, Christopher; Brown, Li-An K; Roy, Sunando; Atkinson, Claire; Williams, Rachel; Burns, Siobhan O; Yara-Romero, Erika; Jacobs, Michael; Goldstein, Richard; Breuer, Judith; Lowe, David M.

N Engl J Med; 379(22): 2173-2176, 2018 11 29.

Artículo en Inglés | MEDLINE | ID: mdl-30485769

4.

Norovirus Whole-Genome Sequencing by SureSelect Target Enrichment: a Robust and Sensitive Method.

Brown, Julianne R; Roy, Sunando; Ruis, Christopher; Yara Romero, Erika; Shah, Divya; Williams, Rachel; Breuer, Judy.

J Clin Microbiol; 54(10): 2530-7, 2016 10.

Artículo en Inglés | MEDLINE | ID: mdl-27487952

5.

Novel Insights Into the Spread of Enteric Pathogens Using Genomics.

Domman, Daryl; Ruis, Christopher; Dorman, Matthew J; Shakya, Migun; Chain, Patrick S G.

J Infect Dis; 221(Supplement_3): S319-S330, 2020 Mar 28.

Artículo en Inglés | MEDLINE | ID: mdl-31538189

6.

A comprehensive characterization of chronic norovirus infection in immunodeficient hosts.

Brown, Li-An K; Ruis, Christopher; Clark, Ian; Roy, Sunando; Brown, Julianne R; Albuquerque, Adriana S; Patel, Smita Y; Miller, Joanne; Karim, Mohammed Yousuf; Dervisevic, Samir; Moore, Jennifer; Williams, Charlotte A; Cudini, Juliana; Moreira, Fernando; Neild, Penny; Seneviratne, Suranjith L; Workman, Sarita; Toumpanakis, Christos; Atkinson, Claire; Burns, Siobhan O; Breuer, Judith; Lowe, David M.

J Allergy Clin Immunol; 144(5): 1450-1453, 2019 11.

Artículo en Inglés | MEDLINE | ID: mdl-31415785

7.

Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology.

Rambaut, Andrew; Holmes, Edward C; O'Toole, Áine; Hill, Verity; McCrone, John T; Ruis, Christopher; du Plessis, Louis; Pybus, Oliver G.

Nat Microbiol; 6(3): 415, 2021 Mar.

Artículo en Inglés | MEDLINE | ID: mdl-33514928

8.

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK.

du Plessis, Louis; McCrone, John T; Zarebski, Alexander E; Hill, Verity; Ruis, Christopher; Gutierrez, Bernardo; Raghwani, Jayna; Ashworth, Jordan; Colquhoun, Rachel; Connor, Thomas R; Faria, Nuno R; Jackson, Ben; Loman, Nicholas J; O'Toole, Áine; Nicholls, Samuel M; Parag, Kris V; Scher, Emily; Vasylyeva, Tetyana I; Volz, Erik M; Watts, Alexander; Bogoch, Isaac I; Khan, Kamran; Aanensen, David M; Kraemer, Moritz U G; Rambaut, Andrew; Pybus, Oliver G.

Science; 371(6530): 708-712, 2021 02 12.

Artículo en Inglés | MEDLINE | ID: mdl-33419936

9.

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology.

Rambaut, Andrew; Holmes, Edward C; O'Toole, Áine; Hill, Verity; McCrone, John T; Ruis, Christopher; du Plessis, Louis; Pybus, Oliver G.

Nat Microbiol; 5(11): 1403-1407, 2020 11.

Artículo en Inglés | MEDLINE | ID: mdl-32669681

10.

Producing polished prokaryotic pangenomes with the Panaroo pipeline.

Tonkin-Hill, Gerry; MacAlasdair, Neil; Ruis, Christopher; Weimann, Aaron; Horesh, Gal; Lees, John A; Gladstone, Rebecca A; Lo, Stephanie; Beaudoin, Christopher; Floto, R Andres; Frost, Simon D W; Corander, Jukka; Bentley, Stephen D; Parkhill, Julian.

Genome Biol; 21(1): 180, 2020 07 22.

Artículo en Inglés | MEDLINE | ID: mdl-32698896

11.

The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission.

Ruis, Christopher; Roy, Sunando; Brown, Julianne R; Allen, David J; Goldstein, Richard A; Breuer, Judith.

PLoS One; 12(6): e0179572, 2017.

Artículo en Inglés | MEDLINE | ID: mdl-28662035

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