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1.
Proc Natl Acad Sci U S A ; 116(45): 22485-22490, 2019 11 05.
Artículo en Inglés | MEDLINE | ID: mdl-31570619

RESUMEN

Self-assembly is widely used by biological systems to build functional nanostructures, such as the protein capsids of RNA viruses. But because assembly is a collective phenomenon involving many weakly interacting subunits and a broad range of timescales, measurements of the assembly pathways have been elusive. We use interferometric scattering microscopy to measure the assembly kinetics of individual MS2 bacteriophage capsids around MS2 RNA. By recording how many coat proteins bind to each of many individual RNA strands, we find that assembly proceeds by nucleation followed by monotonic growth. Our measurements reveal the assembly pathways in quantitative detail and also show their failure modes. We use these results to critically examine models of the assembly process.


Asunto(s)
Cápside/metabolismo , Levivirus/fisiología , Virus ARN/fisiología , ARN Viral/genética , Virión/fisiología , Ensamble de Virus , Cápside/química , Proteínas de la Cápside/química , Proteínas de la Cápside/genética , Proteínas de la Cápside/metabolismo , Genoma Viral , Cinética , Levivirus/química , Levivirus/genética , Levivirus/crecimiento & desarrollo , Virus ARN/química , Virus ARN/genética , Virus ARN/crecimiento & desarrollo , ARN Viral/química , ARN Viral/metabolismo , Virión/química , Virión/genética
2.
Lett Appl Microbiol ; 70(4): 282-289, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-31894582

RESUMEN

Outbreaks of viral gastroenteritis are often connected to contaminated drinking water. The assessment of the water quality relies on the cultivation of indicator bacteria, and little is known of the fate of viruses in groundwater, especially in arctic regions. In Iceland, the groundwater temperature is between 3 and 6°C. The aim of this study was to determine virus inactivation at low temperature in a groundwater microcosm and in a borehole in a postglacial lava field. Two phage species that are commonly used as surrogates for norovirus were used, MS2 and PhiX174. Dialysis bags were used for the samples, and a device was constructed to hold many samples at a time and protect the samples in the borehole. No significant decrease of infective PhiX174 phages in the borehole or of the MS2 phages in the microcosm was observed. A slightly significant decrease of PhiX174 in the microcosm was noticed, with one log reduction time of 476 days. On the other hand, a significant reduction in MS2 was found in the field test, where the time needed for 90% reduction was 12·5 days. The results showed that an infective virus can exist in groundwater for months or years in arctic regions and a great difference may exist between results from microcosm and field tests. SIGNIFICANCE AND IMPACT OF THE STUDY: This study reveals that arctic regions are highly sensitive to virus contamination as an infective virus may exist in groundwater for years at low temperature. The results also show that the virus inactivation observed in field tests may differ considerably from the inactivation observed in laboratory microcosms. The results emphasize the importance of large protection zones around drinking water intakes as well as good wastewater treatment so that the likelihood of faecal contamination of groundwater is reduced.


Asunto(s)
Agua Subterránea/virología , Levivirus/fisiología , Inactivación de Virus , Frío , Heces/virología , Agua Subterránea/química , Islandia , Levivirus/crecimiento & desarrollo , Temperatura , Contaminación del Agua/análisis , Calidad del Agua
3.
Food Microbiol ; 87: 103354, 2020 May.
Artículo en Inglés | MEDLINE | ID: mdl-31948611

RESUMEN

Viruses are transmissible via their interaction with contact surfaces of food containers or tools. This study evaluated the recoveries of MS2 coliphage, a virus surrogate, from polypropylene (PP), polyvinyl chloride (PVC), polyethylene (PE), and glass (borosilicate and soda lime), as influenced by the surface chemistry and topography. MS2 (5-6 logs) in PBS with 1% TSB was inoculated onto each of 9 different surfaces, 24-h cold-incubated, and recovery was quantified by infectivity. The order of MS2 recovery efficiency from smooth surfaces was PP > PE ≥ soda lime glass, which classified into 3 ANOVA groups, p = 0.05. The MS2 recovery ratios of smooth vs. rough surfaces were 1.4-1.5. Atomic force microscopy revealed 21-nm diam pinholes (<28-nm of MS2 size) in the borosilicate glass. The lowest and highest MS2 recoveries among the 9 surfaces were demonstrated by the hole-bearing borosilicate glass (34 ±â€¯8%) and smooth PP (69 ±â€¯14%) respectively. Generally greater MS2 recovery was obtained from smooth PP and PE surfaces compared to glass, but topographic alterations (pinholes or increased roughness) decreased recovery possibly by trapping the viruses.


Asunto(s)
Vidrio/química , Levivirus/fisiología , Polímeros/química , Levivirus/química , Levivirus/crecimiento & desarrollo , Levivirus/aislamiento & purificación , Microscopía de Fuerza Atómica , Propiedades de Superficie , Acoplamiento Viral
4.
J Bacteriol ; 199(12)2017 06 15.
Artículo en Inglés | MEDLINE | ID: mdl-28396351

RESUMEN

The L protein of the single-stranded RNA phage MS2 causes lysis of Escherichia coli without inducing bacteriolytic activity or inhibiting net peptidoglycan (PG) synthesis. To find host genes required for L-mediated lysis, spontaneous Ill (insensitivity to Llysis) mutants were selected as survivors of L expression and shown to have a missense change of the highly conserved proline (P330Q) in the C-terminal domain of DnaJ. In the dnaJP330Q mutant host, L-mediated lysis is completely blocked at 30°C without affecting the intracellular levels of L. At higher temperatures (37°C and 42°C), both lysis and L accumulation are delayed. The lysis block at 30°C in the dnaJP330Q mutant was recessive and could be suppressed by Lovercomes dnaJ (Lodj ) alleles selected for restoration of lysis. All three Lodj alleles lack the highly basic N-terminal half of the lysis protein and cause lysis ∼20 min earlier than full-length L. DnaJ was found to form a complex with full-length L. This complex was abrogated by the P330Q mutation and was absent with the Lodj truncations. These results suggest that, in the absence of interaction with DnaJ, the N-terminal domain of L interferes with its ability to bind to its unknown target. The lysis retardation and DnaJ chaperone dependency conferred by the nonessential, highly basic N-terminal domain of L resembles the SlyD chaperone dependency conferred by the highly basic C-terminal domain of the E lysis protein of ϕX174, suggesting a common theme where single-gene lysis can be modulated by host factors influenced by physiological conditions.IMPORTANCE Small single-stranded nucleic acid lytic phages (Microviridae and Leviviridae) lyse their host by expressing a single "protein antibiotic." The protein antibiotics from two out of three prototypic small lytic viruses have been shown to inhibit two different steps in the conserved PG biosynthesis pathway. However, the molecular basis of lysis caused by L, the lysis protein of the third prototypic virus, MS2, is unknown. The significance of our research lies in the identification of DnaJ as a chaperone in the MS2 L lysis pathway and the identification of the minimal lytic domain of MS2 L. Additionally, our research highlights the importance of the highly conserved P330 residue in the C-terminal domain of DnaJ for specific protein interactions.


Asunto(s)
Bacteriólisis , Proteínas de Escherichia coli/metabolismo , Escherichia coli/virología , Proteínas del Choque Térmico HSP40/metabolismo , Interacciones Huésped-Parásitos , Levivirus/crecimiento & desarrollo , Proteínas Virales/metabolismo , Proteínas de Escherichia coli/genética , Proteínas del Choque Térmico HSP40/genética , Temperatura
5.
Appl Environ Microbiol ; 83(23)2017 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-28939600

RESUMEN

This study examined the inactivation of human norovirus (HuNoV) GI.1 and GII.4 by chlorine under conditions mimicking sewage treatment. Using a porcine gastric mucin-magnetic bead (PGM-MB) assay, no statistically significant loss in HuNoV binding (inactivation) was observed for secondary effluent treatments of ≤25 ppm total chlorine; for both strains, 50 and 100 ppm treatments resulted in ≤0.8-log10 unit and ≥3.9-log10 unit reductions, respectively. Treatments of 10, 25, 50, and 100 ppm chlorine inactivated 0.31, 1.35, >5, and >5 log10 units, respectively, of the norovirus indicator MS2 bacteriophage. Evaluation of treatment time indicated that the vast majority of MS2 and HuNoV inactivation occurred in the first 5 min for 0.2-µm-filtered, prechlorinated secondary effluent. Free chlorine measurements of secondary effluent seeded with MS2 and HuNoV demonstrated substantial oxidative burdens. With 25, 50, and 100 ppm treatments, free chlorine levels after 5 min of exposure ranged from 0.21 to 0.58 ppm, from 0.28 to 16.7 ppm, and from 11.6 to 53 ppm, respectively. At chlorine treatment levels of >50 ppm, statistically significant differences were observed between reductions for PGM-MB-bound HuNoV (potentially infectious) particles and those for unbound (noninfectious) HuNoV particles or total norovirus particles. While results suggested that MS2 and HuNoV (measured as PGM-MB binding) behave similarly, although not identically, both have limited susceptibility to chlorine treatments of ≤25 ppm total chlorine. Since sewage treatment is performed at ≤25 ppm total chlorine, targeting free chlorine levels of 0.5 to 1.0 ppm, these results suggest that traditional chlorine-based sewage treatment does not inactivate HuNoV efficiently.IMPORTANCE HuNoV is ubiquitous in sewage. A receptor binding assay was used to assess inactivation of HuNoV by chlorine-based sewage treatment, given that the virus cannot be routinely propagated in vitro Results reported here indicate that chlorine treatment of sewage is not effective for inactivating HuNoV unless chlorine levels are above those routinely used for sewage treatment.


Asunto(s)
Cloro/farmacología , Desinfectantes/farmacología , Levivirus/efectos de los fármacos , Norovirus/efectos de los fármacos , Aguas del Alcantarillado/virología , Eliminación de Residuos Líquidos/métodos , Animales , Humanos , Levivirus/crecimiento & desarrollo , Norovirus/crecimiento & desarrollo , Aguas del Alcantarillado/química , Porcinos , Inactivación de Virus/efectos de los fármacos
6.
J Appl Microbiol ; 120(3): 805-15, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26751045

RESUMEN

AIMS: State-of-the-art bioaerosol samplers have poor collection efficiencies for ultrafine virus aerosols. This work evaluated the performance of a novel growth tube collector (GTC), which utilizes laminar-flow water-based condensation to facilitate particle growth, for the collection of airborne MS2 viruses. METHODS AND RESULTS: Fine aerosols (<500 nm) containing MS2 coliphage were generated from a Collison nebulizer, conditioned by a dilution dryer and collected by a GTC and a BioSampler. The GTC effectively condensed water vapour onto the virus particles, creating droplets 2-5 µm in diameter, which facilitated collection. Comparison of particle counts upstream and downstream revealed that the GTC collected >93% of the inlet virus particles, whereas the BioSampler's efficiency was about 10%. Viable counts of the GTC-collected viruses were also one order of magnitude higher than those of the BioSampler (P = 0·003). CONCLUSION: The efficiency of the GTC for the viable collection of MS2 viruses exceeds that of industry standard instrument, the BioSampler, by a factor of 10-100. SIGNIFICANCE AND IMPACT OF THE STUDY: This study reveals that the GTC is an effective collector of viable MS2 aerosols, and concludes the instrument will be an effective tool for studying viable virus aerosols and the inhalation risks posed by airborne viruses.


Asunto(s)
Aerosoles/química , Microbiología del Aire , Levivirus/aislamiento & purificación , Virología/métodos , Levivirus/crecimiento & desarrollo , Tamaño de la Partícula , Virología/instrumentación
7.
J Appl Microbiol ; 118(6): 1315-20, 2015 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-25739420

RESUMEN

AIMS: To avoid interference by water-iodine disinfection chemistry and measure directly the effect of iodine, captured from a triiodide complex bound to a filter medium, on viability of penetrating viral particles. METHODS AND RESULTS: Aerosols of MS2 coli phage were passed through control P100 or iodinated High-Efficiency Particulate Air media, collected in plastic bags, incubated for 0-10 min, collected in an impinger containing thiosulphate to consume all unreacted iodine, plated and enumerated. Comparison of viable counts demonstrated antimicrobial activity with an apparent half-life for devitalization in tens of seconds; rate of kill decreased at low humidity and free iodine was captured by the bags. CONCLUSIONS: The results support the mechanism of near-contact capture earlier proposed; however, the disinfection chemistry in the aerosol phase is very slow on the time scale of inhalation. SIGNIFICANCE AND IMPACT OF THE STUDY: This study shows that disinfection by filter-bound iodine in the aerosol phase is too slow to be clinically significant in individual respiratory protection, but that it might be of benefit to limit airborne transmission of infections in enclosed areas.


Asunto(s)
Aerosoles/farmacología , Desinfección/métodos , Yodo/farmacología , Levivirus/efectos de los fármacos , Aerosoles/química , Microbiología del Aire , Desinfección/instrumentación , Semivida , Humedad , Yoduros/química , Yodo/química , Levivirus/crecimiento & desarrollo , Compuestos de Amonio Cuaternario/química
8.
J Water Health ; 13(1): 91-102, 2015 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-25719469

RESUMEN

Simple, low-cost household interventions are known to be effective in lowering the incidence of waterborne diseases in developing countries. However, high costs along with operational and maintenance issues have prevented the successful adoption of these interventions among the affected communities. To address these limitations, a cost-effective, gravity-driven water purification cartridge has been developed by employing the synergistic disinfection action of low concentrations of silver and chlorine on bacteria and viruses. The silver and chlorine treatment components within the cartridge have been developed using inexpensive materials and integrated with a life indicator and auto-shut-off-mechanism within a compact form factor. The antibacterial as well as antiviral performance of the cartridge was tested by using ground water spiked with Escherichia coli and MS2 bacteriophage. The results show that, although individually, the silver and chlorine treatment systems were unable to inactivate the test strains, the integrated cartridge inactivates both bacteria as well as viruses up to the log reduction requirement of the USEPA guide standard for microbiological water purifiers over its designated life of 2,000 liters.


Asunto(s)
Cloro , Desinfectantes , Filtración/instrumentación , Nanopartículas del Metal , Plata , Purificación del Agua/instrumentación , Cloro/análisis , Cloro/farmacología , Recuento de Colonia Microbiana , Países en Desarrollo , Desinfectantes/análisis , Desinfectantes/farmacología , Sinergismo Farmacológico , Escherichia coli/efectos de los fármacos , Escherichia coli/crecimiento & desarrollo , Composición Familiar , Levivirus/efectos de los fármacos , Levivirus/crecimiento & desarrollo , Nanopartículas del Metal/análisis , Plata/análisis , Plata/farmacología
9.
Appl Environ Microbiol ; 80(9): 2796-803, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24561592

RESUMEN

Laboratory studies of virus aerosols have been criticized for generating airborne viruses from artificial nebulizer suspensions (e.g., cell culture media), which do not mimic the natural release of viruses (e.g., from human saliva). The objectives of this study were to determine the effect of human saliva on the infectivity and survival of airborne virus and to compare it with those of artificial saliva and cell culture medium. A stock of MS2 bacteriophage was diluted in one of three nebulizer suspensions, aerosolized, size selected (100 to 450 nm) using a differential mobility analyzer, and collected onto gelatin filters. Uranine was used as a particle tracer. The resulting particle size distribution was measured using a scanning mobility particle sizer. The amounts of infectious virus, total virus, and fluorescence in the collected samples were determined by infectivity assays, quantitative reverse transcription-PCR (RT-PCR), and spectrofluorometry, respectively. For all nebulizer suspensions, the virus content generally followed a particle volume distribution rather than a number distribution. The survival of airborne MS2 was independent of particle size but was strongly affected by the type of nebulizer suspension. Human saliva was found to be much less protective than cell culture medium (i.e., 3% tryptic soy broth) and artificial saliva. These results indicate the need for caution when extrapolating laboratory results, which often use artificial nebulizer suspensions. To better assess the risk of airborne transmission of viral diseases in real-life situations, the use of natural suspensions such as saliva or respiratory mucus is recommended.


Asunto(s)
Medios de Cultivo/química , Levivirus/crecimiento & desarrollo , Saliva Artificial/química , Saliva/virología , Aire/análisis , Microbiología del Aire , Humanos
10.
Anal Biochem ; 444: 22-4, 2014 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-24055749

RESUMEN

Plaque analysis allows the determination of phage titer and multiplicity of infection. Yet, this overnight assay provides only endpoint results, ignoring kinetic aspects. We introduce an alternative high-throughput and rapid method for kinetic analysis of lytic coliphage activity. Escherichia coli was infected with serial dilutions of MS2 coliphage, and bacterial growth was monitored using a multi-well plate reader providing within hours the equivalent data as obtained overnight. Additional information is yielded, including phage replication rate, progeny size per cycle, and viral propagation during bacterial growth. This method offers further insights into physicochemical mechanisms of lytic coliphage infection and temporal control. It also provides a virus-host interaction acumen.


Asunto(s)
Escherichia coli/virología , Ensayos Analíticos de Alto Rendimiento , Levivirus/fisiología , Escherichia coli/crecimiento & desarrollo , Cinética , Levivirus/crecimiento & desarrollo , Levivirus/patogenicidad , Factores de Tiempo
11.
Appl Environ Microbiol ; 79(11): 3455-67, 2013 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-23542618

RESUMEN

Viral disinfection kinetics have been studied in depth, but the molecular-level inactivation mechanisms are not understood. Consequently, it is difficult to predict the disinfection behavior of nonculturable viruses, even when related, culturable viruses are available. The objective of this work was to determine how small differences in the composition of the viral genome and proteins impact disinfection. To this end, we investigated the inactivation of three related bacteriophages (MS2, fr, and GA) by UV254, singlet oxygen ((1)O2), free chlorine (FC), and chlorine dioxide (ClO2). Genome damage was quantified by PCR, and protein damage was assessed by quantitative matrix-assisted laser desorption ionization (MALDI) mass spectrometry. ClO2 caused great variability in the inactivation kinetics between viruses and was the only treatment that did not induce genome damage. The inactivation kinetics were similar for all viruses when treated with disinfectants possessing a genome-damaging component (FC, (1)O2, and UV254). On the protein level, UV254 subtly damaged MS2 and fr capsid proteins, whereas GA's capsid remained intact. (1)O2 oxidized a methionine residue in MS2 but did not affect the other two viruses. In contrast, FC and ClO2 rapidly degraded the capsid proteins of all three viruses. Protein composition alone could not explain the observed degradation trends; instead, molecular dynamics simulations indicated that degradation is dictated by the solvent-accessible surface area of individual amino acids. Finally, despite the similarities of the three viruses investigated, their mode of inactivation by a single disinfectant varied. This explains why closely related viruses can exhibit drastically different inactivation kinetics.


Asunto(s)
Desinfección/métodos , Levivirus/crecimiento & desarrollo , Inactivación de Virus/efectos de los fármacos , Inactivación de Virus/efectos de la radiación , Cloro/farmacología , Compuestos de Cloro/farmacología , Genoma Viral/efectos de los fármacos , Genoma Viral/efectos de la radiación , Cinética , Levivirus/efectos de los fármacos , Levivirus/genética , Levivirus/efectos de la radiación , Simulación de Dinámica Molecular , Óxidos/farmacología , Oxígeno Singlete/farmacología , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Rayos Ultravioleta
12.
Environ Monit Assess ; 185(3): 2565-76, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-22763654

RESUMEN

Enteric viruses monitoring in surface waters requires the concentration of viruses before detection assays. The aim of this study was to evaluate different methods in terms of recovery efficiencies of bacteriophage PP7 of Pseudomonas aeruginosa, measured by real-time PCR, using it as a viral control process in water analysis. Different nucleic acid extraction methods (silica-guanidinium thiocyanate, a commercial kit (Qiagen Viral RNA Kit) and phenol-chloroform with alcohol precipitation) exhibited very low recovery efficiencies (0.08-4.18 %), being the most efficient the commercial kit used for subsequent experiments. To evaluate the efficiency of three concentration methods, PBS (as model for clean water) and water samples from rivers were seeded to reach high (HC, 10(6) pfu ml(-1)) and low concentrations (LC, 10(4) pfu ml(-1)) of PP7. Tangential ultrafiltration proved to be more efficient (50.36 ± 12.91, 17.21 ± 9.22 and 12.58 ± 2.35 % for HC in PBS and two river samples, respectively) than adsorption-elution with negatively charged membranes (1.00 ± 1.34, 2.79 ± 2.62 and 0.05 ± 0.08 % for HC in PBS and two river samples, respectively) and polyethylene glycol precipitation (15.95 ± 7.43, 4.01 ± 1.12 and 3.91 ± 0.54 %, for HC in PBS and two river samples, respectively), being 3.2-50.4 times more efficient than the others for PBS and 2.7-252 times for river samples. Efficiencies also depended on the initial virus concentration and aqueous matrixes composition. In consequence, the incorporation of an internal standard like PP7 along the process is useful as a control of the water concentration procedure, the nucleic acid extraction, the presence of inhibitors and the variability of the recovery among replicas, and for the calculation of the sample limit of detection. Thus, the use of a process control, as presented here, is crucial for the accurate quantification of viral contamination.


Asunto(s)
Monitoreo del Ambiente/métodos , Levivirus/crecimiento & desarrollo , Pseudomonas aeruginosa/virología , Ríos/microbiología , Microbiología del Agua , Adsorción , Levivirus/aislamiento & purificación , Límite de Detección , Pseudomonas aeruginosa/crecimiento & desarrollo , Ultrafiltración
13.
J Bacteriol ; 194(18): 5073-9, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22821966

RESUMEN

We have sequenced and characterized two R-plasmid-dependent single-stranded RNA bacteriophages (RPD ssRNA phages), C-1 and Hagl1. Phage C-1 requires a conjugative plasmid of the IncC group, while Hgal1 requires the IncH group. Both the adsorption rate constants and one-step growth curves are determined for both phages. We also empirically confirmed the lysis function of the predicted lysis genes. Genomic sequencing and phylogenetic analyses showed that both phages belong to the Levivirus group and are most closely related to another IncP-plasmid-dependent ssRNA phage, PRR1. Furthermore, our result strongly suggests that the stereotypical bauplans of genome organization found in Levivirus and Allolevivirus predate phage specialization for conjugative plasmids, suggesting that the utilization of conjugative plasmids for cell attachment and entry comprises independent evolutionary events for these two main clades of ssRNA phages. Our result is also consistent with findings of a previous study, making the Levivirus-like genome organization ancestral and the Allolevivirus-like genome derived. To obtain a deeper insight into the evolution of ssRNA phages, more phages specializing for various conjugative plasmids and infecting different bacterial species would be needed.


Asunto(s)
Bacteriófagos/genética , Evolución Biológica , Genoma Viral , Levivirus/genética , Factores R , ARN Viral/genética , Bacteriófagos/crecimiento & desarrollo , Análisis por Conglomerados , Levivirus/crecimiento & desarrollo , Datos de Secuencia Molecular , Filogenia , Análisis de Secuencia de ADN
14.
Appl Environ Microbiol ; 78(9): 3280-5, 2012 May.
Artículo en Inglés | MEDLINE | ID: mdl-22389376

RESUMEN

Effective sanitization is important in viral epizootic outbreaks to avoid further spread of the pathogen. This study examined thermal inactivation as a sanitizing treatment for manure inoculated with highly pathogenic avian influenza virus H7N1 and bacteriophages MS2 and 6. Rapid inactivation of highly pathogenic avian influenza virus H7N1 was achieved at both mesophilic (35°C) and thermophilic (45 and 55°C) temperatures. Similar inactivation rates were observed for bacteriophage 6, while bacteriophage MS2 proved too thermoresistant to be considered a valuable indicator organism for avian influenza virus during thermal treatments. Guidelines for treatment of litter in the event of emergency composting can be formulated based on the inactivation rates obtained in the study.


Asunto(s)
Bacteriófago phi 6/fisiología , Subtipo H7N1 del Virus de la Influenza A/fisiología , Levivirus/fisiología , Viabilidad Microbiana , Saneamiento/métodos , Microbiología del Suelo , Suelo , Bacteriófago phi 6/crecimiento & desarrollo , Subtipo H7N1 del Virus de la Influenza A/crecimiento & desarrollo , Levivirus/crecimiento & desarrollo , Estiércol/virología , Temperatura
15.
Lett Appl Microbiol ; 55(3): 182-8, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22690653

RESUMEN

AIMS: The ability to distinguish between viable and/or infectious micro-organisms and inactivated cells is extremely important for correctly performing microbial risk assessments. In this study, we evaluated whether propidium monoazide (PMA)-qPCR could distinguish between viable and nonviable bacteria and viruses. METHODS AND RESULTS: A PMA-qPCR combined assay was applied to viable and inactivated bacteria (Escherichia coli and Bacillus subtilis) and viruses (MS2 and murine norovirus [MNV]). PMA, a DNA-intercalating agent, in combination with PCR was better able to distinguish between viable and nonviable bacteria and viruses than conventional PCR. CONCLUSIONS: These results suggest that a combined PMA-qPCR assay can be used to measure the viability of bacterial cells and bacteriophage MS2, but not MNV. SIGNIFICANCE AND IMPACT OF THE STUDY: PMA-qPCR could potentially be used to measure the viability of some micro-organisms, including virus. However, a thorough evaluation should be performed prior to measuring the viability of micro-organisms by PMA-qPCR in a quantitative way.


Asunto(s)
Azidas/química , Sustancias Intercalantes/química , Viabilidad Microbiana , Reacción en Cadena de la Polimerasa/métodos , Propidio/análogos & derivados , Bacillus subtilis/crecimiento & desarrollo , Escherichia coli/crecimiento & desarrollo , Levivirus/crecimiento & desarrollo , Norovirus/crecimiento & desarrollo , Propidio/química
16.
Foodborne Pathog Dis ; 9(11): 974-9, 2012 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-23113725

RESUMEN

Human noroviruses (HNoV) have been implicated in gastrointestinal outbreaks associated with fresh produce, juices, and ready-to-eat foods. In order to determine the risk of HNoV transmission by contaminated blueberry juice, survival characteristics of cultivable HNoV surrogates (murine norovirus, MNV-1; feline calicivirus, FCV-F9; and bacteriophage MS2) in blueberry juice (pH = 2.77) after 0, 1, 2, 7, 14, and 21 days at refrigeration temperatures (4°C) were studied. High-pressure homogenization (HPH) was studied as a novel processing method for noroviral surrogate inactivation in blueberry juice. Blueberry juice or phosphate-buffered saline (PBS; pH 7.2 as control) was inoculated with each virus, stored over 21 days at 4°C or subjected to HPH, and plaque assayed. FCV-F9 (∼5 log(10) PFU/mL) was undetectable after 1 day in blueberry juice at 4°C. MNV-1 (∼4 log(10) PFU/ml) showed minimal reduction (1 log(10) PFU/mL) after 14 days, with greater reduction (1.95 log(10) PFU/mL; p < 0.05) after 21 days in blueberry juice at 4°C. Bacteriophage MS2 (∼6 log(10) PFU/mL) showed significant reduction (1.93 log(10) PFU/mL; p < 0.05) after 2 days and was undetectable after 7 days in blueberry juice at 4°C. FCV-F9 remained viable in PBS for up to 21 days (2.28 log(10) PFU/mL reduction), while MNV-1 and MS2 survived after 21 days (1.08 and 0.56 log(10) PFU/mL reduction, respectively). Intriguingly, FCV-F9 and bacteriophage MS2 showed reduction after minimal homogenization pressures in blueberry juice (pH = 2.77), possibly due to the combination of juice pH, juice components, and mechanical effects. MNV-1 in blueberry juice was only slightly reduced at 250 (0.33 log(10) PFU/mL) and 300 MPa (0.71 log(10) PFU/mL). Virus surrogate survival in blueberry juice at 4°C correlates well with the ease of HNoV transmission via juices. HPH for viral inactivation in juices is dependent on virus type, and higher homogenization pressures may be needed for MNV-1 inactivation.


Asunto(s)
Bebidas/virología , Arándanos Azules (Planta)/virología , Contaminación de Alimentos/prevención & control , Manipulación de Alimentos/métodos , Conservación de Alimentos/métodos , Norovirus/crecimiento & desarrollo , Animales , Calicivirus Felino/crecimiento & desarrollo , Gatos , Línea Celular , Frío , Seguridad de Productos para el Consumidor , Microbiología de Alimentos , Humanos , Levivirus/crecimiento & desarrollo , Ratones , Presión , Ensayo de Placa Viral , Inactivación de Virus
17.
Foodborne Pathog Dis ; 8(9): 1005-10, 2011 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-21457050

RESUMEN

Free chlorine as hypochlorite is recommended to decontaminate fecally contaminated surfaces to control human norovirus (NoV). We evaluated the efficacy of sodium hypochlorite to decontaminate GII.4 NoV and three surrogates of human NoVs, feline calicivirus (FCV), murine norovirus (MNV), and coliphage MS2, on a fecally soiled stainless steel surface. Reduction of infectivity of FCV, MNV, and MS2 was measured by plaque assay and the decline of genomic copy numbers of GII.4 NoV by reverse transcriptase-polymerase chain reaction. Sodium hypochlorite solution at 5000 ppm could inactivate FCV by 3 log(10) plaque forming units after approximately 1.9 minutes of contact time, but required longer exposure times of 3.2 and 4.5 minutes to reduce MNV and MS2 by 3 log(10), respectively. However, detection of viral RNA by reverse transcriptase-polymerase chain reaction assay may not be reliable to estimate the effectiveness of sodium hypochlorite against human NoV. Of three NoV surrogates, FCV is not the most resistant of the virus tested for inactivation by hypochlorite and thus is not the worst-case model for estimating NoV inactivation. Although the use of 5000 ppm of hypochlorite for fecally soiled surfaces is effective, it may require longer exposure times of ≥3 minutes to control NoVs. Surface precleaning before hypochlorite disinfection is recommended to initially reduce the fecal organic load for better virus inactivation and should be a part of the environmental hygiene response measures during an NoV outbreak or where NoV fecal contamination of environmental surfaces is likely or suspected to be present.


Asunto(s)
Antivirales/farmacología , Calicivirus Felino/efectos de los fármacos , Desinfectantes/farmacología , Heces/virología , Leviviridae/efectos de los fármacos , Norovirus/efectos de los fármacos , Hipoclorito de Sodio/farmacología , Calicivirus Felino/crecimiento & desarrollo , Calicivirus Felino/aislamiento & purificación , Calicivirus Felino/patogenicidad , Farmacorresistencia Viral , Microbiología Ambiental , Dosificación de Gen , Humanos , Cinética , Leviviridae/crecimiento & desarrollo , Leviviridae/aislamiento & purificación , Leviviridae/patogenicidad , Levivirus/efectos de los fármacos , Levivirus/crecimiento & desarrollo , Levivirus/aislamiento & purificación , Levivirus/patogenicidad , Norovirus/genética , Norovirus/aislamiento & purificación , Norovirus/patogenicidad , Concentración Osmolar , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Acero Inoxidable , Propiedades de Superficie , Ensayo de Placa Viral , Virología/métodos , Inactivación de Virus/efectos de los fármacos
18.
J Appl Microbiol ; 107(5): 1651-7, 2009 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-19457041

RESUMEN

AIMS: The survival of Escherichia coli, Salmonella enterica serovar Typhimurium, Enterococcus faecalis and coliphage MS2 was studied in stored, fresh and diluted (1 : 1) human urine at 15 and 30 degrees C. METHODS AND RESULTS: Survival rate was studied by the plate count method. All the organisms showed rapid inactivation in stored urine, but they survived better in diluted and fresh urine. The high pH level and temperature were the major factors found to influence the survival of the micro-organisms with the survival rate being higher at 15 degrees C than at 30 degrees C. CONCLUSIONS: The destruction of all micro-organisms in stored urine required <1 week at 30 degrees C. Thus, the storage of urine is a useful way to reduce the risk of contamination while using urine as a fertilizer. SIGNIFICANCE AND IMPACT OF THE STUDY: The urine fertilization is aimed for the developing countries and the high temperatures in these countries may hasten the destruction of micro-organisms in urine. On the contrary, a higher survival rate of these organisms in fresh and diluted urine is a public health concern because the dilution of urine with water is likely to happen during flushing.


Asunto(s)
Enterococcus faecalis/crecimiento & desarrollo , Escherichia coli/crecimiento & desarrollo , Levivirus/crecimiento & desarrollo , Salmonella enterica/crecimiento & desarrollo , Orina/microbiología , Recuento de Colonia Microbiana , Humanos , Concentración de Iones de Hidrógeno , Temperatura , Orina/virología
19.
J Food Prot ; 72(11): 2418-22, 2009 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-19903411

RESUMEN

Novel inactivation methods are needed to control the spread of foodborne viruses responsible for nonbacterial gastroenteritis worldwide. The advent of high-pressure homogenization combining high pressure, shear stress, and cavitation provides the opportunity to evaluate this technology for viral inactivation in fluid foods under continuous processing conditions. Our objective was to evaluate murine norovirus (MNV-1) and MS2 coliphage (single-stranded RNA) as human enteric virus surrogates for their susceptibility to a novel high-pressure homogenization process for application in commercial settings. Experiments were conducted in duplicate with MNV-1 and MS2 coliphage in phosphate-buffered saline, using homogenization pressures of 0, 100, 200, 250, and 300 MPa (the maximum achievable by the homogenizer), resulting in exposure temperatures of 24, 46, 63, 70, and 75 degrees C, respectively, for <2 s. Only homogenization pressures of 300 MPa at 75 degrees C showed inactivation of approximately 3 log PFU for MS2 from an initial approximately 6 log PFU. Also, MNV-1 showed inactivation of approximately 0.8 log PFU at 300 MPa. Further studies are warranted to validate this inactivation process, which can retain the sensory and nutritional value of fluid food and shows promise for application in industrial environments.


Asunto(s)
Contaminación de Alimentos/prevención & control , Presión Hidrostática , Levivirus/crecimiento & desarrollo , Norovirus/crecimiento & desarrollo , Inactivación de Virus , Animales , Recuento de Colonia Microbiana , Seguridad de Productos para el Consumidor , Enterovirus/crecimiento & desarrollo , Infecciones por Enterovirus/prevención & control , Contaminación de Alimentos/análisis , Manipulación de Alimentos/métodos , Microbiología de Alimentos , Conservación de Alimentos/métodos , Calor , Humanos , Ratones , Factores de Tiempo
20.
Appl Environ Microbiol ; 74(2): 477-84, 2008 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-18065626

RESUMEN

Human noroviruses (NoVs) are a significant cause of nonbacterial gastroenteritis worldwide, with contaminated drinking water a potential transmission route. The absence of a cell culture infectivity model for NoV necessitates the use of molecular methods and/or viral surrogate models amenable to cell culture to predict NoV inactivation. The NoV surrogates murine NoV (MNV), feline calicivirus (FCV), poliovirus (PV), and male-specific coliphage MS2, in conjunction with Norwalk virus (NV), were spiked into surface water samples (n = 9) and groundwater samples (n = 6). Viral persistence was monitored at 25 degrees C and 4 degrees C by periodically analyzing virus infectivity (for all surrogate viruses) and nucleic acid (NA) for all tested viruses. FCV infectivity reduction rates were significantly higher than those of the other surrogate viruses. Infectivity reduction rates were significantly higher than NA reduction rates at 25 degrees C (0.18 and 0.09 log(10)/day for FCV, 0.13 and 0.10 log(10)/day for PV, 0.12 and 0.06 log(10)/day for MS2, and 0.09 and 0.05 log(10)/day for MNV) but not significant at 4 degrees C. According to a multiple linear regression model, the NV NA reduction rates (0.04 +/- 0.01 log(10)/day) were not significantly different from the NA reduction rates of MS2 (0.05 +/- 0.03 log(10)/day) and MNV (0.04 +/- 0.03 log(10)/day) and were significantly different from those of FCV (0.08 +/- 0.03 log(10)/day) and PV (0.09 +/- 0.03 log(10)/day) at 25 degrees C. In conclusion, MNV shows great promise as a human NoV surrogate due to its genetic similarity and environmental stability. FCV was much less stable and thus questionable as an adequate surrogate for human NoVs in surface water and groundwater.


Asunto(s)
Calicivirus Felino/crecimiento & desarrollo , Agua Dulce/virología , Levivirus/crecimiento & desarrollo , Norovirus/crecimiento & desarrollo , Poliovirus/crecimiento & desarrollo , Animales , Calicivirus Felino/genética , Gatos , Línea Celular , Georgia , Humanos , Levivirus/genética , Modelos Lineales , Maryland , Ratones , Norovirus/genética , Ohio , Poliovirus/genética , ARN Viral/genética , ARN Viral/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Temperatura , Microbiología del Agua , Abastecimiento de Agua
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