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Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336(T)), a representative of the Roseobacter clade.
Buddruhs, Nora; Chertkov, Olga; Petersen, Jörn; Fiebig, Anne; Chen, Amy; Pati, Amrita; Ivanova, Natalia; Lapidus, Alla; Goodwin, Lynne A; Chain, Patrick; Detter, John C; Gronow, Sabine; Kyrpides, Nikos C; Woyke, Tanja; Göker, Markus; Brinkhoff, Thorsten; Klenk, Hans-Peter.
Afiliación
  • Buddruhs N; Leibniz-Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
  • Chertkov O; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Petersen J; Leibniz-Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
  • Fiebig A; Leibniz-Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
  • Chen A; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Pati A; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Ivanova N; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Lapidus A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russia ; Algorithmic Biology Lab, St. Petersburg Academic University, St.Petersburg, Russia.
  • Goodwin LA; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA ; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Chain P; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Detter JC; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA ; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Gronow S; Leibniz-Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
  • Kyrpides NC; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Woyke T; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Göker M; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Brinkhoff T; Institute for Chemistry and Biology of the Marine Environment (ICMB), Oldenburg, Germany.
  • Klenk HP; Leibniz-Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Stand Genomic Sci ; 9(1): 128-41, 2013 Oct 16.
Article en En | MEDLINE | ID: mdl-24501651
ABSTRACT
Leisingera methylohalidivorans Schaefer et al. 2002 emend. Vandecandelaere et al. 2008 is the type species of the genus Leisingera. The genus belongs to the Roseobacter clade (Rhodobacteraceae, Alphaproteobacteria), a widely distributed lineage in marine environments. Leisingera and particularly L. methylohalidivorans strain MB2(T) is of special interest due to its methylotrophy. Here we describe the complete genome sequence and annotation of this bacterium together with previously unreported aspects of its phenotype. The 4,650,996 bp long genome with its 4,515 protein-coding and 81 RNA genes consists of three replicons, a single chromosome and two extrachromosomal elements with sizes of 221 kb and 285 kb.
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Texto completo: 1 Bases de datos: MEDLINE Idioma: En Revista: Stand Genomic Sci Año: 2013 Tipo del documento: Article País de afiliación: Alemania

Texto completo: 1 Bases de datos: MEDLINE Idioma: En Revista: Stand Genomic Sci Año: 2013 Tipo del documento: Article País de afiliación: Alemania