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Comparative Genomics of Bacteriophage of the Genus Seuratvirus.
Sazinas, Pavelas; Redgwell, Tamsin; Rihtman, Branko; Grigonyte, Aurelija; Michniewski, Slawomir; Scanlan, David J; Hobman, Jon; Millard, Andrew.
Afiliación
  • Sazinas P; Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark.
  • Redgwell T; School of Life Sciences, University of Warwick, Coventry, United Kingdom.
  • Rihtman B; School of Life Sciences, University of Warwick, Coventry, United Kingdom.
  • Grigonyte A; Warwick Medical School, University of Warwick, Coventry, United Kingdom.
  • Michniewski S; Warwick Medical School, University of Warwick, Coventry, United Kingdom.
  • Scanlan DJ; School of Life Sciences, University of Warwick, Coventry, United Kingdom.
  • Hobman J; School of Biosciences, University of Nottingham, Sutton Bonington Campus, Sutton Bonington, United Kingdom.
  • Millard A; Department of Infection, Immunity and Inflammation, University of Leicester, United Kingdom.
Genome Biol Evol ; 10(1): 72-76, 2018 01 01.
Article en En | MEDLINE | ID: mdl-29272407
Despite being more abundant and having smaller genomes than their bacterial host, relatively few bacteriophages have had their genomes sequenced. Here, we isolated 14 bacteriophages from cattle slurry and performed de novo genome sequencing, assembly, and annotation. The commonly used marker genes polB and terL showed these bacteriophages to be closely related to members of the genus Seuratvirus. We performed a core-gene analysis using the 14 new and four closely related genomes. A total of 58 core genes were identified, the majority of which has no known function. These genes were used to construct a core-gene phylogeny, the results of which confirmed the new isolates to be part of the genus Seuratvirus and expanded the number of species within this genus to four. All bacteriophages within the genus contained the genes queCDE encoding enzymes involved in queuosine biosynthesis. We suggest these genes are carried as a mechanism to modify DNA in order to protect these bacteriophages against host endonucleases.
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Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Bacteriófagos / Bovinos / Genómica Límite: Animals Idioma: En Revista: Genome Biol Evol Asunto de la revista: BIOLOGIA / BIOLOGIA MOLECULAR Año: 2018 Tipo del documento: Article País de afiliación: Dinamarca

Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Bacteriófagos / Bovinos / Genómica Límite: Animals Idioma: En Revista: Genome Biol Evol Asunto de la revista: BIOLOGIA / BIOLOGIA MOLECULAR Año: 2018 Tipo del documento: Article País de afiliación: Dinamarca