Concordance rate between copy number variants detected using either high- or medium-density single nucleotide polymorphism genotype panels and the potential of imputing copy number variants from flanking high density single nucleotide polymorphism haplotypes in cattle.

Rafter, Pierce; Gormley, Isobel Claire; Parnell, Andrew C; Kearney, John Francis; Berry, Donagh P

Rafter, Pierce; Gormley, Isobel Claire; Parnell, Andrew C; Kearney, John Francis; Berry, Donagh P.

Afiliación

Rafter P; Animal & Grassland Research and Innovation Centre, Teagasc, Moorepark, Fermoy, Co. Cork, Ireland.
Gormley IC; UCD School of Mathematics and Statistics, University College Dublin, Belfield, Dublin 4, Ireland.
Parnell AC; UCD School of Mathematics and Statistics, University College Dublin, Belfield, Dublin 4, Ireland.
Kearney JF; UCD School of Mathematics and Statistics, University College Dublin, Belfield, Dublin 4, Ireland.
Berry DP; Hamilton Institute Maynooth University, Maynooth, Kildare, Ireland.

BMC Genomics ; 21(1): 205, 2020 Mar 04.

Article en En | MEDLINE | ID: mdl-32131735

Asunto(s)

Biología Computacional/métodos; Variaciones en el Número de Copia de ADN; Polimorfismo de Nucleótido Simple; Algoritmos; Alelos; Animales; Bovinos; Frecuencia de los Genes; Genotipo; Haplotipos

Palabras clave

Beagle; Bovine; CNV; FImpute; Imputation; PennCNV; QuantiSNP; SNP

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Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Biología Computacional / Polimorfismo de Nucleótido Simple / Variaciones en el Número de Copia de ADN Límite: Animals Idioma: En Revista: BMC Genomics Asunto de la revista: GENETICA Año: 2020 Tipo del documento: Article País de afiliación: Irlanda

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