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Natural Language Processing in Surgery: A Systematic Review and Meta-analysis.
Mellia, Joseph A; Basta, Marten N; Toyoda, Yoshiko; Othman, Sammy; Elfanagely, Omar; Morris, Martin P; Torre-Healy, Luke; Ungar, Lyle H; Fischer, John P.
Afiliación
  • Mellia JA; Division of Plastic Surgery, Department of Surgery, University of Pennsylvania. Philadelphia, PA.
  • Basta MN; Department of Plastic and Reconstructive Surgery, Brown University. Providence, RI.
  • Toyoda Y; Division of Plastic Surgery, Department of Surgery, University of Pennsylvania. Philadelphia, PA.
  • Othman S; Division of Plastic Surgery, Department of Surgery, University of Pennsylvania. Philadelphia, PA.
  • Elfanagely O; Division of Plastic Surgery, Department of Surgery, University of Pennsylvania. Philadelphia, PA.
  • Morris MP; Division of Plastic Surgery, Department of Surgery, University of Pennsylvania. Philadelphia, PA.
  • Torre-Healy L; Department of Biomedical Informatics, School of Medicine and College of Engineering and Applied Sciences, Stony Brook University. Stony Brook, NY.
  • Ungar LH; Penn NLP, Department of Computer and Information Science, University of Pennsylvania. Philadelphia, PA.
  • Fischer JP; Division of Plastic Surgery, Department of Surgery, University of Pennsylvania. Philadelphia, PA.
Ann Surg ; 273(5): 900-908, 2021 05 01.
Article en En | MEDLINE | ID: mdl-33074901
ABSTRACT

OBJECTIVE:

The aim of this study was to systematically assess the application and potential benefits of natural language processing (NLP) in surgical outcomes research. SUMMARY BACKGROUND DATA Widespread implementation of electronic health records (EHRs) has generated a massive patient data source. Traditional methods of data capture, such as billing codes and/or manual review of free-text narratives in EHRs, are highly labor-intensive, costly, subjective, and potentially prone to bias.

METHODS:

A literature search of PubMed, MEDLINE, Web of Science, and Embase identified all articles published starting in 2000 that used NLP models to assess perioperative surgical outcomes. Evaluation metrics of NLP systems were assessed by means of pooled analysis and meta-analysis. Qualitative synthesis was carried out to assess the results and risk of bias on outcomes.

RESULTS:

The present study included 29 articles, with over half (n = 15) published after 2018. The most common outcome identified using NLP was postoperative complications (n = 14). Compared to traditional non-NLP models, NLP models identified postoperative complications with higher sensitivity [0.92 (0.87-0.95) vs 0.58 (0.33-0.79), P < 0.001]. The specificities were comparable at 0.99 (0.96-1.00) and 0.98 (0.95-0.99), respectively. Using summary of likelihood ratio matrices, traditional non-NLP models have clinical utility for confirming documentation of outcomes/diagnoses, whereas NLP models may be reliably utilized for both confirming and ruling out documentation of outcomes/diagnoses.

CONCLUSIONS:

NLP usage to extract a range of surgical outcomes, particularly postoperative complications, is accelerating across disciplines and areas of clinical outcomes research. NLP and traditional non-NLP approaches demonstrate similar performance measures, but NLP is superior in ruling out documentation of surgical outcomes.
Asunto(s)

Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Procedimientos Quirúrgicos Operativos / Algoritmos / Procesamiento de Lenguaje Natural / Narración / Registros Electrónicos de Salud Tipo de estudio: Guideline / Prognostic_studies / Qualitative_research / Systematic_reviews Límite: Humans Idioma: En Revista: Ann Surg Año: 2021 Tipo del documento: Article País de afiliación: Panamá

Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Procedimientos Quirúrgicos Operativos / Algoritmos / Procesamiento de Lenguaje Natural / Narración / Registros Electrónicos de Salud Tipo de estudio: Guideline / Prognostic_studies / Qualitative_research / Systematic_reviews Límite: Humans Idioma: En Revista: Ann Surg Año: 2021 Tipo del documento: Article País de afiliación: Panamá