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Classification of imbalanced oral cancer image data from high-risk population.
Song, Bofan; Li, Shaobai; Sunny, Sumsum; Gurushanth, Keerthi; Mendonca, Pramila; Mukhia, Nirza; Patrick, Sanjana; Gurudath, Shubha; Raghavan, Subhashini; Tsusennaro, Imchen; Leivon, Shirley T; Kolur, Trupti; Shetty, Vivek; Bushan, Vidya; Ramesh, Rohan; Peterson, Tyler; Pillai, Vijay; Wilder-Smith, Petra; Sigamani, Alben; Suresh, Amritha; Kuriakose, Moni Abraham; Birur, Praveen; Liang, Rongguang.
Afiliación
  • Song B; The University of Arizona, Wyant College of Optical Sciences, Tucson, Arizona, United States.
  • Li S; The University of Arizona, Wyant College of Optical Sciences, Tucson, Arizona, United States.
  • Sunny S; Mazumdar Shaw Medical Centre, Bangalore, India.
  • Gurushanth K; KLE Society Institute of Dental Sciences, Bangalore, India.
  • Mendonca P; Mazumdar Shaw Medical Foundation, Bangalore, India.
  • Mukhia N; KLE Society Institute of Dental Sciences, Bangalore, India.
  • Patrick S; Biocon Foundation, Bangalore, India.
  • Gurudath S; KLE Society Institute of Dental Sciences, Bangalore, India.
  • Raghavan S; KLE Society Institute of Dental Sciences, Bangalore, India.
  • Tsusennaro I; Christian Institute of Health Sciences and Research, Dimapur, India.
  • Leivon ST; Christian Institute of Health Sciences and Research, Dimapur, India.
  • Kolur T; Mazumdar Shaw Medical Foundation, Bangalore, India.
  • Shetty V; Mazumdar Shaw Medical Foundation, Bangalore, India.
  • Bushan V; Mazumdar Shaw Medical Foundation, Bangalore, India.
  • Ramesh R; Christian Institute of Health Sciences and Research, Dimapur, India.
  • Peterson T; The University of Arizona, Wyant College of Optical Sciences, Tucson, Arizona, United States.
  • Pillai V; Mazumdar Shaw Medical Foundation, Bangalore, India.
  • Wilder-Smith P; University of California Beckman Laser Institute and Medical Clinic, Irvine, California, United States.
  • Sigamani A; Mazumdar Shaw Medical Foundation, Bangalore, India.
  • Suresh A; Mazumdar Shaw Medical Centre, Bangalore, India.
  • Kuriakose MA; Mazumdar Shaw Medical Foundation, Bangalore, India.
  • Birur P; Cochin Cancer Research Center, Kochi, India.
  • Liang R; KLE Society Institute of Dental Sciences, Bangalore, India.
J Biomed Opt ; 26(10)2021 10.
Article en En | MEDLINE | ID: mdl-34689442
ABSTRACT

SIGNIFICANCE:

Early detection of oral cancer is vital for high-risk patients, and machine learning-based automatic classification is ideal for disease screening. However, current datasets collected from high-risk populations are unbalanced and often have detrimental effects on the performance of classification.

AIM:

To reduce the class bias caused by data imbalance.

APPROACH:

We collected 3851 polarized white light cheek mucosa images using our customized oral cancer screening device. We use weight balancing, data augmentation, undersampling, focal loss, and ensemble methods to improve the neural network performance of oral cancer image classification with the imbalanced multi-class datasets captured from high-risk populations during oral cancer screening in low-resource settings.

RESULTS:

By applying both data-level and algorithm-level approaches to the deep learning training process, the performance of the minority classes, which were difficult to distinguish at the beginning, has been improved. The accuracy of "premalignancy" class is also increased, which is ideal for screening applications.

CONCLUSIONS:

Experimental results show that the class bias induced by imbalanced oral cancer image datasets could be reduced using both data- and algorithm-level methods. Our study may provide an important basis for helping understand the influence of unbalanced datasets on oral cancer deep learning classifiers and how to mitigate.
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Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Neoplasias de la Boca / Redes Neurales de la Computación Tipo de estudio: Diagnostic_studies / Etiology_studies / Risk_factors_studies / Screening_studies Límite: Humans Idioma: En Revista: J Biomed Opt Asunto de la revista: ENGENHARIA BIOMEDICA / OFTALMOLOGIA Año: 2021 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Neoplasias de la Boca / Redes Neurales de la Computación Tipo de estudio: Diagnostic_studies / Etiology_studies / Risk_factors_studies / Screening_studies Límite: Humans Idioma: En Revista: J Biomed Opt Asunto de la revista: ENGENHARIA BIOMEDICA / OFTALMOLOGIA Año: 2021 Tipo del documento: Article País de afiliación: Estados Unidos