From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools.

Wright, Robyn J; Comeau, Andrè M; Langille, Morgan G I

Wright, Robyn J; Comeau, Andrè M; Langille, Morgan G I.

Afiliación

Wright RJ; Department of Pharmacology, Faculty of Medicine, Dalhousie University, Halifax, Canada.
Comeau AM; Integrated Microbiome Resource (IMR), Dalhousie University, Halifax, Canada.
Langille MGI; Department of Pharmacology, Faculty of Medicine, Dalhousie University, Halifax, Canada.

Microb Genom ; 9(3)2023 03.

Article en En | MEDLINE | ID: mdl-36867161

Asunto(s)

Metagenoma; Microbiota; Humanos; Bases de Datos Factuales; Metagenómica

Palabras clave

metagenome bioinformatic methodology; metagenome taxonomic classification; microbiome; microbiome database; taxonomic classifiers; tool performance

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Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Metagenoma / Microbiota Tipo de estudio: Prognostic_studies Límite: Humans Idioma: En Revista: Microb Genom Año: 2023 Tipo del documento: Article País de afiliación: Canadá

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