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Proc Natl Acad Sci U S A ; 119(15): e2112892119, 2022 04 12.
Artigo em Inglês | MEDLINE | ID: mdl-35412853

RESUMO

During early Drosophila embryogenesis, a network of gene regulatory interactions orchestrates terminal patterning, playing a critical role in the subsequent formation of the gut. We utilized CRISPR gene editing at endogenous loci to create live reporters of transcription and light-sheet microscopy to monitor the individual components of the posterior gut patterning network across 90 min prior to gastrulation. We developed a computational approach for fusing imaging datasets of the individual components into a common multivariable trajectory. Data fusion revealed low intrinsic dimensionality of posterior patterning and cell fate specification in wild-type embryos. The simple structure that we uncovered allowed us to construct a model of interactions within the posterior patterning regulatory network and make testable predictions about its dynamics at the protein level. The presented data fusion strategy is a step toward establishing a unified framework that would explore how stochastic spatiotemporal signals give rise to highly reproducible morphogenetic outcomes.


Assuntos
Padronização Corporal , Proteínas de Drosophila , Drosophila melanogaster , Endoderma , Redes Reguladoras de Genes , Animais , Padronização Corporal/genética , Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Drosophila melanogaster/crescimento & desenvolvimento , Endoderma/crescimento & desenvolvimento , Regulação da Expressão Gênica no Desenvolvimento
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