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1.
J Exp Med ; 192(3): 313-24, 2000 Aug 07.
Artigo em Inglês | MEDLINE | ID: mdl-10934220

RESUMO

We report that stromal cell-derived factor (SDF)-1 has the remarkable capacity to induce sustained signaling through CXC chemokine receptor 4 (CXCR4). In contrast to other chemokines, such as monocyte chemotactic protein 1 (CC chemokine receptor 2 [CCR2]), macrophage inflammatory protein 1beta (CCR5), liver and activation-regulated chemokine (LARC [CCR6]), Epstein-Barr virus-induced molecule 1 ligand chemokine (ELC [CCR7]), and IP10 (CXCR3), SDF-1 stimulates the prolonged activation of protein kinase B and extracellular signal-regulated kinase (ERK)-2. Activation of protein kinase B is reversed by displacement of SDF-1 from CXCR4 or inhibition of phosphatidylinositol 3-kinase. Although increasing concentrations of SDF-1 enhance CXCR4 internalization, kinase activation is prolonged. In addition, restimulation yields >60% of initial protein kinase B activity, indicating that the remaining receptors are not desensitized. Furthermore, activation is prolonged by inhibiting SDF-1 degradation. The sustained activation of cell survival and mitogenic pathways may account for the unique role of SDF-1 and CXCR4 in embryogenesis and lymphopoiesis.


Assuntos
Quimiocinas CXC/metabolismo , Proteína Quinase 1 Ativada por Mitógeno/metabolismo , Proteínas Serina-Treonina Quinases , Proteínas Proto-Oncogênicas/metabolismo , Receptores CXCR4/metabolismo , Transdução de Sinais , Linfócitos T/metabolismo , Androstadienos/farmacologia , Animais , Células Cultivadas , Quimiocina CXCL12 , Quimiocinas CXC/antagonistas & inibidores , Quimiocinas CXC/farmacologia , Relação Dose-Resposta a Droga , Regulação para Baixo , Ativação Enzimática , Inibidores Enzimáticos/farmacologia , Humanos , Camundongos , Inibidores de Fosfoinositídeo-3 Quinase , Proteínas Proto-Oncogênicas c-akt , Linfócitos T/citologia , Fatores de Tempo , Wortmanina
2.
J Exp Med ; 192(4): 495-506, 2000 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-10952719

RESUMO

Leukocyte recruitment to target tissue is initiated by weak rolling attachments to vessel wall ligands followed by firm integrin-dependent arrest triggered by endothelial chemokines. We show here that immobilized chemokines can augment not only arrest but also earlier integrin-mediated capture (tethering) of lymphocytes on inflamed endothelium. Furthermore, when presented in juxtaposition to vascular cell adhesion molecule 1 (VCAM-1), the endothelial ligand for the integrin very late antigen 4 (VLA-4, alpha4beta1), chemokines rapidly augment reversible lymphocyte tethering and rolling adhesions on VCAM-1. Chemokines potentiate VLA-4 tethering within <0.1 s of contact through Gi protein signaling, the fastest inside-out integrin signaling events reported to date. Although VLA-4 affinity is not altered upon chemokine signaling, subsecond VLA-4 clustering at the leukocyte-substrate contact zone results in enhanced leukocyte avidity to VCAM-1. Endothelial chemokines thus regulate all steps in adhesive cascades that control leukocyte recruitment at specific vascular beds.


Assuntos
Adesão Celular/fisiologia , Endotélio Vascular/metabolismo , Integrinas/metabolismo , Leucócitos/metabolismo , Receptores de Retorno de Linfócitos/metabolismo , Molécula 1 de Adesão de Célula Vascular/metabolismo , Anticorpos Monoclonais , Movimento Celular/fisiologia , Células Cultivadas , Quimiocina CXCL12 , Quimiocinas CXC/metabolismo , Endotélio Vascular/citologia , Citometria de Fluxo , Humanos , Integrina alfa4beta1 , Microscopia Confocal , Microscopia de Vídeo , Transdução de Sinais , Linfócitos T/metabolismo , Acetato de Tetradecanoilforbol/farmacologia , Fator de Necrose Tumoral alfa/farmacologia , Molécula 1 de Adesão de Célula Vascular/genética
3.
Oncogene ; 12(11): 2425-35, 1996 Jun 06.
Artigo em Inglês | MEDLINE | ID: mdl-8649784

RESUMO

Activation of transcription factor NF-kappaB involves signal-induced degradation of the protein inhibitor IkappaB-alpha and release of NF-kappaB which translocates to the nucleus where it influences transcription of responsive genes. Although multiple regions of IkappaB-alpha are involved in this process, the N-terminal region of the protein has been identified as a regulatory region that is required for signal induced phosphorylation and degradation. The sensitivity of IkappaB-alpha degradation to peptide aldehydes which inhibit components of the proteasome and the detection of ubiquitinated forms of IkappaB-alpha indicate that IkappaB-alpha is degraded by the ubiquitin-proteasome pathway. To identify lysine residues that represent the sites of ubiquitin addition, a series of lysine to arginine mutations were introduced into IkappaB-alpha and the mutant proteins tested for their ability to function in vivo. Exposure of COS7 cells, cotransfected with IkappaB-alpha and a TNF-responsive NF-kappaB reporter gene, resulted in stimulation of reporter activity as a consequence of IkappaB-alpha degradation. In contrast, this effect was drastically reduced when an IkappaKB-alpha mutant carrying serine to alanine changes at amino-acids, 32 and 36, which blocks both signal-induced phosphorylation and ubiquitin conjugation of the protein, was co-transfected with the reporter gene. Likewise, a mutant form of IkappaB-alpha containing lysine to arginine changes at positions 21 and 22 (K21R, K22R) severely reduces TNF-induced activation of the NF-kappaB-dependent reporter gene. Examination of the metabolism of mutant IkappaB-alpha molecules reveals that, while the K21R, K22R mutant inhibits the DNA-binding activity of NF-kappaB and undergoes signal induced phosphorylation, it is neither ubiquitinated nor degraded in response to TNF. Thus, it is likely that after signal-induced phosphorylation Of IkappaB-alpha on serine residues 32 and 36, lysine residues 21 and 22 are major sites of ubiquitin ligation which target the protein for rapid degradation by the proteasome.


Assuntos
Proteínas de Ligação a DNA/metabolismo , Proteínas I-kappa B , Lisina/metabolismo , NF-kappa B/metabolismo , Transcrição Gênica , Ubiquitinas/metabolismo , Sequência de Aminoácidos , Animais , Linhagem Celular , DNA/metabolismo , Proteínas de Ligação a DNA/genética , Éteres Cíclicos/farmacologia , Genes Reporter , Interleucina-1/farmacologia , Lisina/química , Lisina/genética , Dados de Sequência Molecular , Mutagênese , Inibidor de NF-kappaB alfa , NF-kappa B/antagonistas & inibidores , Ácido Okadáico , Fosforilação , Transdução de Sinais/efeitos dos fármacos , Fator de Transcrição RelA , Fator de Necrose Tumoral alfa/farmacologia
4.
J Mol Biol ; 279(5): 1163-75, 1998 Jun 26.
Artigo em Inglês | MEDLINE | ID: mdl-9642092

RESUMO

Proteins of the annexin family constitute very attractive models because of their four approximately 70 residue domains, D1 to D4, exhibiting an identical topology comprising five helix segments with only a limited sequence homology of approximately 30%. We focus on the isolated D2 domain, which is only partially folded. A detailed analysis of this equilibrium partially folded state in aqueous solution and micellar solution using 15N-1H multidimensional NMR is presented. Comparison of the residual structure of the entire domain with that of shorter fragments indicates the presence of long-range transient hydrophobic interactions that slightly stabilize the secondary structure elements. The unfolded domain tends to behave as a four-helix, rather than as a five-helix domain. The ensemble of residual structures comprises: (i) a set of native structures consisting of three regions with large helix populations, in rather sharp correspondence with A, B and E helices, and a small helix population in the second part of the C helix; (ii) a set of non-native local structures corresponding to turn-like structures stabilized by several side-chain to side-chain interactions and helix-disruptive side-chains to backbone interactions. Remarkably, residues involved in these local non-native interactions are also involved, in the native structure, in structurally important non-local interactions. During the folding process of annexin I, the local non-native interactions have to switch to native long-range interactions. This structural switch reveals the existence of a sequence-encoded regulation of the folding pathways and kinetics, and emphasizes the key role of the non-native local structures in this regulation.


Assuntos
Anexina A1/química , Fragmentos de Peptídeos/química , Dobramento de Proteína , Escherichia coli/química , Espectroscopia de Ressonância Magnética , Micelas , Politetrafluoretileno/farmacologia , Conformação Proteica/efeitos dos fármacos
5.
Mol Immunol ; 28(4-5): 523-31, 1991.
Artigo em Inglês | MEDLINE | ID: mdl-2062325

RESUMO

Recent studies have shown that the antigenic determinant recognized by a monoclonal antibody (mAb 164-2) elicited against the beta 2 subunit of E. coli tryptophan synthase is localized between residues 276 and 297 of this protein. In order to delineate more precisely the epitope recognized by this antibody, peptides ranging in length from 11 to 29 amino acids and belonging to this region were synthesized, and their interactions with the antibody are described in this paper. The smallest peptide recognized with a high affinity by antibody 164-2 contains 11 residues (273-283). This peptide is recognized by antibody 164-2 with an affinity (KD = 7.5 x 10(-9) M) very close to that of the native beta 2 subunit, suggesting a high structural similarity of the epitope inside the protein and in the isolated peptide. The corresponding sequence of beta 2 is located in a region protruding from the protein surface that contains a beta-turn as unique element of secondary structure in the crystallographic model. The absence of interaction between antibody 164-2 and the octapeptide lacking the three residues at the C-terminal end of peptide 11 suggests that the beta-turn is important in the recognition by the antibody. Kinetic studies were performed to find out whether or not the binding of the antibody to the peptide involves any conformational adaptation. The dissociation equilibrium constant (KD), the dissociation rate constant (koff) and the association rate constant (kon) were measured for eight peptide/antibody complexes. The values obtained were compatible with a one-step reaction, suggesting that no important conformational adaptation is involved in the formation of the peptide/antibody complexes. Furthermore, it has been shown that differences in affinity of antibody 164-2 for the various peptides were mainly due to differences in the dissociation rate constants (koff) and not in the association rate constants (kon). The exceptional location of the epitope in the native protein and the unusually high affinity of the 11-residue peptide for mAb 164-2, makes this peptide a good model for studying the interaction between an antibody and a continuous epitope of a protein.


Assuntos
Reações Antígeno-Anticorpo , Triptofano Sintase/imunologia , Sequência de Aminoácidos , Anticorpos Monoclonais/imunologia , Afinidade de Anticorpos , Dicroísmo Circular , Escherichia coli/enzimologia , Escherichia coli/imunologia , Dados de Sequência Molecular , Peptídeos/síntese química , Peptídeos/química , Peptídeos/imunologia , Conformação Proteica
6.
Protein Sci ; 7(7): 1506-15, 1998 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-9684882

RESUMO

The conformational properties of an 18 residues peptide spanning the entire sequence, L1KTPA5QFDAD10ELRAA15MKG, of the first helix (A-helix) of domain 2 of annexin I, were thoroughly investigated. This fragment exhibits several singular features, and in particular, two successive potential capping boxes, T3xxQ6 and D8xxE11. The former corresponds to the native hydrogen bond network stabilizing the alpha helix N-terminus in the protein; the latter is a non-native capping box able to break the helix at residue D8, and is observed in the domain 2 partially folded state. Using 2D-NMR techniques, we showed that two main populations of conformers coexist in aqueous solution. The first corresponds to a single helix extending from T3 to K17. The second corresponds to a broken helix at residue Ds. Four mutants, T3A, F7A, D8A, and E11A, were designed to further analyze the role of key amino acids in the equilibrium between the two ensembles of conformers. The sensitivity of NMR parameters to account for the variations in the populations of conformers was evaluated for each peptide. Our data show the delta13Calpha chemical shift to be the most relevant parameter. We used it to estimate the population ratio in the various peptides between the two main ensembles of conformers, the full helix and the broken helix. For the WT, E11A, and F7A peptides, these ratios are respectively 35/65, 60/40, 60/40. Our results were compared to the data obtained from helix/coil transition algorithms.


Assuntos
Anexina A1/química , Fragmentos de Peptídeos/química , Dobramento de Proteína , Estrutura Secundária de Proteína , Algoritmos , Sequência de Aminoácidos , Substituição de Aminoácidos , Ligação de Hidrogênio , Espectroscopia de Ressonância Magnética , Dados de Sequência Molecular , Fragmentos de Peptídeos/síntese química , Desnaturação Proteica , Solubilidade , Relação Estrutura-Atividade , Termodinâmica
7.
FEBS Lett ; 426(2): 271-8, 1998 Apr 17.
Artigo em Inglês | MEDLINE | ID: mdl-9599023

RESUMO

CXCR4 is the receptor for the CXC chemokine SDF1 that has essential functions on embryo organogenesis, immunological functions and T lymphocyte trafficking. Recently, CXCR4 has drawn unexpected attention as it was recently identified as a co-factor required for entry of lymphotropic HIV isolates in CD4+ T lymphocytes. CXCR4 is the only SDF1 receptor identified so far. This suggests that CXCR4 expression is critical for the biological effects of SDF1. To investigate the mechanisms controlling both the constitutive and induced expression of CXCR4 receptors we have isolated and characterized the promoter region and determined the genomic structure of the human gene. The CXCR4 gene contains two exons separated by an intronic sequence. A 2.6 kb 5'-flanking region located upstream the CXCR4 open reading frame contains a TATA box and the transcription start site characteristic of a functional promoter. This region also contains putative consensus binding sequences for different transcription factors, some of them associated with the hemopoiesis and lymphocyte development.


Assuntos
Receptores CXCR4/genética , Sequência de Bases , Éxons , Expressão Gênica/efeitos dos fármacos , Genes , Células HeLa , Humanos , Íntrons , Ionomicina/farmacologia , Dados de Sequência Molecular , Regiões Promotoras Genéticas , RNA Mensageiro/genética , Acetato de Tetradecanoilforbol/farmacologia , Transcrição Gênica , Transfecção
8.
Eur Cytokine Netw ; 11(3): 470-7, 2000 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-11022134

RESUMO

Chemokine receptors are not only able to bind chemokines but, together with CD4, they serve as an entry door for the human immunodeficiency virus type 1 (HIV-1). The signalling capacity of chemokine receptors, which is of fundamental importance for chemokine-induced chemotaxis, is not used by HIV-1 to enter a target cell, nor by chemokines or chemokine-derived ligands to inhibit viral entry. In addition, an ill-defined signal triggered by chemokines can, under some circumstances, lead to an increase in HIV-1 expression. We show here that, in infected cells, exposure to SDF-1 leads to an increased expression of a X4 strain of HIV-1. A similar increase can be induced by an N-terminal peptide of SDF-1 which had previously been shown to elicit an intracellular calcium response and to inhibit the entry of X4 strains of HIV-1. We demonstrate the involvement of extracellular signal-regulated kinases (ERK) in this phenomenon. SDF-1 activates ERK-1 and ERK-2 in Jurkat cells. In HeLa cells, ERK-2 only is activated by SDF-1 or by a SDF-derived peptide. This ERK activation can be blocked by pertussis toxin and by the MEK inhibitor U0126. Most importantly, SDF-1-dependent HIV-1 expression is abolished by pretreating the cells with pertussis toxin or with U0126. The consequences of this SDF-1-induced, ERK-dependent modulation of HIV-1 expression in infected cells may have a clinical relevance for eradicating latent viruses.


Assuntos
Fármacos Anti-HIV/farmacologia , Quimiocinas CXC/farmacologia , HIV-1/fisiologia , Proteínas Quinases Ativadas por Mitógeno/metabolismo , Replicação Viral/efeitos dos fármacos , Butadienos/farmacologia , Antígenos CD4/genética , Antígenos CD4/fisiologia , Cálcio/metabolismo , Ciclo Celular , Quimiocina CXCL12 , Ativação Enzimática , Inibidores Enzimáticos/farmacologia , Repetição Terminal Longa de HIV/genética , HIV-1/efeitos dos fármacos , HIV-1/genética , Células HeLa , Humanos , Células Jurkat , Nitrilas/farmacologia , Fragmentos de Peptídeos/farmacologia , Receptores CXCR4/fisiologia , Transcrição Gênica , Transfecção
9.
Int J Pept Protein Res ; 40(1): 7-12, 1992 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-1385347

RESUMO

A novel version of Multiple Antigenic Peptide (MAP) is described. This approach consists of the synthesis of a properly functionalized antigen carrier and the incorporation, on request, of one or more activated antigenic peptides. This method was to synthesize a MAP containing eight epitopes of Hsp 70-1 from Plasmodium falciparum. Mice immunised with this MAP gave a specific response while those immunised with the peptide alone did not.


Assuntos
Antígenos/química , Peptídeos/síntese química , Sequência de Aminoácidos , Animais , Anticorpos Antiprotozoários/imunologia , Antígenos/administração & dosagem , Antígenos/imunologia , Antígenos de Protozoários/imunologia , Cisteína/análogos & derivados , Cisteína/síntese química , Epitopos/imunologia , Feminino , Proteínas de Choque Térmico/imunologia , Imunização , Lisina , Camundongos , Camundongos Endogâmicos BALB C , Dados de Sequência Molecular , Peptídeos/imunologia , Peptídeos/farmacologia , Plasmodium falciparum/imunologia
10.
Infect Immun ; 57(12): 3856-62, 1989 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-2509372

RESUMO

Two peptides representing separate 13-amino-acid sequences of staphylococcal alpha-toxin have been synthesized and acrylamide gel-purified alpha-toxin monomer and hexamer forms have been prepared and used to produce antisera in rabbits. We report here that each synthetic peptide, P-I and P-II, induces the formation of a specific precipitating antiserum. Moreover, these sera also react with the toxin monomer and sometimes with the hexamer, indicating that each peptide has more than one epitope. The purified toxin monomer can induce antibodies to fragments of toxin but is significantly less potent than the hexamer in inducing antibodies to the toxin monomer and almost not effective in inducing a response to the toxin hexamer. The purified toxin hexamer induces responses that are almost the reciprocals of the monomers, with the antihexamer and -monomer responses dominating and almost no responses to fragments of toxin being induced. These responses are interpreted in terms of the stability of the toxin hexamer to proteolytic degradation, compared with the relative sensitivity of the monomer to proteases. In assays of toxin-neutralization activity, only those sera containing antihexamer antibodies can block toxin hemolytic activity. This is true for both peptide- and toxin-induced antisera. The basis for this apparent association between toxin-neutralizing potency and antihexamer reactivity is being studied. Peptide P-I contains the uniquely reactive tyrosine residue and may be involved in monomer-to-monomer associations required to form hexamers. Peptide P-II is near the carboxyl terminus of alpha-toxin and may be involved in the binding of toxin to membranes. In a study of the ability of each peptide to inhibit the rate of hexamer formation induced by membrane lipoprotein, peptide P-I (as expected) proves to be more efficient than peptide P-II. Finally, one rabbit immunized with the toxin hexamer produces antibodies to peptides P-I and P-II. This finding suggests that the two synthetic peptides selected for study are relevant to the in vivo immunoprocessing of staphylococcal alpha-toxin.


Assuntos
Antitoxinas/imunologia , Toxinas Bacterianas/imunologia , Proteínas Hemolisinas , Staphylococcus aureus/imunologia , Sequência de Aminoácidos , Especificidade de Anticorpos , Bioensaio , Western Blotting , Imunodifusão , Dados de Sequência Molecular , Oligopeptídeos/imunologia
11.
Int J Pept Protein Res ; 39(2): 117-22, 1992 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-1517011

RESUMO

The solution conformation of a synthetic 18 amino acid peptide derived from a consensus sequence of Annexins has been investigated by 1H NMR. Full sequential assignment has been achieved. Conformational properties of the peptide were deduced from the analysis of J(NH-CH alpha) coupling constants, amide proton exchange, 2D NOESY connectivities and computer modeling.


Assuntos
Proteínas de Ligação ao Cálcio/química , Peptídeos/química , Sequência de Aminoácidos , Espectroscopia de Ressonância Magnética , Dados de Sequência Molecular , Peptídeos/síntese química , Conformação Proteica , Temperatura
12.
Eur J Biochem ; 201(3): 681-93, 1991 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-1718750

RESUMO

Two synthetic peptides from the beta 2 subunit of tryptophan synthase have been studied by 1H-NMR spectroscopy at 300 MHz. One peptide, His-Gly-Arg-Val-Gly-Ile-Tyr-Phe-Gly-Met-Lys (peptide 11; Ile, isoleucine) is antigenic and binds with a high affinity to a monoclonal antibody that recognizes the native beta 2 subunit. The second peptide, His-Gly-Arg-Val-Gly-Ile-Tyr-Phe (peptide 8) reacts very weakly with the antibody. The 1H-NMR spectra of the two peptides have been assigned from two-dimensional techniques in H2O, 2H2O and (2H6) dimethyl sulfoxide [(2H6)Me2SO]. The structure has been evaluated through analysis of nuclear Overhauser effects, coupling constants, amide-proton exchange rates and their temperature coefficients, and chemical shifts. In aqueous solvent, the C-terminal part of peptide 11 presents some structure centered around residues Phe-Gly-Met. The relationship between the structure found in peptide 11 and its antigenic nature is discussed.


Assuntos
Triptofano Sintase/química , Triptofano Sintase/imunologia , Sequência de Aminoácidos , Epitopos/química , Espectroscopia de Ressonância Magnética/métodos , Dados de Sequência Molecular , Fragmentos de Peptídeos/imunologia , Conformação Proteica , Prótons , Solventes , Termodinâmica
13.
Biochemistry ; 35(47): 14717-24, 1996 Nov 26.
Artigo em Inglês | MEDLINE | ID: mdl-8942632

RESUMO

Conformational studies of the synthesized N-terminal cytoplasmic domain of the canine Sec61 gamma protein, an essential protein from the translocation pore of secretory proteins across the endoplasmic reticulum membrane, were performed using two-dimensional proton NMR spectroscopy. This canine domain is one of the smallest domains within the homologous protein family and may thus constitute the minimal functional structure. The peptide was solubilized in pure aqueous solution or in the presence of dodecylphosphocholine micelles mimicking a membrane-solution interface. In pure aqueous solution, the peptide is remarkably unfolded. Forming a stable complex with dodecylphosphocholine micelles, it acquires a well-defined alpha-helix-loop-alpha-helix secondary structure, with the helix, highly amphipathic, lying at the micelle surface. The loop comprising four residues is delimited by two flanking helix-capping structures, highly conserved in the whole homologous protein family. No tertiary structure, which could have been revealed by interhelix NOE contacts, was observed. From these experimental results and using general arguments based on sequence information and knowledge of peptide-membrane interactions, a structure of the entire Sec61 gamma protein in membrane bilayers is proposed.


Assuntos
Retículo Endoplasmático/metabolismo , Proteínas de Membrana/química , Conformação Proteica , Sequência de Aminoácidos , Animais , Transporte Biológico , Citoplasma , Cães , Humanos , Membranas Intracelulares/metabolismo , Espectroscopia de Ressonância Magnética , Proteínas de Membrana/metabolismo , Micelas , Modelos Moleculares , Dados de Sequência Molecular , Fosforilcolina/análogos & derivados , Canais de Translocação SEC , Homologia de Sequência de Aminoácidos , Soluções , Água
14.
Parasite Immunol ; 22(11): 535-43, 2000 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-11116433

RESUMO

The Pf72/Hsp70-1 antigen is a major target in the naturally acquired immunity against Plasmodium falciparum malaria. We carried out an extensive analysis of the responses to several epitopes on the least conserved C-terminal domain, according to the mode of sensitization: malaria infection or immunization with different immunogens. We found significant differences in the panel of B-cell epitopes recognized by animal models including primates, and by humans sensitized by natural infection. We focused the analysis on one epitope that is unique to Plasmodium species. It is specifically recognized by a monoclonal antibody that mediates the killing of infected hepatocytes in vitro. We produced a polymeric multiple antigenic peptide (MAP) form of this sequence, which enabled us to identify a new B-cell epitope not detected by ELISA with linear peptides. The polymer was strongly recognized by sera from monkeys or humans sensitized by natural infection, whereas the monomer was not. We modelled the three-dimensional structure of the Pf72/Hsp70-1 sequence, using known Escherischia coli DnaK structures as a template. This predicted that the corresponding region would form a loop in the native antigen. The results presented here suggest that the MAP strategy is also particularly useful as a means of obtaining suitable synthetic models for conformation-dependent epitopes.


Assuntos
Antígenos de Protozoários/imunologia , Epitopos de Linfócito B/imunologia , Proteínas de Choque Térmico/imunologia , Malária Falciparum/imunologia , Peptídeos/imunologia , Plasmodium falciparum/imunologia , Sequência de Aminoácidos , Animais , Anticorpos Antiprotozoários/sangue , Anticorpos Antiprotozoários/imunologia , Antígenos de Protozoários/química , Antígenos de Protozoários/genética , Epitopos de Linfócito B/química , Proteínas de Choque Térmico/química , Humanos , Imunização , Malária Falciparum/parasitologia , Camundongos , Camundongos Endogâmicos BALB C , Mimetismo Molecular , Dados de Sequência Molecular , Peptídeos/síntese química , Peptídeos/química , Peptídeos/genética , Proteínas Recombinantes/genética , Proteínas Recombinantes/imunologia , Saimiri
15.
J Biol Chem ; 276(11): 8288-96, 2001 Mar 16.
Artigo em Inglês | MEDLINE | ID: mdl-11087743

RESUMO

The binding of chemokines to glycosaminoglycans is thought to play a crucial role in chemokine functions. It has recently been shown that stromal cell-derived factor-1alpha (SDF-1alpha), a CXC chemokine with potent anti-human immunodeficiency virus activity, binds to heparan sulfate through a typical consensus sequence for heparin recognition (BBXB, where B is a basic residue KHLK, amino acids 24-27). Calculation of the accessible surface, together with the electrostatic potential of the SDF-1alpha dimer, revealed that other amino acids (Arg-41 and Lys-43) are found in the same surface area and contribute to the creation of a positively charged crevice, located at the dimer interface. GRID calculations confirmed that this binding site will be the most energetically favored area for the interaction with sulfate groups. Site-directed mutagenesis and surface plasmon resonance-based binding assays were used to investigate the structural basis for SDF-1alpha binding to heparin. Among the residues clustered in this basic surface area, Lys-24 and Lys-27 have dominant roles and are essential for interaction with heparin. Amino acids Arg-41 and Lys-43 participate in the binding but are not strictly required for the interaction to take place. Direct binding assays and competition analysis with monoclonal antibodies also permitted us to show that the N-terminal residue (Lys-1), an amino acid critical for receptor activation, is involved in complex formation. Binding studies with selectively desulfated heparin, heparin oligosaccharides, and heparitinase-resistant heparan sulfate fragments showed that a minimum size of 12-14 monosaccharide units is required for efficient binding and that 2-O- and N-sulfate groups have a dominant role in the interaction. Finally, the heparin-binding site was identified on the crystal structure of SDF-1alpha, and a docking study was undertaken. During the energy minimization process, heparin lost its perfect ribbon shape and fitted the protein surface perfectly. In the model, Lys-1, Lys-24, Lys-27, and Arg-41 were found to have the major role in binding a polysaccharide fragment consisting of 13 monosaccharide units.


Assuntos
Quimiocinas CXC/química , Heparina/metabolismo , Sítios de Ligação , Quimiocina CXCL12 , Dimerização , Modelos Moleculares , Receptores CXCR4/química
16.
Biochemistry ; 31(9): 2576-82, 1992 Mar 10.
Artigo em Inglês | MEDLINE | ID: mdl-1547240

RESUMO

The conformational change of the model peptide Ac-K-G-R-G-D-G-amide induced by a phospholipidic interface was investigated by proton nuclear magnetic resonance (1H NMR). In aqueous solution, the free peptide is highly flexible and disordered, even in the presence of deuterated dodecyl-phosphocholine (DPC-d38) micelles which mimic a membrane interface. The lipopeptide, obtained by grafting a lipid anchor [2,3-dipalmitoyl-D-(+)-glyceric acid] to the lysine side chain of the peptide, was studied by standard 2D 1H NMR spectroscopy combined with distance geometry and simulated annealing calculations. When anchored to a micelle interface, the peptide acquires a definite turn (II/I') conformation. We were also able to describe precisely the conformation of the diacylglyceric fragment of the lipopeptide in a lipid environment and to establish the average orientation of the peptide segment with respect to the micelle surface.


Assuntos
Ácidos Glicéricos/química , Lipoproteínas/química , Espectroscopia de Ressonância Magnética , Micelas , Oligopeptídeos/química , Palmitatos/química , Fosfolipídeos , Sequência de Aminoácidos , Fenômenos Químicos , Físico-Química , Deutério , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Oligopeptídeos/síntese química , Fosforilcolina/análogos & derivados , Conformação Proteica , Soluções
17.
Biochemistry ; 32(28): 7244-54, 1993 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-8393708

RESUMO

A 32 residue peptide, Ac-AQWDADELRAAMKGLGTDEDTLIELASRTNK, spanning the first helix-loop-helix motif of the second repeat of human annexin I, was synthesized and studied by standard 2D proton NMR and molecular modeling. The peptide was solubilized either in aqueous solution, in TFE-H2O mixtures or in aqueous phospholipidic micellar solution. In pure aqueous solution, elements of helix secondary structure were observed. Addition of TFE led to a dramatic cooperative effect on the secondary structure with a very low transition midpoint indicative of the strong tendency of the peptide to form alpha helices. Only in the aqueous micellar solution was the full helix-loop-helix motif obtained, showing again the potency of a membrane-like micellar environment to initiate peptide secondary structures and even elements of tertiary structure. There were sufficient NMR data to perform molecular modeling of the structure of the annexin fragment solubilized in the presence of micelles. However, this structure showed a relatively high degree of flexibility, especially around the T17-D18 hinge at the end of the loop.


Assuntos
Anexina A1/química , Micelas , Fragmentos de Peptídeos/química , Fosfolipídeos/química , Sequência de Aminoácidos , Humanos , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Dados de Sequência Molecular , Conformação Proteica , Prótons , Soluções , Solventes , Água
18.
Res Immunol ; 149(2): 127-37, 1998 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-9628394

RESUMO

The conformation of a synthetic undecapeptide derived from the Escherichia coli tryptophan synthase beta2 subunit was studied by NMR spectroscopy when bound to a monoclonal antibody (mAb 164-2) Fab' fragment directed against the native protein. The peptide 1(H-G-R-V-G-I-Y-F-G-M-K)11, peptide 11, was recognized by the antibody and its corresponding Fab' fragments with high affinity (K(D) = 1.1+/-0.2* 10(-8) M). Peptide 11 was labelled with 15N and its structure at the binding site of the Fab' 164-2 fragment was studied by isotope-editing techniques. 1H-15N heteronuclear spectra indicated the presence of two Fab'-peptide 11 complexes with two different conformations in slow chemical exchange on the chemical shift time scale.


Assuntos
Anticorpos Monoclonais/imunologia , Complexo Antígeno-Anticorpo , Peptídeos/imunologia , Conformação Proteica , Animais , Escherichia coli/química , Fragmentos Fab das Imunoglobulinas/química , Fragmentos Fab das Imunoglobulinas/imunologia , Espectroscopia de Ressonância Magnética , Camundongos , Triptofano Sintase/química
19.
Biochemistry ; 34(39): 12820-9, 1995 Oct 03.
Artigo em Inglês | MEDLINE | ID: mdl-7548037

RESUMO

A 21-residue peptide, P1AQFD5ADELR10AAMKG15LGTDE20D, corresponding to the (helix A)-loop motif of the second repeat of human annexin I, was synthesized and studied by 2D proton NMR. The conformational properties of the peptide were characterized at different temperatures in pure aqueous solution and in a TFE/H2O (1:4 v/v) mixture. In pure aqueous solution, the peptide adopts a preferred conformation, comprising both elements of native and nonnative structures. A high alpha helix content is present in the DADELRA segment, which corresponds to an initiation site in the middle of the native alpha helix sequence. At the N-terminus flanking region, a particular nonnative folding is revealed by the J(NH-CH alpha) coupling constants and a set of unusual NOE connectivities which correspond to a helix interrupt at the first D residue. Addition of relatively small amount of TFE restores the native helix fold at the C-terminus but not at the N-terminus. On the contrary, the nonnative N-terminus structure is clearly stabilized by TFE. Our data indicate that this structure comprises (i) an Asp5-x-x-Glu8 N-terminal capping box, as recently named by Harper and Rose [Harper, E. T., & Rose, G. D. (1993) Biochemistry 32, 7605-7609], (ii) a (i,i + 3) Asp7-x-x-Arg10 salt bridge, and (iii) a hydrophobic cluster centered on Phe4 which mainly interacts with Leu9 but also with Ala2, Ala6, and Ala12 in a dynamic way. This structure is rather stable since it is still observed at 293 K in aqueous solution and 313 K in the presence of TFE. It constitutes a very potent initiation site of the alpha helix structure. This is, however, a nonnative structure involving highly conserved residues in the whole annexin family and thus may play an important role in the folding pathway as a transient "compacting helper".


Assuntos
Anexina A1/química , Dobramento de Proteína , Sequência de Aminoácidos , Humanos , Espectroscopia de Ressonância Magnética , Dados de Sequência Molecular , Conformação Proteica , Prótons , Solubilidade , Temperatura , Termodinâmica
20.
Eur J Neurosci ; 12(1): 117-25, 2000 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-10651866

RESUMO

CXCR4 is the Gi protein-linked seven-transmembrane receptor for the alpha chemokine stromal cell-derived factor 1 (SDF-1), a chemoattractant for lymphocytes. This receptor is highly conserved between human and rodent. CXCR4 is also a coreceptor for entry of human immunodeficiency virus (HIV) in T cells and is expressed in the CNS. To investigate how these CXCR4 ligands influence CNS development and/or function, we have examined the expression and signalling of this chemokine receptor in rat neurons and astrocytes in vitro. CXCR4 transcripts and protein are synthesized by both cell types and in E15 brain neuronal progenitors. In these progenitors, SDF-1, but not gp120 (the HIV glycoprotein), induced activation of extracellular signal regulated kinases (ERKs) 1/2 and a dose-dependent chemotactic response. This chemotaxis was inhibited by Pertussis toxin, which uncouples Gi proteins and the bicyclam AMD3100, a highly selective CXCR4 antagonist, as well as by an inhibitor of the MAP kinase pathway. In differentiated neurons, both SDF-1 and the glycoprotein of HIV, gp120, triggered activation of ERKs with similar kinetics. These effects were significantly inhibited by Pertussis toxin and the CXCR4 antagonist. Rat astrocytes also responded to SDF-1 signalling by phosphorylation of ERKs but, in contrast to cortical neurons, no kinase activation was induced by gp120. Thus neurons and astrocytes can respond differently to signalling by SDF-1 and/or gp120. As SDF-1 triggers directed migration of neuronal progenitors, this alpha chemokine may play a role in cortex development. In differentiated neurons, both natural and viral ligands of CXCR4 activate ERKs and may therefore influence neuronal function.


Assuntos
Astrócitos/fisiologia , Quimiocinas CXC/fisiologia , Proteína gp120 do Envelope de HIV/farmacologia , Neurônios/fisiologia , Receptores CXCR4/fisiologia , Animais , Astrócitos/citologia , Células Cultivadas , Córtex Cerebral/fisiologia , Quimiocina CXCL12 , Quimiocinas CXC/genética , Quimiocinas CXC/farmacologia , Quimiotaxia , Embrião de Mamíferos , Substâncias de Crescimento/fisiologia , Humanos , Proteínas Quinases Ativadas por Mitógeno/metabolismo , Neurônios/citologia , Células PC12 , Ratos , Ratos Sprague-Dawley , Receptores CXCR4/efeitos dos fármacos , Receptores CXCR4/genética , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Transdução de Sinais , Células-Tronco/citologia , Células-Tronco/fisiologia , Transcrição Gênica
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