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1.
Eur J Nucl Med Mol Imaging ; 51(7): 1937-1954, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38326655

RESUMO

PURPOSE: Total metabolic tumor volume (TMTV) segmentation has significant value enabling quantitative imaging biomarkers for lymphoma management. In this work, we tackle the challenging task of automated tumor delineation in lymphoma from PET/CT scans using a cascaded approach. METHODS: Our study included 1418 2-[18F]FDG PET/CT scans from four different centers. The dataset was divided into 900 scans for development/validation/testing phases and 518 for multi-center external testing. The former consisted of 450 lymphoma, lung cancer, and melanoma scans, along with 450 negative scans, while the latter consisted of lymphoma patients from different centers with diffuse large B cell, primary mediastinal large B cell, and classic Hodgkin lymphoma cases. Our approach involves resampling PET/CT images into different voxel sizes in the first step, followed by training multi-resolution 3D U-Nets on each resampled dataset using a fivefold cross-validation scheme. The models trained on different data splits were ensemble. After applying soft voting to the predicted masks, in the second step, we input the probability-averaged predictions, along with the input imaging data, into another 3D U-Net. Models were trained with semi-supervised loss. We additionally considered the effectiveness of using test time augmentation (TTA) to improve the segmentation performance after training. In addition to quantitative analysis including Dice score (DSC) and TMTV comparisons, the qualitative evaluation was also conducted by nuclear medicine physicians. RESULTS: Our cascaded soft-voting guided approach resulted in performance with an average DSC of 0.68 ± 0.12 for the internal test data from developmental dataset, and an average DSC of 0.66 ± 0.18 on the multi-site external data (n = 518), significantly outperforming (p < 0.001) state-of-the-art (SOTA) approaches including nnU-Net and SWIN UNETR. While TTA yielded enhanced performance gains for some of the comparator methods, its impact on our cascaded approach was found to be negligible (DSC: 0.66 ± 0.16). Our approach reliably quantified TMTV, with a correlation of 0.89 with the ground truth (p < 0.001). Furthermore, in terms of visual assessment, concordance between quantitative evaluations and clinician feedback was observed in the majority of cases. The average relative error (ARE) and the absolute error (AE) in TMTV prediction on external multi-centric dataset were ARE = 0.43 ± 0.54 and AE = 157.32 ± 378.12 (mL) for all the external test data (n = 518), and ARE = 0.30 ± 0.22 and AE = 82.05 ± 99.78 (mL) when the 10% outliers (n = 53) were excluded. CONCLUSION: TMTV-Net demonstrates strong performance and generalizability in TMTV segmentation across multi-site external datasets, encompassing various lymphoma subtypes. A negligible reduction of 2% in overall performance during testing on external data highlights robust model generalizability across different centers and cancer types, likely attributable to its training with resampled inputs. Our model is publicly available, allowing easy multi-site evaluation and generalizability analysis on datasets from different institutions.


Assuntos
Processamento de Imagem Assistida por Computador , Linfoma , Tomografia por Emissão de Pósitrons combinada à Tomografia Computadorizada , Carga Tumoral , Humanos , Tomografia por Emissão de Pósitrons combinada à Tomografia Computadorizada/métodos , Linfoma/diagnóstico por imagem , Processamento de Imagem Assistida por Computador/métodos , Fluordesoxiglucose F18 , Automação , Masculino , Feminino
2.
Stat Med ; 40(5): 1243-1261, 2021 02 28.
Artigo em Inglês | MEDLINE | ID: mdl-33336451

RESUMO

Quantitative imaging biomarkers (QIB) are extracted from medical images in radiomics for a variety of purposes including noninvasive disease detection, cancer monitoring, and precision medicine. The existing methods for QIB extraction tend to be ad hoc and not reproducible. In this article, a general and flexible statistical approach is proposed for handling up to three-dimensional medical images and reasonably capturing features with respect to specific spatial patterns. In particular, a model-based spatial process decomposition is developed where the random weights are unique to individual patients for component functions common across patients. Model fitting and selection are based on maximum likelihood, while feature extractions are via optimal prediction of the underlying true image. Simulation studies are conducted to investigate the properties of the proposed methodology. For illustration, a cancer image data set is analyzed and QIBs are extracted in association with a clinical endpoint.


Assuntos
Neoplasias , Biomarcadores , Humanos , Imageamento Tridimensional , Neoplasias/diagnóstico por imagem , Medicina de Precisão
3.
Radiology ; 286(2): 676-684, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-28925823

RESUMO

Purpose To develop and evaluate the feasibility of deep learning approaches for magnetic resonance (MR) imaging-based attenuation correction (AC) (termed deep MRAC) in brain positron emission tomography (PET)/MR imaging. Materials and Methods A PET/MR imaging AC pipeline was built by using a deep learning approach to generate pseudo computed tomographic (CT) scans from MR images. A deep convolutional auto-encoder network was trained to identify air, bone, and soft tissue in volumetric head MR images coregistered to CT data for training. A set of 30 retrospective three-dimensional T1-weighted head images was used to train the model, which was then evaluated in 10 patients by comparing the generated pseudo CT scan to an acquired CT scan. A prospective study was carried out for utilizing simultaneous PET/MR imaging for five subjects by using the proposed approach. Analysis of covariance and paired-sample t tests were used for statistical analysis to compare PET reconstruction error with deep MRAC and two existing MR imaging-based AC approaches with CT-based AC. Results Deep MRAC provides an accurate pseudo CT scan with a mean Dice coefficient of 0.971 ± 0.005 for air, 0.936 ± 0.011 for soft tissue, and 0.803 ± 0.021 for bone. Furthermore, deep MRAC provides good PET results, with average errors of less than 1% in most brain regions. Significantly lower PET reconstruction errors were realized with deep MRAC (-0.7% ± 1.1) compared with Dixon-based soft-tissue and air segmentation (-5.8% ± 3.1) and anatomic CT-based template registration (-4.8% ± 2.2). Conclusion The authors developed an automated approach that allows generation of discrete-valued pseudo CT scans (soft tissue, bone, and air) from a single high-spatial-resolution diagnostic-quality three-dimensional MR image and evaluated it in brain PET/MR imaging. This deep learning approach for MR imaging-based AC provided reduced PET reconstruction error relative to a CT-based standard within the brain compared with current MR imaging-based AC approaches. © RSNA, 2017 Online supplemental material is available for this article.


Assuntos
Encéfalo/anatomia & histologia , Imageamento por Ressonância Magnética/métodos , Tomografia por Emissão de Pósitrons/métodos , Adulto , Idoso , Idoso de 80 Anos ou mais , Ar , Osso e Ossos/anatomia & histologia , Tecido Conjuntivo/anatomia & histologia , Estudos de Viabilidade , Feminino , Humanos , Processamento de Imagem Assistida por Computador , Aprendizado de Máquina/normas , Masculino , Pessoa de Meia-Idade , Imagem Multimodal/métodos , Fótons , Estudos Prospectivos , Estudos Retrospectivos , Acidente Vascular Cerebral/patologia , Adulto Jovem
4.
Magn Reson Med ; 79(6): 2912-2922, 2018 06.
Artigo em Inglês | MEDLINE | ID: mdl-28971513

RESUMO

PURPOSE: In this study, we propose a rapid acquisition for MR-based attenuation correction (MRAC) in positron emission tomography (PET)/MR imaging, in which an ultrashort echo time (UTE) image and an out-of-phase echo image are obtained within a single rapid scan (35 s) at high spatial resolution (1 mm3 ), which allows accurate estimation of a pseudo CT image using 4-class tissue classification (discrete bone, discrete air, continuous fat, and continuous water). METHODS: In dual-echo ramped hybrid encoding (dRHE), a UTE echo is directly followed by a second out-of-phase echo, in which hybrid spatial encoding combining single-point imaging and 3-dimensional radial frequency encoding is used to improve the quality of both images. Two-point Dixon reconstruction is used to estimate fat- and water-separated images, and UTE images are used to estimate bone. Air and bone segmentation is improved by using multiple UTE images with an advanced hybrid-encoding scheme that allows reconstruction of multiple UTE images. To evaluate the proposed method, dRHE-MRAC PET/MR brain imaging was performed in 10 subjects. Dice coefficients and PET reconstruction errors relative to CT-based attenuation correction were compared with existing system MRAC approaches. RESULTS: In dRHE-MRAC, the Dice coefficients for soft tissue, air, and bone were respectively 0.95 ± 0.01, 0.62 ± 0.06, and 0.78 ± 0.05, which was a significantly improved result compared with existing approaches. In most brain regions, dRHE-MRAC showed significantly reduced PET error (less than 1%) with P values less than 0.05. CONCLUSIONS: Dual-echo ramped hybrid encoding enables rapid and robust imaging for MRAC with a very rapid acquisition. Magn Reson Med 79:2912-2922, 2018. © 2017 International Society for Magnetic Resonance in Medicine.


Assuntos
Encéfalo/diagnóstico por imagem , Imageamento por Ressonância Magnética , Tomografia por Emissão de Pósitrons , Tomografia Computadorizada por Raios X , Ar , Biomarcadores/metabolismo , Osso e Ossos/diagnóstico por imagem , Fluordesoxiglucose F18/química , Glucose/metabolismo , Humanos , Processamento de Imagem Assistida por Computador , Imagem Multimodal , Imagens de Fantasmas , Fótons , Prótons , Distribuição Tecidual
5.
J Imaging Inform Med ; 37(4): 1652-1663, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-38485899

RESUMO

Radiology narrative reports often describe characteristics of a patient's disease, including its location, size, and shape. Motivated by the recent success of multimodal learning, we hypothesized that this descriptive text could guide medical image analysis algorithms. We proposed a novel vision-language model, ConTEXTual Net, for the task of pneumothorax segmentation on chest radiographs. ConTEXTual Net extracts language features from physician-generated free-form radiology reports using a pre-trained language model. We then introduced cross-attention between the language features and the intermediate embeddings of an encoder-decoder convolutional neural network to enable language guidance for image analysis. ConTEXTual Net was trained on the CANDID-PTX dataset consisting of 3196 positive cases of pneumothorax with segmentation annotations from 6 different physicians as well as clinical radiology reports. Using cross-validation, ConTEXTual Net achieved a Dice score of 0.716±0.016, which was similar to the degree of inter-reader variability (0.712±0.044) computed on a subset of the data. It outperformed vision-only models (Swin UNETR: 0.670±0.015, ResNet50 U-Net: 0.677±0.015, GLoRIA: 0.686±0.014, and nnUNet 0.694±0.016) and a competing vision-language model (LAVT: 0.706±0.009). Ablation studies confirmed that it was the text information that led to the performance gains. Additionally, we show that certain augmentation methods degraded ConTEXTual Net's segmentation performance by breaking the image-text concordance. We also evaluated the effects of using different language models and activation functions in the cross-attention module, highlighting the efficacy of our chosen architectural design.


Assuntos
Redes Neurais de Computação , Pneumotórax , Humanos , Pneumotórax/diagnóstico por imagem , Algoritmos , Radiografia Torácica , Processamento de Linguagem Natural
6.
Phys Med Biol ; 69(12)2024 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-38776951

RESUMO

Objective.In this work, we present and evaluate a technique for performing interface measurements of beta particle-emitting radiopharmaceutical therapy agents in solution.Approach.Unlaminated EBT3 film was calibrated for absorbed dose to water using a NIST matched x-ray beam. Custom acrylic source phantoms were constructed and placed above interfaces comprised of bone, lung, and water-equivalent materials. The film was placed perpendicular to these interfaces and measurements for absorbed dose to water using solutions of90Y and177Lu were performed and compared to Monte Carlo absorbed dose to water estimates simulated with EGSnrc. Surface and depth dose profile measurements were also performed.Main results.Surface absorbed dose to water measurements agreed with predicted results within 3.6% for177Lu and 2.2% for90Y. The agreement between predicted and measured absorbed dose to water was better for90Y than177Lu for depth dose and interface profiles. In general, agreement withink= 1 uncertainty bounds was observed for both radionuclides and all interfaces. An exception to this was found for the bone-to-water interface for177Lu due to the increased sensitivity of the measurements to imperfections in the material surfaces.Significance. This work demonstrates the feasibility and limitations of using radiochromic film for performing absorbed dose to water measurements on beta particle-emitting radiopharmaceutical therapy agents across material interfaces.


Assuntos
Partículas beta , Método de Monte Carlo , Compostos Radiofarmacêuticos , Partículas beta/uso terapêutico , Compostos Radiofarmacêuticos/uso terapêutico , Compostos Radiofarmacêuticos/administração & dosagem , Radiometria/instrumentação , Radiometria/métodos , Imagens de Fantasmas , Água/química , Radioisótopos de Ítrio/uso terapêutico , Humanos
7.
Phys Med Biol ; 69(11)2024 May 23.
Artigo em Inglês | MEDLINE | ID: mdl-38684165

RESUMO

Objective. This work introduces a novel approach to performing active and passive dosimetry for beta-emitting radionuclides in solution using common dosimeters. The measurements are compared to absorbed dose to water (Dw) estimates from Monte Carlo (MC) simulations. We present a method for obtaining absorbed dose to water, measured with dosimeters, from beta-emitting radiopharmaceutical agents using a custom SPECT/CT compatible phantom for validation of Monte Carlo based absorbed dose to water estimates.Approach. A cylindrical, acrylic SPECT/CT compatible phantom capable of housing an IBA EFD diode, Exradin A20-375 parallel plate ion chamber, unlaminated EBT3 film, and thin TLD100 microcubes was constructed for the purpose of measuring absorbed dose to water from solutions of common beta-emitting radiopharmaceutical therapy agents. The phantom is equipped with removable detector inserts that allow for multiple configurations and is designed to be used for validation of image-based absorbed dose estimates with detector measurements. Two experiments with131I and one experiment with177Lu were conducted over extended measurement intervals with starting activities of approximately 150-350 MBq. Measurement data was compared to Monte Carlo simulations using the egs_chamber user code in EGSnrc 2019.Main results. Agreement withink= 1 uncertainty between measured and MC predictedDwwas observed for all dosimeters, except the A20-375 ion chamber during the second131I experiment. Despite the agreement, the measured values were generally lower than predicted values by 5%-15%. The uncertainties atk = 1 remain large (5%-30% depending on the dosimeter) relative to other forms of radiation therapy.Significance. Despite high uncertainties, the overall agreement between measured and simulated absorbed doses is promising for the use of dosimeter-based RPT measurements in the validation of MC predictedDw.


Assuntos
Partículas beta , Método de Monte Carlo , Imagens de Fantasmas , Radiometria , Compostos Radiofarmacêuticos , Tomografia Computadorizada com Tomografia Computadorizada de Emissão de Fóton Único , Tomografia Computadorizada com Tomografia Computadorizada de Emissão de Fóton Único/instrumentação , Radiometria/instrumentação , Partículas beta/uso terapêutico , Compostos Radiofarmacêuticos/uso terapêutico , Compostos Radiofarmacêuticos/química , Radioisótopos do Iodo/uso terapêutico , Lutécio/química , Água/química , Radioisótopos
8.
J Imaging Inform Med ; 37(2): 471-488, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38308070

RESUMO

Large language models (LLMs) have shown promise in accelerating radiology reporting by summarizing clinical findings into impressions. However, automatic impression generation for whole-body PET reports presents unique challenges and has received little attention. Our study aimed to evaluate whether LLMs can create clinically useful impressions for PET reporting. To this end, we fine-tuned twelve open-source language models on a corpus of 37,370 retrospective PET reports collected from our institution. All models were trained using the teacher-forcing algorithm, with the report findings and patient information as input and the original clinical impressions as reference. An extra input token encoded the reading physician's identity, allowing models to learn physician-specific reporting styles. To compare the performances of different models, we computed various automatic evaluation metrics and benchmarked them against physician preferences, ultimately selecting PEGASUS as the top LLM. To evaluate its clinical utility, three nuclear medicine physicians assessed the PEGASUS-generated impressions and original clinical impressions across 6 quality dimensions (3-point scales) and an overall utility score (5-point scale). Each physician reviewed 12 of their own reports and 12 reports from other physicians. When physicians assessed LLM impressions generated in their own style, 89% were considered clinically acceptable, with a mean utility score of 4.08/5. On average, physicians rated these personalized impressions as comparable in overall utility to the impressions dictated by other physicians (4.03, P = 0.41). In summary, our study demonstrated that personalized impressions generated by PEGASUS were clinically useful in most cases, highlighting its potential to expedite PET reporting by automatically drafting impressions.

9.
ArXiv ; 2024 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-38659641

RESUMO

Purpose: Automatic quantification of longitudinal changes in PET scans for lymphoma patients has proven challenging, as residual disease in interim-therapy scans is often subtle and difficult to detect. Our goal was to develop a longitudinally-aware segmentation network (LAS-Net) that can quantify serial PET/CT images for pediatric Hodgkin lymphoma patients. Materials and Methods: This retrospective study included baseline (PET1) and interim (PET2) PET/CT images from 297 patients enrolled in two Children's Oncology Group clinical trials (AHOD1331 and AHOD0831). LAS-Net incorporates longitudinal cross-attention, allowing relevant features from PET1 to inform the analysis of PET2. Model performance was evaluated using Dice coefficients for PET1 and detection F1 scores for PET2. Additionally, we extracted and compared quantitative PET metrics, including metabolic tumor volume (MTV) and total lesion glycolysis (TLG) in PET1, as well as qPET and ΔSUVmax in PET2, against physician measurements. We quantified their agreement using Spearman's ρ correlations and employed bootstrap resampling for statistical analysis. Results: LAS-Net detected residual lymphoma in PET2 with an F1 score of 0.606 (precision/recall: 0.615/0.600), outperforming all comparator methods (P<0.01). For baseline segmentation, LAS-Net achieved a mean Dice score of 0.772. In PET quantification, LAS-Net's measurements of qPET, ΔSUVmax, MTV and TLG were strongly correlated with physician measurements, with Spearman's ρ of 0.78, 0.80, 0.93 and 0.96, respectively. The quantification performance remained high, with a slight decrease, in an external testing cohort. Conclusion: LAS-Net demonstrated significant improvements in quantifying PET metrics across serial scans, highlighting the value of longitudinal awareness in evaluating multi-time-point imaging datasets.

10.
Int J Radiat Oncol Biol Phys ; 119(4): 1275-1284, 2024 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-38367914

RESUMO

PURPOSE: Targeted radiopharmaceutical therapy (RPT) in combination with external beam radiation therapy (EBRT) shows promise as a method to increase tumor control and mitigate potential high-grade toxicities associated with re-treatment for patients with recurrent head and neck cancer. This work establishes a patient-specific dosimetry framework that combines Monte Carlo-based dosimetry from the 2 radiation modalities at the voxel level using deformable image registration (DIR) and radiobiological constructs for patients enrolled in a phase 1 clinical trial combining EBRT and RPT. METHODS AND MATERIALS: Serial single-photon emission computed tomography (SPECT)/computed tomography (CT) patient scans were performed at approximately 24, 48, 72, and 168 hours postinjection of 577.2 MBq/m2 (15.6 mCi/m2) CLR 131, an iodine 131-containing RPT agent. Using RayStation, clinical EBRT treatment plans were created with a treatment planning CT (TPCT). SPECT/CT images were deformably registered to the TPCT using the Elastix DIR module in 3D Slicer software and assessed by measuring mean activity concentrations and absorbed doses. Monte Carlo EBRT dosimetry was computed using EGSnrc. RPT dosimetry was conducted using RAPID, a GEANT4-based RPT dosimetry platform. Radiobiological metrics (biologically effective dose and equivalent dose in 2-Gy fractions) were used to combine the 2 radiation modalities. RESULTS: The DIR method provided good agreement for the activity concentrations and calculated absorbed dose in the tumor volumes for the SPECT/CT and TPCT images, with a maximum mean absorbed dose difference of -11.2%. Based on the RPT absorbed dose calculations, 2 to 4 EBRT fractions were removed from patient EBRT treatments. For the combined treatment, the absorbed dose to target volumes ranged from 57.14 to 75.02 Gy. When partial volume corrections were included, the mean equivalent dose in 2-Gy fractions to the planning target volume from EBRT + RPT differed -3.11% to 1.40% compared with EBRT alone. CONCLUSIONS: This work demonstrates the clinical feasibility of performing combined EBRT + RPT dosimetry on TPCT scans. Dosimetry guides treatment decisions for EBRT, and this work provides a bridge for the same paradigm to be implemented within the rapidly emerging clinical RPT space.


Assuntos
Neoplasias de Cabeça e Pescoço , Radioisótopos do Iodo , Método de Monte Carlo , Compostos Radiofarmacêuticos , Planejamento da Radioterapia Assistida por Computador , Tomografia Computadorizada com Tomografia Computadorizada de Emissão de Fóton Único , Humanos , Neoplasias de Cabeça e Pescoço/radioterapia , Neoplasias de Cabeça e Pescoço/diagnóstico por imagem , Radioisótopos do Iodo/uso terapêutico , Radioisótopos do Iodo/administração & dosagem , Planejamento da Radioterapia Assistida por Computador/métodos , Compostos Radiofarmacêuticos/uso terapêutico , Dosagem Radioterapêutica , Radiometria/métodos
11.
Radiol Artif Intell ; 5(4): e220232, 2023 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-37529208

RESUMO

Artificial intelligence (AI) is being increasingly used to automate and improve technologies within the field of medical imaging. A critical step in the development of an AI algorithm is estimating its prediction error through cross-validation (CV). The use of CV can help prevent overoptimism in AI algorithms and can mitigate certain biases associated with hyperparameter tuning and algorithm selection. This article introduces the principles of CV and provides a practical guide on the use of CV for AI algorithm development in medical imaging. Different CV techniques are described, as well as their advantages and disadvantages under different scenarios. Common pitfalls in prediction error estimation and guidance on how to avoid them are also discussed. Keywords: Education, Research Design, Technical Aspects, Statistics, Supervised Learning, Convolutional Neural Network (CNN) Supplemental material is available for this article. © RSNA, 2023.

12.
Radiol Artif Intell ; 5(6): e220281, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-38074793

RESUMO

Purpose: To evaluate the impact of domain adaptation on the performance of language models in predicting five-point Deauville scores on the basis of clinical fluorine 18 fluorodeoxyglucose PET/CT reports. Materials and Methods: The authors retrospectively retrieved 4542 text reports and images for fluorodeoxyglucose PET/CT lymphoma examinations from 2008 to 2018 in the University of Wisconsin-Madison institutional clinical imaging database. Of these total reports, 1664 had Deauville scores that were extracted from the reports and served as training labels. The bidirectional encoder representations from transformers (BERT) model and initialized BERT models BioClinicalBERT, RadBERT, and RoBERTa were adapted to the nuclear medicine domain by pretraining using masked language modeling. These domain-adapted models were then compared with the non-domain-adapted versions on the task of five-point Deauville score prediction. The language models were compared against vision models, multimodal vision-language models, and a nuclear medicine physician, with sevenfold Monte Carlo cross-validation. Means and SDs for accuracy are reported, with P values from paired t testing. Results: Domain adaptation improved the performance of all language models (P = .01). For example, BERT improved from 61.3% ± 2.9 (SD) five-class accuracy to 65.7% ± 2.2 (P = .01) following domain adaptation. Domain-adapted RoBERTa (named DA RoBERTa) performed best, achieving 77.4% ± 3.4 five-class accuracy; this model performed similarly to its multimodal counterpart (named Multimodal DA RoBERTa) (77.2% ± 3.2) and outperformed the best vision-only model (48.1% ± 3.5, P ≤ .001). A physician given the task on a subset of the data had a five-class accuracy of 66%. Conclusion: Domain adaptation improved the performance of large language models in predicting Deauville scores in PET/CT reports.Keywords Lymphoma, PET, PET/CT, Transfer Learning, Unsupervised Learning, Convolutional Neural Network (CNN), Nuclear Medicine, Deauville, Natural Language Processing, Multimodal Learning, Artificial Intelligence, Machine Learning, Language Modeling Supplemental material is available for this article. © RSNA, 2023See also the commentary by Abajian in this issue.

13.
Comput Med Imaging Graph ; 107: 102227, 2023 07.
Artigo em Inglês | MEDLINE | ID: mdl-37167815

RESUMO

Generation of computed tomography (CT) images from magnetic resonance (MR) images using deep learning methods has recently demonstrated promise in improving MR-guided radiotherapy and PET/MR imaging. PURPOSE: To investigate the performance of unsupervised training using a large number of unpaired data sets as well as the potential gain in performance after fine-tuning with supervised training using spatially registered data sets in generation of synthetic computed tomography (sCT) from magnetic resonance (MR) images. MATERIALS AND METHODS: A cycleGAN method consisting of two generators (residual U-Net) and two discriminators (patchGAN) was used for unsupervised training. Unsupervised training utilized unpaired T1-weighted MR and CT images (2061 sets for each modality). Five supervised models were then fine-tuned starting with the generator of the unsupervised model for 1, 10, 25, 50, and 100 pairs of spatially registered MR and CT images. Four supervised training models were also trained from scratch for 10, 25, 50, and 100 pairs of spatially registered MR and CT images using only the residual U-Net generator. All models were evaluated on a holdout test set of spatially registered images from 253 patients, including 30 with significant pathology. sCT images were compared against the acquired CT images using mean absolute error (MAE), Dice coefficient, and structural similarity index (SSIM). sCT images from 60 test subjects generated by the unsupervised, and most accurate of the fine-tuned and supervised models were qualitatively evaluated by a radiologist. RESULTS: While unsupervised training produced realistic-appearing sCT images, addition of even one set of registered images improved quantitative metrics. Addition of more paired data sets to the training further improved image quality, with the best results obtained using the highest number of paired data sets (n=100). Supervised training was found to be superior to unsupervised training, while fine-tuned training showed no clear benefit over supervised learning, regardless of the training sample size. CONCLUSION: Supervised learning (using either fine tuning or full supervision) leads to significantly higher quantitative accuracy in the generation of sCT from MR images. However, fine-tuned training using both a large number of unpaired image sets was generally no better than supervised learning using registered image sets alone, suggesting the importance of well registered paired data set for training compared to a large set of unpaired data.


Assuntos
Processamento de Imagem Assistida por Computador , Radioterapia Guiada por Imagem , Humanos , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Tomografia Computadorizada por Raios X , Espectroscopia de Ressonância Magnética
14.
Biomed Phys Eng Express ; 9(4)2023 05 12.
Artigo em Inglês | MEDLINE | ID: mdl-37084718

RESUMO

Voxel-level dosimetry based on nuclear medicine images offers patient-specific personalization of radiopharmaceutical therapy (RPT) treatments. Clinical evidence is emerging demonstrating improvements in treatment precision in patients when voxel-level dosimetry is used compared to MIRD. Voxel-level dosimetry requires absolute quantification of activity concentrations in the patient, but images from SPECT/CT scanners are not quantitative and require calibration using nuclear medicine phantoms. While phantom studies can validate a scanner's ability to recover activity concentrations, these studies provide only a surrogate for the true metric of interest: absorbed doses. Measurements using thermoluminescent dosimeters (TLDs) are a versatile and accurate method of measuring absorbed dose. In this work, a TLD probe was manufactured that can fit into currently available nuclear medicine phantoms for the measurement of absorbed dose of RPT agents. Next, 748 MBq of I-131 was administered to a 16 ml hollow source sphere placed in a 6.4 L Jaszczak phantom in addition to six TLD probes, each holding 4 TLD-100 1 × 1 × 1 mm TLD-100 (LiF:Mg,Ti) microcubes. The phantom then underwent a SPECT/CT scan in accordance with a standard SPECT/CT imaging protocol for I-131. The SPECT/CT images were then input into a Monte Carlo based RPT dosimetry platform named RAPID and a three dimensional dose distribution in the phantom was estimated. Additionally, a GEANT4 benchmarking scenario (denoted 'idealized') was created using a stylized representation of the phantom. There was good agreement for all six probes, the differences between measurement and RAPID ranged between -5.5% and 0.9%. The difference between the measured and the idealized GEANT4 scenario was calculated and ranged from -4.3% and -20.5%. This work demonstrates good agreement between TLD measurements and RAPID. In addition, it introduces a novel TLD probe that can be easily introduced into clinical nuclear medicine workflows to provide QA of image-based dosimetry for RPT treatments.


Assuntos
Radioisótopos do Iodo , Compostos Radiofarmacêuticos , Humanos , Fluxo de Trabalho , Radiometria/métodos
15.
Front Chem ; 11: 1167783, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37179772

RESUMO

Introduction: 43Sc and 44gSc are both positron-emitting radioisotopes of scandium with suitable half-lives and favorable positron energies for clinical positron emission tomography (PET) imaging. Irradiation of isotopically enriched calcium targets has higher cross sections compared to titanium targets and higher radionuclidic purity and cross sections than natural calcium targets for reaction routes possible on small cyclotrons capable of accelerating protons and deuterons. Methods: In this work, we investigate the following production routes via proton and deuteron bombardment on CaCO3 and CaO target materials: 42Ca(d,n)43Sc, 43Ca(p,n)43Sc, 43Ca(d,n)44gSc, 44Ca(p,n)44gSc, and 44Ca(p,2n)43Sc. Radiochemical isolation of the produced radioscandium was performed with extraction chromatography using branched DGA resin and apparent molar activity was measured with the chelator DOTA. The imaging performance of 43Sc and 44gSc was compared with 18F, 68Ga, and 64Cu on two clinical PET/CT scanners. Discussion: The results of this work demonstrate that proton and deuteron bombardment of isotopically enriched CaO targets produce high yield and high radionuclidic purity 43Sc and 44gSc. Laboratory capabilities, circumstances, and budgets are likely to dictate which reaction route and radioisotope of scandium is chosen.

16.
ArXiv ; 2023 Oct 17.
Artigo em Inglês | MEDLINE | ID: mdl-37904738

RESUMO

Purpose: To determine if fine-tuned large language models (LLMs) can generate accurate, personalized impressions for whole-body PET reports. Materials and Methods: Twelve language models were trained on a corpus of PET reports using the teacher-forcing algorithm, with the report findings as input and the clinical impressions as reference. An extra input token encodes the reading physician's identity, allowing models to learn physician-specific reporting styles. Our corpus comprised 37,370 retrospective PET reports collected from our institution between 2010 and 2022. To identify the best LLM, 30 evaluation metrics were benchmarked against quality scores from two nuclear medicine (NM) physicians, with the most aligned metrics selecting the model for expert evaluation. In a subset of data, model-generated impressions and original clinical impressions were assessed by three NM physicians according to 6 quality dimensions (3-point scale) and an overall utility score (5-point scale). Each physician reviewed 12 of their own reports and 12 reports from other physicians. Bootstrap resampling was used for statistical analysis. Results: Of all evaluation metrics, domain-adapted BARTScore and PEGASUSScore showed the highest Spearman's ρ correlations (ρ=0.568 and 0.563) with physician preferences. Based on these metrics, the fine-tuned PEGASUS model was selected as the top LLM. When physicians reviewed PEGASUS-generated impressions in their own style, 89% were considered clinically acceptable, with a mean utility score of 4.08 out of 5. Physicians rated these personalized impressions as comparable in overall utility to the impressions dictated by other physicians (4.03, P=0.41). Conclusion: Personalized impressions generated by PEGASUS were clinically useful, highlighting its potential to expedite PET reporting.

17.
J Nucl Med ; 64(2): 188-196, 2023 02.
Artigo em Inglês | MEDLINE | ID: mdl-36522184

RESUMO

Trustworthiness is a core tenet of medicine. The patient-physician relationship is evolving from a dyad to a broader ecosystem of health care. With the emergence of artificial intelligence (AI) in medicine, the elements of trust must be revisited. We envision a road map for the establishment of trustworthy AI ecosystems in nuclear medicine. In this report, AI is contextualized in the history of technologic revolutions. Opportunities for AI applications in nuclear medicine related to diagnosis, therapy, and workflow efficiency, as well as emerging challenges and critical responsibilities, are discussed. Establishing and maintaining leadership in AI require a concerted effort to promote the rational and safe deployment of this innovative technology by engaging patients, nuclear medicine physicians, scientists, technologists, and referring providers, among other stakeholders, while protecting our patients and society. This strategic plan was prepared by the AI task force of the Society of Nuclear Medicine and Molecular Imaging.


Assuntos
Inteligência Artificial , Medicina Nuclear , Humanos , Ecossistema , Cintilografia , Imagem Molecular
18.
Med Phys ; 49(8): 5491-5503, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-35607296

RESUMO

PURPOSE: Approximately 50% of head and neck cancer (HNC) patients will experience loco-regional disease recurrence following initial courses of therapy. Retreatment with external beam radiotherapy (EBRT) is technically challenging and may be associated with a significant risk of irreversible damage to normal tissues. Radiopharmaceutical therapy (RPT) is a potential method to treat recurrent HNC in conjunction with EBRT. Phantoms are used to calibrate and add quantification to nuclear medicine images, and anthropomorphic phantoms can account for both the geometrical and material composition of the head and neck. In this study, we present the creation of an anthropomorphic, head and neck, nuclear medicine phantom, and its characterization for the validation of a Monte Carlo, SPECT image-based, 131 I RPT dosimetry workflow. METHODS: 3D-printing techniques were used to create the anthropomorphic phantom from a patient CT dataset. Three 131 I SPECT/CT imaging studies were performed using a homogeneous, Jaszczak, and an anthropomorphic phantom to quantify the SPECT images using a GE Optima NM/CT 640 with a high energy general purpose collimator. The impact of collimator detector response (CDR) modeling and volume-based partial volume corrections (PVCs) upon the absorbed dose was calculated using an image-based, Geant4 Monte Carlo RPT dosimetry workflow and compared against a ground truth scenario. Finally, uncertainties were quantified in accordance with recent EANM guidelines. RESULTS: The 3D-printed anthropomorphic phantom was an accurate re-creation of patient anatomy including bone. The extrapolated Jaszczak recovery coefficients were greater than that of the 3D-printed insert (∼22.8 ml) for both the CDR and non-CDR cases (with CDR: 0.536 vs. 0.493, non-CDR: 0.445 vs. 0.426, respectively). Utilizing Jaszczak phantom PVCs, the absorbed dose was underpredicted by 0.7% and 4.9% without and with CDR, respectively. Utilizing anthropomorphic phantom recovery coefficient overpredicted the absorbed dose by 3% both with and without CDR. All dosimetry scenarios that incorporated PVC were within the calculated uncertainty of the activity. The uncertainties in the cumulative activity ranged from 23.6% to 106.4% for Jaszczak spheres ranging in volume from 0.5 to 16 ml. CONCLUSION: The accuracy of Monte Carlo-based dosimetry for 131 I RPT in HNC was validated with an anthropomorphic phantom. In this study, it was found that Jaszczak-based PVCs were sufficient. Future applications of the phantom could involve 3D printing and characterizing patient-specific volumes for more personalized RPT dosimetry estimates.


Assuntos
Radiometria , Compostos Radiofarmacêuticos , Humanos , Radioisótopos do Iodo , Método de Monte Carlo , Imagens de Fantasmas , Impressão Tridimensional , Radiometria/métodos , Compostos Radiofarmacêuticos/uso terapêutico , Fluxo de Trabalho
19.
Med Phys ; 49(8): 5206-5215, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-35621727

RESUMO

PURPOSE: Simultaneous PET/MR imaging involves injection of a radiopharmaceutical and often also includes administration of a gadolinium-based contrast agent (GBCA). Phantom model studies indicate that attenuation of annihilation photons by GBCAs does not bias quantification metrics of PET radiopharmaceutical uptake. However, a direct comparison of attenuation-corrected PET values before and after administration of GBCA has not been performed in patients imaged with simultaneous dynamic PET/MR. The purpose of this study was to investigate the attenuating effect of GBCAs on standardized uptake value (SUV) quantification of 18 F-fluorodeoxyglucose (FDG) uptake in invasive breast cancer and normal tissues using simultaneous PET/MR. METHODS: The study included 13 women with newly diagnosed invasive breast cancer imaged using simultaneous dedicated prone breast PET/MR with FDG. PET data collection and two-point Dixon-based MR attenuation correction sequences began simultaneously before the administration of GBCA to avoid a potential impact of GBCA on the attenuation correction map. A standard clinical dose of GBCA was intravenously administered for the dynamic contrast enhanced MR sequences obtained during the simultaneous PET data acquisition. PET data were dynamically reconstructed into 60 frames of 30 s each. Three timing windows were chosen consisting of a single frame (30 s), two frames (60 s), or four frames (120 s) immediately before and after contrast administration. SUVmax and SUVmean of the biopsy-proven breast malignancy, fibroglandular tissue of the contralateral normal breast, descending aorta, and liver were calculated prior to and following GBCA administration. Percent change in the SUV metrics were calculated to test for a statistically significant, non-zero percent change using Wilcoxon signed-rank tests. RESULTS: No statistical change in SUVmax or SUVmean was found for the breast malignancies or normal anatomical regions during the timing windows before and after GBCA administration. CONCLUSIONS: GBCAs do not significantly impact the results of PET quantification by means of additional attenuation. However, GBCAs may still affect quantification by affecting MR acquisitions used for MR-based attenuation correction which this study did not address. Corrections to account for attenuation due to clinical concentrations of GBCAs are not necessary in simultaneous PET/MR examinations when MR-based attenuation correction sequences are performed prior to GBCA administration.


Assuntos
Neoplasias da Mama , Fluordesoxiglucose F18 , Neoplasias da Mama/diagnóstico por imagem , Meios de Contraste , Feminino , Gadolínio , Humanos , Imageamento por Ressonância Magnética/métodos , Imagem Multimodal/métodos , Tomografia por Emissão de Pósitrons/métodos , Compostos Radiofarmacêuticos
20.
Front Radiol ; 2: 895088, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-37492655

RESUMO

The gut microbiome profoundly influences brain structure and function. The gut microbiome is hypothesized to play a key role in the etiopathogenesis of neuropsychiatric and neurodegenerative illness; however, the contribution of an intact gut microbiome to quantitative neuroimaging parameters of brain microstructure and function remains unknown. Herein, we report the broad and significant influence of a functional gut microbiome on commonly employed neuroimaging measures of diffusion tensor imaging (DTI), neurite orientation dispersion and density (NODDI) imaging, and SV2A 18F-SynVesT-1 synaptic density PET imaging when compared to germ-free animals. In this pilot study, we demonstrate that mice, in the presence of a functional gut microbiome, possess higher neurite density and orientation dispersion and decreased synaptic density when compared to age- and sex-matched germ-free mice. Our results reveal the region-specific structural influences and synaptic changes in the brain arising from the presence of intestinal microbiota. Further, our study highlights important considerations for the development of quantitative neuroimaging biomarkers for precision imaging in neurologic and psychiatric illness.

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