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1.
Inorg Chem ; 62(40): 16627-16640, 2023 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-37747836

RESUMO

The structure of MOF3 (M = Nb, Ta) compounds was precisely modeled by combining powder X-ray diffraction, solid-state NMR spectroscopy, and semiempirical dispersion-corrected DFT calculations. It consists of stacked ∞(MOF3) layers along the c⃗ direction formed by heteroleptic corner-connected MX6 (X = O, F) octahedra. 19F NMR resonance assignments and occupancy rates of the anionic crystallographic sites have been revised. The bridging site is shared equally by the anions, and the terminal site is occupied by F only. An O/F correlated disorder is expected since cis-MO2F4 octahedra are favored, resulting in one-dimensional -F-M-O-M- strings along the <100> and <010> directions. Ten different 2 × 2 × 1 supercells per compound, fulfilling these characteristics, were built. Using DFT calculations and the GIPAW approach, the supercells were relaxed and the 19F isotropic chemical shift values were determined. The agreement between the experimental and calculated 19F spectra is excellent for TaOF3. The 1H and 19F experimental NMR spectra revealed that some of the bridging F atoms are substituted by OH groups, especially in NbOF3. New supercells involving OH groups were generated. Remarkably, the best agreement is obtained for the supercells with the composition closest to that estimated from the 19F NMR spectra, i.e., NbOF2.85(OH)0.15.

2.
J Chem Phys ; 156(13): 134501, 2022 Apr 07.
Artigo em Inglês | MEDLINE | ID: mdl-35395888

RESUMO

We study reactivity and leaching at the calcium sodium borosilicate (CNBS)-water interface by means of a Car-Parrinello ab initio molecular dynamics simulation over a simulation time of 100 ps. With an emphasis on the comparison between the behaviors of Ca2+ and Na+ cations at the CNBS glass-water interface, different mechanism events during the trajectory are revealed, discussed, and correlated with other density functional theory calculations. We show that Na+ ions can be released in solution, while Ca2+ cannot leave the surface of CNBS glass. This release is correlated with the vacancy energy of Ca2+ and Na+ cations. Here, we found that the CNBS structure with the Na+ cation vacancy is energetically more favorable than the structure with the Ca2+ cation vacancy. The calcium adsorption site has been shown to have a greater affinity for water than can be found in the case of the sodium site, demonstrating that affinity may not be considered a major factor controlling the release of cations from the glass to the solution.

3.
Solid State Nucl Magn Reson ; 105: 101638, 2020 02.
Artigo em Inglês | MEDLINE | ID: mdl-31810014

RESUMO

We present the study of the phosphorus local environment by using 31P MAS NMR in a series of seven double monophosphates MIIMIV(PO4)2 (MII and MIV being divalent and tetravalent cations, respectively) of yavapaiite and low-yavapaiite type crystal structures. Solid-state and cluster DFT calculations were found to be efficient for predicting the 31P isotropic chemical shift and chemical shift anisotropy. To achieve this performance, however, a proper computational optimisation of the experimental structural data was required. From the three optimisation methods tested, the full optimisation provided the best reference structure for the calculation of the NMR parameters of the studied phosphates. Also, a better prediction of the chemical shifts was possible by using a correction to the GIPAW calculated shielding.

4.
Langmuir ; 35(11): 4068-4076, 2019 Mar 19.
Artigo em Inglês | MEDLINE | ID: mdl-30793904

RESUMO

The phosphonic acid moiety is commonly used as an anchoring group for the surface modification of imogolite. However, the impact of the reaction on its structure has never been clearly analyzed before. We study the reaction of imogolite and decylphosphonic acid by combining infrared spectroscopy, X-ray scattering, scanning electron microscopy, transmission electron microscopy, and solid-state nuclear magnetic resonance spectroscopy. Instead of a surface functionalization, we observe the formation of a lamellar phase interconnected with imogolite bundles. Although we find no evidence for grafted imogolite tubes, we observe the expected dispersion characteristics and stabilization of water in toluene emulsions described in the literature. Based on the surface chemistry of imogolite, we propose an explanation for the observed reactivity and link the structural features of the obtained composite material to its dispersibility in toluene and its observed properties at the toluene-water interface.

5.
Phys Chem Chem Phys ; 21(39): 21709-21725, 2019 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-31389435

RESUMO

Machine learning (ML) approaches are investigated for the prediction of nuclear magnetic resonance (NMR) parameters in aluminosilicate glasses, for which NMR has proven to be a cutting-edge method over the last decade. DFT computations have emerged as a new dimension for complementing these NMR methods although suffering from severe limitations in terms of size, time and computational resources consumption. While previous approaches tend to use DFT-GIPAW calculations for the prediction of NMR parameters in glassy systems, we propose to employ ML methods, characterized by a speed similar to that of classical molecular dynamics while the accuracy of ab initio methods can be reached. We design ML procedures to predict the isotropic magnetic shielding (σiso) for different multicomponent relevant glass compositions. The ML predictions of σiso deviate from DFT-GIPAW calculations, when including relaxed and room-temperature structures, by 0.7 ppm for 29Si (1.0% of the total span of the calculated ) and 1.5 ppm for 17O (1.9%) in SiO2 glasses, 1.4 ppm for 23Na (1.5%) in Na2O-SiO2 and 1.5 ppm for 27Al (2.1%) in Al2O3-Na2O-SiO2 systems. We compare the performances obtained for a set of three descriptors suitable for encoding atomic local environments information (atom-centered representations) together with seven popular ML algorithms with a focus on the simple (but robust) linear ridge regression (LRR) and the popular smooth overlap of atomic positions (SOAP) descriptor.

6.
Inorg Chem ; 57(24): 15350-15360, 2018 Dec 17.
Artigo em Inglês | MEDLINE | ID: mdl-30475605

RESUMO

Because of its sensitivity to the atomic scale environment, solid-state NMR offers new perspectives in terms of structural characterization, especially when applied jointly with first-principles calculations. Particularly, challenging is the study of actinide-based materials because of the electronic complexity of the actinide cations and to the hazards due to their radioactivity. Consequently, very few studies have been published in this subfield. In the present paper, we report a joint experimental-theoretical analysis of thorium tetrafluoride, ThF4, containing a closed-shell actinide (5f0) cation. Its crystalline structure has been revisited in the present work using powder neutron diffraction experiments. The 19F NMR parameters of the seven F crystallographic sites have been modeled using an empirical superposition model, periodic first-principles calculations, and a cluster-based all-electron approach. On the basis of the atomic position optimized structure, a complete and unambiguous assignment of the 19F NMR resonances to the F sites has been obtained.

7.
J Chem Phys ; 147(16): 161711, 2017 Oct 28.
Artigo em Inglês | MEDLINE | ID: mdl-29096466

RESUMO

Sodium borosilicate glasses Na2O-B2O3-SiO2 (NBS) are complex systems from a structural point of view. Three main building units are present: tetrahedral SiO4 and BO4 (BIV) and triangular BO3 (BIII). One of the salient features of these compounds is the change of the BIII/BIV ratio with the alkali concentration, which is very difficult to capture in force fields-based molecular dynamics simulations. In this work, we develop a polarizable force field that is able to reproduce the boron coordination and more generally the structure of several NBS systems in the glass and in the melt. The parameters of the potential are fitted from density functional theory calculations only, in contrast with the existing empirical potentials for NBS systems. This ensures a strong improvement on the transferability of the parameters from one composition to another. Using this new force field, the structure of NBS systems is validated against neutron diffraction and nuclear magnetic resonance experiments. A special focus is given to the distribution of BIII/BIV with respect to the composition and the temperature.

8.
Environ Sci Technol ; 50(21): 11549-11558, 2016 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-27723980

RESUMO

Silicate glasses containing lead, also called lead crystal glasses, are commonly used as food product containers, in particular for alcoholic beverages. Lead's health hazards require major attention, which can first be investigated through the understanding of Pb release mechanisms in solution. The behavior of a commercial crystal glass containing 10.6 mol % of PbO (28.3 wt %) was studied in a reference solution of 4% acetic acid at 22, 40, and 70 °C at early and advanced stages of reaction. High-resolution solid-state 17O and 29Si NMR was used to probe the local structure of the pristine and, for the first time, of the altered lead crystal glass. Inserted into the vitreous structure between the network formers as Si-O-Pb bonds, Pb does not form Pb-O-Pb clusters which are expected to be more easily leached. A part of K is located near Pb, forming mixed Si-O-(Pb,K) near the nonbridging oxygens. Pb is always released into the solution following a diffusion-controlled dissolution over various periods of time, at a rate between 1 and 2 orders of magnitude lower than the alkalis (K and Na). The preferential release of alkalis is followed by an in situ repolymerization of the silicate network. Pb is only depleted in the outermost part of the alteration layer. In the remaining part, it stays mainly surrounded by Si in a stable structural configuration similar to that of the pristine glass. A simple model is proposed to estimate the Pb concentration as a function of glass surface, solution volume, temperature, and contact time.


Assuntos
Vidro/química , Silicatos/química , Íons , Chumbo , Sódio , Soluções
9.
J Chem Phys ; 145(12): 124508, 2016 Sep 28.
Artigo em Inglês | MEDLINE | ID: mdl-27782645

RESUMO

Using molecular simulations, we analyze the microscopic processes driving the Nuclear Magnetic Resonance (NMR) relaxation of quadrupolar cations in water. The fluctuations of the Electric Field Gradient (EFG) experienced by alkaline and magnesium cations, which determine the NMR relaxation time, are mainly due to the dynamics of water molecules in their solvation shell. The dynamics of the ion plays a less important role, with the exception of the short-time dynamics in the lighter Li+ case, for which rattling in the solvent cage results in oscillations of the EFG autocorrelation function (ACF). Several microscopic mechanisms that may a priori contribute to the decay of the EFG-ACF occur in fact over too long time scales: entrance/exit of individual water molecules into/from the solvation shell, rotation of a molecule around the ion, or reorientation of the molecule. In contrast, the fluctuations of the ion-water distance are clearly correlated to that of the EFG. Nevertheless, it is not sufficient to consider a single molecule due to the cancellations arising from the symmetry of the solvation shell. The decay of the EFG-ACF, hence NMR relaxation, is in fact governed by the collective symmetry-breaking fluctuations of water in the first solvation shell.

10.
Inorg Chem ; 54(7): 3552-61, 2015 Apr 06.
Artigo em Inglês | MEDLINE | ID: mdl-25798917

RESUMO

The crystal structure of trisodium uranate, which forms following the interaction between sodium and hyperstoichiometric urania, has been solved for the first time using powder X-ray and neutron diffraction, X-ray absorption near-edge structure spectroscopy, and solid-state (23)Na multiquantum magic angle spinning nuclear magnetic resonance. The compound, isostructural with Na3BiO4, has monoclinic symmetry, in space group P2/c. Moreover, it has been shown that this structure can accommodate some cationic disorder, with up to 16(2)% sodium on the uranium site, corresponding to the composition α-Na3(U1-x,Nax)O4 (0 < x < 0.18). The α phase adopts a mixed valence state with the presence of U(V) and U(VI). The two polymorphs of this compound described in the literature, m- and ß-Na3(U1-x,Nax)O4, have also been investigated, and their relationship to the α phase has been established. The completely disordered low-temperature cubic phase corresponds to a metastable phase. The semiordered high-temperature ß phase is cubic, in space group Fd3̅m.

11.
J Chem Phys ; 143(19): 194504, 2015 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-26590539

RESUMO

Nuclear Magnetic Resonance (NMR) relaxation is sensitive to the local structure and dynamics around the probed nuclei. The Electric Field Gradient (EFG) is the key microscopic quantity to understand the NMR relaxation of quadrupolar ions, such as (7)Li(+), (23)Na(+), (25)Mg(2+), (35)Cl(-), (39)K(+), or (133)Cs(+). Using molecular dynamics simulations, we investigate the statistical and dynamical properties of the EFG experienced by alkaline, alkaline Earth, and chloride ions at infinite dilution in water. Specifically, we analyze the effect of the ionic charge and size on the distribution of the EFG tensor and on the multi-step decay of its auto-correlation function. The main contribution to the NMR relaxation time arises from the slowest mode, with a characteristic time on the picosecond time scale. The first solvation shell of the ion plays a dominant role in the fluctuations of the EFG, all the more that the ion radius is small and its charge is large. We propose an analysis based on a simplified charge distribution around the ion, which demonstrates that the auto-correlation of the EFG, hence the NMR relaxation time, reflects primarily the collective translational motion of water molecules in the first solvation shell of the cations. Our findings provide a microscopic route to the quantitative interpretation of NMR relaxation measurements and open the way to the design of improved analytical theories for NMR relaxation for small ionic solutes, which should focus on water density fluctuations around the ion.

12.
Solid State Nucl Magn Reson ; 68-69: 31-6, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25912209

RESUMO

4³Ca MQMAS NMR spectra of three silica-based glasses in which Ca²âº ions play different structural roles have been collected and processed in order to extract the underlying NMR parameter distributions. The NMR parameters have been interpreted with the help of molecular dynamics simulations and DFT-GIPAW calculations. This synergetic experimental-computational approach has allowed us to investigate the Ca environment, to estimate Ca coordination numbers from MD-derived models, and to push further the discussion about 4³Ca NMR sensitivity to the first and second coordination spheres: 4³Ca δiso and Ca-O distance can be successfully correlated as a function of Ca coordination number.

13.
J Chem Theory Comput ; 20(3): 1358-1370, 2024 Feb 13.
Artigo em Inglês | MEDLINE | ID: mdl-38217496

RESUMO

An accurate and transferable machine learning (ML) potential for the simulation of binary sodium silicate glasses over a wide range of compositions (from 0 to 50% Na2O) was developed. The potential energy surface is approximated by the sum of atomic energy contributions mapped by a neural network algorithm from the local geometry comprising information on atomic distances and angles with neighboring atoms using the DeePMD code [Wang, H. Comput. Phys. Commun. 2018, 228, 178-184]. Our model was trained on a large data set of total energies and atomic forces computed at the density functional theory level on structures extracted from classical molecular dynamics (MD) simulations performed at several temperatures from 300 to 3000 K. This allows for the generation of a robust and transferable ML potential applicable over the full compositional range of glass formability at different temperatures that outperforms the empirical potentials available in the literature in reproducing structures and properties such as bond angle distribution, total distribution functions, and vibrational density of state. The generality of the approach enables the future training of a potential with other or more elements allowing for simulations of structures, properties, and behavior of ternary and multicomponent oxide glasses with nearly ab initio accuracy at a fraction of the computational cost.

14.
Inorg Chem ; 51(3): 1827-36, 2012 Feb 06.
Artigo em Inglês | MEDLINE | ID: mdl-22277014

RESUMO

Calcium silicate hydrate (C-S-H) is the main constituent of hydrated cement paste and determines its cohesive properties. Because of the environmental impact of cement industry, it is more and more common to replace a part of the clinker in cement by secondary cementitious materials (SCMs). These SCMs are generally alumina-rich and as a consequence some aluminum is incorporated into the C-S-H. This may have consequences on the cohesion and durability of the material, and it is thus of importance to know the amount and the location of Al in C-S-H and what the parameters are that control these features. The present paper reports the (29)Si and (27)Al MAS NMR analyses of well-characterized C-A-S-H samples (C-S-H containing Al). These samples were synthesized using an original procedure that successfully leads to pure C-A-S-H of controlled compositions in equilibrium with well-characterized solutions. The (27)Al MAS NMR spectra were quantitatively interpreted assuming a tobermorite-like structure for C-A-S-H to determine the aluminum location in this structure. For this purpose, an in-house written software was used which allows decomposing several spectra simultaneously using the same constrained spectral parameters for each resonance but with variable intensities. The hypothesis on the aluminum location in the C-A-S-H structure determines the proportion of each silicon site. Therefore, from the (27)Al NMR quantitative results and the chemical composition of each sample, the intensity of each resonance line in the (29)Si spectra was set. The agreement between the experimental and calculated (29)Si MAS NMR spectra corroborates the assumed C-A-S-H structure and the proposed Al incorporation mechanism. The consistency between the results obtained for all compositions provides another means to assess the assumptions on the C-A-S-H structure. It is found that Al substitutes Si mainly in bridging positions and moderately in pairing positions in some conditions. Al in pairing site is observed only for Ca/(Si+Al) ratios greater than 0.95 (equivalent to 4 mmol.L(-1) of calcium hydroxide). Finally, the results suggest that penta and hexa-coordinated aluminum are adsorbed on the sides of the C-A-S-H particles.

15.
Solid State Nucl Magn Reson ; 41: 32-47, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22197191

RESUMO

This article describes the use of an alternative expansion scheme called Floquet-Magnus expansion (FME) to study the dynamics of spin system in solid-state NMR. The main tool used to describe the effect of time-dependent interactions in NMR is the average Hamiltonian theory (AHT). However, some NMR experiments, such as sample rotation and pulse crafting, seem to be more conveniently described using the Floquet theory (FT). Here, we present the first report highlighting the basics of the Floquet-Magnus expansion (FME) scheme and hint at its application on recoupling sequences that excite more efficiently double-quantum coherences, namely BABA and C7 radiofrequency pulse sequences. The use of Λ(n)(t) functions available only in the FME scheme, allows the comparison of the efficiency of BABA and C7 sequences.

16.
J Chem Phys ; 135(4): 044109, 2011 Jul 28.
Artigo em Inglês | MEDLINE | ID: mdl-21806092

RESUMO

In this article, we present an alternative expansion scheme called Floquet-Magnus expansion (FME) used to solve a time-dependent linear differential equation which is a central problem in quantum physics in general and solid-state nuclear magnetic resonance (NMR) in particular. The commonly used methods to treat theoretical problems in solid-state NMR are the average Hamiltonian theory (AHT) and the Floquet theory (FT), which have been successful for designing sophisticated pulse sequences and understanding of different experiments. To the best of our knowledge, this is the first report of the FME scheme in the context of solid state NMR and we compare this approach with other series expansions. We present a modified FME scheme highlighting the importance of the (time-periodic) boundary conditions. This modified scheme greatly simplifies the calculation of higher order terms and shown to be equivalent to the Floquet theory (single or multimode time-dependence) but allows one to derive the effective Hamiltonian in the Hilbert space. Basic applications of the FME scheme are described and compared to previous treatments based on AHT, FT, and static perturbation theory. We discuss also the convergence aspects of the three schemes (AHT, FT, and FME) and present the relevant references.

17.
Solid State Nucl Magn Reson ; 40(1): 1-20, 2011 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-21612895

RESUMO

In 2001, Mauri and Pickard introduced the gauge including projected augmented wave (GIPAW) method that enabled for the first time the calculation of all-electron NMR parameters in solids, i.e. accounting for periodic boundary conditions. The GIPAW method roots in the plane wave pseudopotential formalism of the density functional theory (DFT), and avoids the use of the cluster approximation. This method has undoubtedly revitalized the interest in quantum chemical calculations in the solid-state NMR community. It has quickly evolved and improved so that the calculation of the key components of NMR interactions, namely the shielding and electric field gradient tensors, has now become a routine for most of the common nuclei studied in NMR. Availability of reliable implementations in several software packages (CASTEP, Quantum Espresso, PARATEC) make its usage more and more increasingly popular, maybe indispensable in near future for all material NMR studies. The majority of nuclei of the periodic table have already been investigated by GIPAW, and because of its high accuracy it is quickly becoming an essential tool for interpreting and understanding experimental NMR spectra, providing reliable assignments of the observed resonances to crystallographic sites or enabling a priori prediction of NMR data. The continuous increase of computing power makes ever larger (and thus more realistic) systems amenable to first-principles analysis. In the near future perspectives, as the incorporation of dynamical effects and/or disorder are still at their early developments, these areas will certainly be the prime target.


Assuntos
Espectroscopia de Ressonância Magnética/métodos , Vidro/química , Halogênios/química , Propriedades de Superfície , Temperatura , Elementos de Transição/química
18.
J Phys Chem B ; 125(33): 9454-9466, 2021 08 26.
Artigo em Inglês | MEDLINE | ID: mdl-34382396

RESUMO

An understanding of the conditions that govern the self-assembly process of peptides is a fundamental step toward the design of new nanostructures that possess interesting properties. In this work, we first synthesize and explore extensively diphenylalanine (FF) self-assembling crystals formed in different solvents (i.e., solvatomorphs) using polarized optical microscopy and transmission electron microscopy. Then, we develop a numerical method that allows an unambiguous classification of the solvatomorphs through a K-means automatic clustering method. In addition, we generate a two-dimensional (2D) representation of the solvatomorphic space together with the clustering results via a principal component analysis (PCA). The classification is based on structural similarities of solvatomorphs as revealed by the analysis of their respective infrared spectra. Among the 20 samples considered, 4 clear clusters are extracted within which the compounds show very similar crystalline structures. The information extracted allows us to assign many of the peaks that appear in the complex IR spectra of the samples considered. The implementation of the overall procedure we propose, i.e., "GAULOIS" and "REFRACT-R", is transferable to other types of spectra and paves the way for a systematic, fast, and accurate classification method applicable to various types of experimental spectroscopic data.


Assuntos
Nanoestruturas , Fenilalanina , Peptídeos , Solventes
19.
Nanoscale ; 13(5): 3092-3105, 2021 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-33522536

RESUMO

Imogolite nanotubes are potentially promising co-photocatalysts because they are predicted to have curvature-induced, efficient electron-hole pair separation. This prediction has however not yet been experimentally proven. Here, we investigated the behavior upon irradiation of these inorganic nanotubes as a function of their water content to understand the fate of the generated electrons and holes. Two types of aluminosilicate nanotubes were studied: one was hydrophilic on its external and internal surfaces (IMO-OH) and the other had a hydrophobic internal cavity due to Si-CH3 bonds (IMO-CH3), with the external surface remaining hydrophilic. Picosecond pulse radiolysis experiments demonstrated that the electrons are efficiently driven outward. For imogolite samples with very few external water molecules (around 1% of the total mass), quasi-free electrons were formed. They were able to attach to a water molecule, generating a water radical anion, which ultimately led to dihydrogen. When more external water molecules were present, solvated electrons, precursors of dihydrogen, were formed. In contrast, holes moved towards the internal surface of the tubes. They mainly led to the formation of dihydrogen and of methane in irradiated IMO-CH3. The attachment of the quasi-free electron to water was a very efficient process and accounted for the high dihydrogen production at low relative humidity values. When the water content increased, electron solvation dominated over attachment to water molecules. Electron solvation led to dihydrogen production, albeit to a lesser extent than quasi-free electrons. Our experiments demonstrated the spontaneous curvature-induced charge separation in these inorganic nanotubes, making them very interesting potential co-photocatalysts.

20.
J Am Chem Soc ; 132(6): 1734-5, 2010 Feb 17.
Artigo em Inglês | MEDLINE | ID: mdl-20092274

RESUMO

For the structural determination of a ligand bound to an amorphous macromolecular system, solid-state NMR can be used to provide interatomic distances. It is shown here that selective labeling in discrete locations with tritium enables accurate measurement of long-range distances owing to the high gyromagnetic ratio of this nucleus, without structural modification of the molecule. This approach gives access to the largest NMR distance ever measured between two nuclei (14.4 A). (3)H MAS NMR appears to be a promising tool for structural applications in the biological and material sciences.


Assuntos
Espectroscopia de Ressonância Magnética/métodos , Trítio
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