Detalhe da pesquisa
1.
Mesoscale DNA feature in antibody-coding sequence facilitates somatic hypermutation.
Cell
; 186(10): 2193-2207.e19, 2023 05 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-37098343
2.
A kinetic model reveals the critical gating motifs for donor-substrate loading into Actinobacillus pleuropneumoniae N-glycosyltransferase.
Phys Chem Chem Phys
; 26(17): 13441-13451, 2024 May 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-38647259
3.
Loading dynamics of one SARS-CoV-2-derived peptide into MHC-II revealed by kinetic models.
Biophys J
; 122(9): 1665-1677, 2023 05 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-36964657
4.
Phosphorylation Regulation Mechanism of ß2 Integrin for the Binding of Filamin Revealed by Markov State Model.
J Chem Inf Model
; 63(2): 605-618, 2023 01 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-36607244
5.
Atomic resolution of short-range sliding dynamics of thymine DNA glycosylase along DNA minor-groove for lesion recognition.
Nucleic Acids Res
; 49(3): 1278-1293, 2021 02 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-33469643
6.
Mechanism of REST/NRSF regulation of clustered protocadherin α genes.
Nucleic Acids Res
; 49(8): 4506-4521, 2021 05 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-33849071
7.
DNA Deformation Exerted by Regulatory DNA-Binding Motifs in Human Alkyladenine DNA Glycosylase Promotes Base Flipping.
J Chem Inf Model
; 62(13): 3213-3226, 2022 07 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-35708296
8.
Dynamics of peptide loading into major histocompatibility complex class I molecules chaperoned by TAPBPR.
Phys Chem Chem Phys
; 24(20): 12397-12409, 2022 May 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-35575131
9.
Computational investigations on target-site searching and recognition mechanisms by thymine DNA glycosylase during DNA repair process.
Acta Biochim Biophys Sin (Shanghai)
; 54(6): 796-806, 2022 May 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-35593467
10.
Allosteric regulation in CRISPR/Cas1-Cas2 protospacer acquisition mediated by DNA and Cas2.
Biophys J
; 120(15): 3126-3137, 2021 08 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-34197800
11.
DeepAntigen: a novel method for neoantigen prioritization via 3D genome and deep sparse learning.
Bioinformatics
; 36(19): 4894-4901, 2020 12 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-32592462
12.
Ikarugamycin inhibits pancreatic cancer cell glycolysis by targeting hexokinase 2.
FASEB J
; 34(3): 3943-3955, 2020 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-31944405
13.
Determining selection free energetics from nucleotide pre-insertion to insertion in viral T7 RNA polymerase transcription fidelity control.
Nucleic Acids Res
; 47(9): 4721-4735, 2019 05 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-30916310
14.
Key structural motifs in Thymine DNA glycosylase responsible for recognizing certain DNA bent conformation revealed by atomic simulations.
Biochem Biophys Res Commun
; 526(4): 953-959, 2020 06 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-32291075
15.
Refolding Dynamics of gp41 from Pre-fusion to Pre-hairpin States during HIV-1 Entry.
J Chem Inf Model
; 60(1): 162-174, 2020 01 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-31845803
16.
Base-flipping dynamics from an intrahelical to an extrahelical state exerted by thymine DNA glycosylase during DNA repair process.
Nucleic Acids Res
; 46(11): 5410-5425, 2018 06 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-29762710
17.
Dynamics of the excised base release in thymine DNA glycosylase during DNA repair process.
Nucleic Acids Res
; 46(2): 568-581, 2018 01 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-29253232
18.
Understanding the molecular mechanism of umami recognition by T1R1-T1R3 using molecular dynamics simulations.
Biochem Biophys Res Commun
; 514(3): 967-973, 2019 06 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-31092329
19.
Inhibition of polypeptide N-acetyl-α-galactosaminyltransferases is an underlying mechanism of dietary polyphenols preventing colorectal tumorigenesis.
Bioorg Med Chem
; 27(15): 3372-3382, 2019 08 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-31227364
20.
Opening dynamics of HIV-1 gp120 upon receptor binding is dictated by a key hydrophobic core.
Phys Chem Chem Phys
; 21(47): 26003-26016, 2019 Dec 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-31764922