Development of a database management/analysis system for field research activities within a coordinated research project.

There are several ways a database/analysis system can assist a scientist engaged in field research. Specifically, it can assist the scientist with accurate data collection and more rigorous data analyses. The database management portion of this system allows accurate data collection and provides easy data entry through the use of forms. In addition, it can provide the scientist with structured methods of error checking data entry and checking for implausible values and false zeros. The system can also assist the scientist with the organization of the data and provide easy methods of sorting, grouping, and selecting data for analysis. Data can then be exported to a data analysis program where the first step is data validation. A menu of analyses using examples from the coordinated research project (CRP) are demonstrated using statistical methods that test continuous and categorical data.

Use of metabolic profiles in dairy cattle in tropical and subtropical countries on smallholder dairy farms.

Metabolic profile testing has generally been used as part of a multidisciplinary approach for dairy herds in temperate climates. Our goal was to evaluate the effectiveness of the technique for identifying constraints on productivity in small herds in environments less favorable for milk production. Metabolites tested were chosen for stability in the sample after collection of blood, ease of analysis and practical knowledge of the meaning of the results. Blood levels of five different metabolites in low-producing dairy cows belonging to smallholders in tropical and subtropical environments were measured. The study involved 13 projects with 80 cows in each, carried out in six Latin American, six Asian, and one southern European countries. Data were also collected on feeding, body condition score (BCS) and weight change, parasitism, and reproduction. In Chile, Mexico, Paraguay, Philippines, Uruguay, and Venezuela, globulin levels were high in > 17% of cows sampled on each occasion. Globulin levels were also high in Turkey and Vietnam on one or more occasions. In Paraguay, 49% of cows had high globulin levels at two to three months after calving. These results suggest that inflammatory disease was present to a potentially important degree, although this was not always investigated and not always taken into account. In all countries except Mexico and Venezuela, high beta-hydroxybutyrate (BHB) levels before calving in many cows highlighted the presence of condition loss in late pregnancy, an important potential constraint on productivity and fertility. Fewer cows showed high BHB levels in lactation, whereas change in BCS and weight was more sensitive for measuring negative energy balance. Urea concentrations were low in only small numbers of cows suggesting that dietary protein shortages were not common. Albumin values were low mainly in cows where globulin values were high and, hence, did not generally provide additional information. The exception was in China where pregnant yaks over winter had high BHB and low albumin values, suggesting that they were seriously underfed. This observation stimulated a successful nutritional intervention in the following winter. Inorganic phosphate values were within the reference range in most countries a majority of the time suggesting, contrary to expectation, that this mineral was not commonly a constraint. The use of metabolic profile testing proved valuable in drawing attention to important potential constraints on productivity in dairy cows in tropical and subtropical environments and in confirming those which were not.

Corrigendum to "A linear programming assessment of the profit from strategies to reduce the prevalence of Staphylococcus aureus mastitis" [Prev. Vet. Med. 33 (1998) 183-193].

We used a linear programming model to estimate the financial returns to a Staphylococcus aureus testing and control program over a 1-year period for a 100-cow herd, with a 8636kg rolling-herd average. Six tests, which vary in sensitivity from 0.80 to 0.98 and specificity of 0.99, were examined in simulated herds with 10, 20, and 30% prevalence of S. aureus infection. Sensitivity of these results to a range of assumptions regarding rolling-herd average, milk price, somatic cell-count premium, and cost and cure rate of dry treatment were examined to determine the profits from the program. The profits of a control program are most dependent upon prevalence and cell-count premium. In our simulation for a 100-cow herd, a testing and control program results in a profit ranging from US$1.50 to US$20 per cow per year, except under the lowest prevalence and most-adverse conditions (low yield or low SCC premium).

A linear programming assessment of the profit from strategies to reduce the prevalence of Staphylococcus aureus mastitis.

We used a linear programming model to estimate the financial returns to a Staphylococcus aureus testing and control program over a 1-year period for a 100-cow herd, with a 8636-kg rolling-herd average. Six tests, which vary in sensitivity from 0.80 to 0.98 and specificity of 0.99, were examined in simulated herds with 10, 20 and 30% prevalence of S. aureus infection. Sensitivity of these results to a range of assumptions regarding rolling-herd average, milk price, somatic cell-count premium, and cost and cure rate of dry treatment were examined to determine the profits from the program. The profits of a control program are most dependent upon prevalence, cell-count premium, and cost of dry treatment. In our simulation for a 100-cow herd, a testing and control program appears to cost less than US$10 per cow per year, and pays for itself within 1 yr, except under the lowest prevalence and most-adverse conditions (low yield, high cost of dry treatment, or low SCC premium.

Relation among body condition score, serum urea nitrogen and cholesterol concentrations, and reproductive performance in high-producing Holstein dairy cows in early lactation.

Body condition scoring (using a 5-point scale with quarter-point divisions) was performed on 66 Holstein dairy cows that began their second or later lactation in August, September, or October 1988. Cows' body condition was scored beginning on postpartum day 4 (+/- 1) and subsequently at postpartum days (+/- 1) 18, 32, 46, 60, 73 and 87. Blood samples were obtained on the same dates. Reproductive health examinations were conducted by 1 of 2 veterinarians beginning at postpartum day 21. Reproductive performance was evaluated in relation to body condition score and serum urea nitrogen and cholesterol concentrations. Number of days to first recorded signs of estrus and first breeding were not related to body condition score at calving, amount of condition loss, cumulative 80-day milk yield, or 305-day fat corrected milk yield. Cows that calved with body condition score greater than or equal to 3.50 required more days to conceive. Cows losing greater than 0.75 points of condition had longer days of conception. Body condition score at calving and amount of condition lost were not related to services per conception or diagnosis of follicular cyst. Cumulative 80-day milk yield was not related to days to conception or services per conception. Cows that produced greater than or equal to the mean 305-day milk yield required more services and had longer days to conception than cows that produced less than the mean 305-day milk yield.(ABSTRACT TRUNCATED AT 250 WORDS)

Relation among body condition score, milk production, and serum urea nitrogen and cholesterol concentrations in high-producing Holstein dairy cows in early lactation.

Body condition scoring (using a 5-point scale with quarter-point divisions) was performed on 66 Holstein dairy cows that began their second or later lactation in August, September, or October 1988. Body condition was scored, beginning on postpartum day 4(+/- 1) and subsequently at postpartum days (+/- 1) 18, 32, 46, 60, 73, and 87. Blood samples were obtained on the same dates. Kilograms of milk produced per cow was measured daily. Body condition score and changes in body condition score were evaluated in relation to daily milk production, cumulative 80-day milk yield, and serum urea nitrogen and cholesterol concentrations. Average daily milk production during week 1 was indicative of cumulative 80-day production, but not of 305-day milk yields. Cows that calved with body condition score greater than or equal to 3.50 did not differ in average daily milk production, cumulative 80-day milk yield, or 305-day milk yield, compared with cows that calved with body condition score less than 3.50. Cows that calved with body condition score greater than or equal to 3.50 lost more condition than did cows that calved with body condition score less than 3.50. Body condition score at calving and amount of body condition loss interacted with the rate of change in daily milk production. Serum urea nitrogen concentration did not differ for cows grouped by cumulative 80-day milk production or for cows grouped by amount of condition loss. Serum cholesterol values were higher than previously reported values and increased directly with milk production. Serum cholesterol values were inversely related to condition loss but changes in cholesterol concentration were not related to condition loss.

Epidemiologic and economic analyses of an unusually long epizootic of trichomoniasis in a large California dairy herd.

An epizootic of trichomoniasis in a large California dairy herd caused an estimated economic loss of $66,538 ($665/infected cow). Greatest losses were caused by infertility (about 50% of losses caused by excess days open). The disease continued in the herd, despite culling older bulls and replacing them with young uninfected bulls and despite institution of an artificial insemination (AI) breeding program for 2 high-production strings. The AI breeder's practice of checking for estrus by vaginal examination was implicated in the spread of the disease. Of 5 cows that became infected before or at conception, 1 had the infection throughout the gestation period and into the next lactation. The prevalence of trichomoniasis in the herd (estimated on the basis of culture results) was 10.67%. The culture method had a calculated sensitivity of only 58.7%. Of 940 cows in the herd, 132 aborted during the epizootic (8 aborted twice); 45 abortions would have been expected in a dairy herd of this size in the absence of trichomoniasis. In high-density mass-bred herds, conditions and/or management practices may be conducive for trichomoniasis transmission, and generally recommended control programs should be adjusted on such dairies. In particular, dairy operators should not assume that culling older bulls and replacing them with young uninfected bulls and that institution of an AI program will be effective in limiting the spread of the disease. Moreover, a diagnostic test with improved sensitivity would greatly assist in the identification of infected cows.

Benefits and costs of a control program for an epizootic of Staphylococcus aureus mastitis.

In response to an epizootic of Staphylococcus aureus mastitis, the owner of a 2,000-cow dairy instituted a treatment, prevention, and control program (hereafter, "intervention program") consisting of teat dipping, bacteriologic culturing of milk from all fresh cows and from cows with clinical signs of infection, and culling cows found to be infected. The program was highly beneficial, yielding $2.40 in direct benefits for every $1 invested.

Why the dairy industry does not make greater use of veterinarians.

Interviews with 32 large-scale dairy operators in Tulare County, Calif, indicated that as large-scale dairies have replaced smaller dairies, the operator's reliance on the veterinarian as a primary source of advice about a wide range of dairy health management issues has declined. Large dairies require an integrated approach to herd management, ie, herd health, herd management, and production. Dairy operators do not look to veterinarians to provide this integrated approach, instead relying on feed representatives, nutritionists, accountants, and staff of dairy cooperatives. Operators perceive veterinarians as primary providers of clinical services only. As veterinarians have little conflict of interest or vested interest in giving advice about nutrition, proper facility design, and other general management issues, this perception of the veterinarian as a clinician only deprives the dairy operator of an objective appraisal of herd health, management, and production. Changing this perception will require a restructuring of many veterinary medical school curricula, with an emphasis on courses in epidemiology, preventive medicine, herd management, nutrition, and similar courses.

Estimation of economic loss associated with anaplasmosis in California beef cattle.

On the basis of questionnaire surveys and personal interviews with veterinarians, ranchers, and livestock farm advisors, the seriousness of anaplasmosis in California was determined. In 1976, the economic loss due to anaplasmosis in the study sample of beef cattle was $2,203,150. When inferences were made from the sample population to include the whole population of beef cattle, this loss was estimated to be $5,244,319. These values were in contrast to a farm advisors' estimate of $11 million loss due to anaplasmosis, which was included in a total estimated loss of $300 million due to all livestock diseases of economic importance in California. It appeared that anaplasmosis, although having a substantial economic impact in California, is not as economically devastating as it was once thought to be. It was concluded that private programs currently in use (vaccination and treatment) are sufficient to control anaplasmosis.

Associations between subclinical paratuberculosis and milk production, milk components, and somatic cell counts in dairy herds.

OBJECTIVE: To determine associations between subclinical Mycobacterium paratuberculosis infection and milk production, milk components, and somatic cell counts of dairy cattle. DESIGN: Cross-sectional epidemiologic survey. ANIMALS: 23 dairy herds in Wisconsin containing 1,653 adult cows were studied. The herds had above average milk production and a history of bovine paratuberculosis in the herd within the previous 12 months. PROCEDURE: All adult cows in the herds were tested for paratuberculosis by use of an absorbed ELISA. Milk yield, fat, protein, and somatic cell count data were retrieved electronically from Dairy Herd Improvement Association records. RESULTS: 147 ELISA-positive and 1,506 ELISA-negative cows were identified. ELISA-positive cows had a mature-equivalent milk production of 376 kg (829 lb)/lactation less than that for ELISA-negative herdmates. Significant difference was not found in lactation average percent-ages of fat and protein, or somatic cell count linear score. When comparing ELISA-positive and -negative cow's current mature equivalent milk with all previous lactations, significant difference was found only from the immediate-preceding lactation. When this difference was examined by parity group, significant difference was confined to cows in the second lactation. CLINICAL IMPLICATIONS: Subclinical paratuberculosis infections, as determined by ELISA, are associated with a 4% reduction in milk yield and add to the already substantial costs of clinical M paratuberculosis infection in the dairy industry.

Economic losses from an episode of zinc toxicosis on a California veal calf operation using a zinc sulfate-supplemented milk replacer.

An episode of zinc toxicosis in 95 veal calves caused $29,602 in losses to the producer ($315/affected calf), most of them direct, out-of-pocket losses. Increased calf mortality and increased veterinary service costs accounted for a majority (70%) of the losses. Reduction of losses may have been accomplished by removing the source and increasing the roughage content in the diet, or by shipping the animals for immediate slaughter. Given the magnitude of the financial loss, especially those associated with calf mortality, it was concluded that producers should refrain from using large amounts of mineral supplements unless a deficiency has been diagnosed.

Effects of a high-density intramammary device on mammary glands, production, and reproductive performance in dairy cows.

A clinical field trial was undertaken to determine the influence of an intramammary device (IMD) on environmental mastitis and production. On 4 central California dairies, 200 Holstein first-lactation cows were randomly assigned to 2 groups. Cows in the treatment group were fitted with an IMD, and cows in the control group were not. The incidence of clinical mastitis for the 2 groups was determined during the study period. Bacteriologic monitoring at intervals over 2 lactations (lactation 2 and through 60 days of lactation 3) was used to determine the incidence of subclinical infection. In addition, data were collected to determine whether the groups differed in milk production, butterfat production, post-milking and test-day somatic cell counts, and reproductive efficiency. Total milk production and butterfat production over the 2 lactation periods did not vary significantly between the groups. Also, the groups did not differ in calving-to-conception interval, duration of lactation, calving interval, and calving-to-first service interval. Cows with IMD were significantly less likely to develop clinical mastitis (5% vs 13%) than control cows. The IMD did not appear to affect subclinical infection rates (minor pathogens only) except at day 300 of lactation 2 and at day 10 of lactation 3, when prevalence was greater in the cows with IMD. The minor pathogens were predominately (80%) coagulase-negative staphylococci. It was unusual to have coagulase-negative staphylococci in the same quarter at 2 consecutive samplings, prompting the speculation that during lactation, the duration of coagulase-negative staphylococci infection is short (resolves without intervention).(ABSTRACT TRUNCATED AT 250 WORDS)

Economic modeling of the use of gonadotropin-releasing hormone at insemination to improve fertility in dairy cows.

Economic and sensitivity analysis methods were used to evaluate financial returns from use of gonadotropin-releasing hormone (GnRH) at the time of insemination to enhance fertility of dairy cows. A computer spread sheet was used to determine the best service(s) for GnRH treatment, the increase in conception rate required for economic benefit from treatment, and how profits from GnRH treatment are affected by drug cost, herd reproductive efficiency, and production costs. Financial returns increased from use of GnRH at insemination under most herd conditions. Herds with conception rates less than or equal to 45% benefited from GnRH treatment at any 1 or 2 inseminations. Herds with conception rates greater than or equal to 60% benefited from GnRH treatment only at second or later services. Selection of second and/or third insemination as the GnRH treatment service usually resulted in the greatest total return. The enhancement of fertility necessary to achieve the break-even point with GnRH treatment at third service was 2% for low- and 5% for high-conception-rate herds. Base-line herd conception rates, estrus detection efficiency, replacement costs, value of excess days not pregnant, and cost of treatment had the greatest effect on returns from treatment. Herds with high conception rates and low replacement costs were likely to realize the least benefit from GnRH treatment at insemination. On the basis of our findings, we concluded that GnRH treatment at insemination is a profitable procedure under most herd conditions. Optimal treatment regimens for specific herds may best be determined by using herd performance and management data for calculating returns.

The economic benefit of treating subclinical Streptococcus agalactiae mastitis in lactating cows.

The economic benefits of treating lactating cows for Streptococcus agalactiae mastitis were studied at a large (689 milking cows) central California dairy. Postcure milk production of case cows (infected, treated, and cured) was compared with production of paired control cows (uninfected) and was matched for yield, days in milk, days in gestation, and parity. A simulation was used to plot expected lactation curves for mastitic cows (infected, not treated) with characteristics similar to those of each control cow, and these curves were compared with actual case-cow lactation curves. The difference in actual and expected production was used to calculate net economic benefits of treatment. Comparison of expected with actual production indicated a net benefit from treatment of $396/cow for cows treated in early lactation and $237 for cows treated in midlactation, but a net loss of $55 for cows treated in late lactation. Lactation number did not have a significant impact on economic benefits of treatment. In contrast to other studies indicating no economic benefit from treating mastitis during lactation, this study's positive results may have been attributable to the high cure rate (98%) and the subclinical form of mastitis being treated. Streptococcus agalactiae mastitis treatment during early and midlactation would appear to be an economically justifiable option for dairy managers.

Economic impact of an epizootic of bovine vesicular stomatitis in California.

A recent outbreak of vesicular stomatitis in California's San Joaquin Valley caused economic loss at 2 dairies of $225,000 during a 2-month period. These losses amounted to $202/cow for dairy 1 and $97/cow for dairy 2. The most notable economic losses were associated with high cull rates. The rapid spread of the disease (attack rates were 72% in 66 days for dairy 1 and 38% in 41 days for dairy 2) suggests that high-density herds particularly may be vulnerable to the disease. Factors that may have accounted for this rapid spread included common water troughs, open corrals, and inability of the dairy operator to isolate cows due to lack of space.

Financial assessment of results of intervention to correct a housing-system problem on a dairy farm.

OBJECTIVE: To monitor effects that improvements in housing facilities would have on herd performance. Financial measures were calculated to estimate whether improvements resulted in an improved financial status for the farm. DESIGN: Prospective, observational study. ANIMALS: 160-cow dairy herd. PROCEDURE: Farm visits were conducted from 1990 to 1994. Areas for improvement were identified, and changes were recommended. Herd production and farm financial records were analyzed before, during, and after adoption of recommended changes. RESULTS: After improving facilities, somatic cell count was somewhat constant, but tended to decrease during the last 16 months of the study. During the last 8 months of the study, incidence for clinical cases of mastitis decreased to 3.3% per month. Reproductive variables improved dramatically after implementing use of a bull for breeding. Subjective evaluation of cow comfort and lameness indicated apparent improvements in each area. However, milk production remained fairly constant from January 1991 through December 1994. Review of the arm's financial status revealed that costs of production increased from 1990 through 1993, but decreased in 1994. Slow financial response to improvements were attributed to a large decrease in milk price in 1991 and a poor crop harvest in 1993. Thus, although progress was made toward financial stability, approximately 55% of the farm's assets (determined on a market-basis value) were represented by debt. CLINICAL IMPLICATIONS: It is important to monitor financial status when managing complex health problems that involve several aspects of a farm's operation.

Epidemiologic study of on-farm management practices associated with prevalence of Mycobacterium paratuberculosis infections in dairy cattle.

OBJECTIVE: To use an on-farm recording form to quantity the effect of specific management practices on apparent prevalence of Mycobacterium paratuberculosis in dairy cattle herds. DESIGN: Epidemiologic survey. ANIMALS: 26 commercial Wisconsin dairy farms. PROCEDURES: An instrument was developed on the basis of literature review and expert interviews to quantify on-farm management practices associated with increased apparent prevalence of M paratuberculosis. On-farm visits were conducted to assess how specific management practices were conducted. Apparent prevalence of M paratuberculosis infection was measured for all animals > 20 months old on all farms, using a commercial ELISA. Regression analysis was used to identify management variables that were significantly associated with apparent prevalence of M paratuberculosis. RESULTS: Regression analysis (R2 = 0.90) identified that high scores for environmental conditions, newborn calf care, grower calf care, bred heifer care, and manure handling were significantly associated with M paratuberculosis apparent prevalence in Wisconsin dairy herds. CLINICAL IMPLICATIONS: Environmental conditions, newborn calf care, grower calf management, bred heifer management, and manure handling factors may serve as a prioritized checklist for instructing owners and managers where to place emphasis in changing management practices to limit M paratuberculosis prevalence. Likewise, the factors identified as having low association with apparent prevalence may be de-emphasized in control programs, allowing dairy managers to focus time and finances on more effective components of an M paratuberculosis control program.

An epidemiologic study of mortality in veal calves subsequent to an episode of zinc toxicosis on a California veal calf operation using zinc sulfate-supplemented milk replacer.

Ninety-five 3- to 6-month old male Holstein veal calves were evaluated after an episode of zinc toxicosis, to describe clinical signs and to identify management and/or host-related factors that may have contributed to death. Clinical signs appeared 23 days after feeding of milk replacer commenced. Of 85 calves examined, 64 had pneumonia (75.5%), 62 had ocular signs (72.9%), 46 had diarrhea (54.1%), 34 were anorectic (40.0%), 15 were bloated (17.6%), 8 had cardiac arrhythmias (9.4%), 3 had convulsions (3.5%), and 3 were polydipsic/polyphagic (3.5%). Clinical signs began to appear when calves each were being fed approximately 1.5 to 2.0 g of zinc/day and exposed to a cumulative zinc intake of 42 to 70 g, from a milk replacer containing 706 micrograms of elemental zinc/g of milk replacer. Of 95 calves studied, 1 died before zinc was supplemented, 16 died during the episode, 12 were euthanatized, 1 was lost to follow-up evaluation, 1 was culled, and 64 were slaughtered. Deaths attributable to zinc toxicosis were observed between 25 and 53 days after the milk replacer was supplemented with zinc. Calves died while being exposed cumulatively to 30 to 66 g of zinc. The factors of previous pneumonia severity, age, cumulative daily exposure to zinc, and calf location within a bay were examined for possible associations with mortality, using stepwise logistic regression. Though younger calves tended to have a higher mortality than older calves, neither age category nor severity of pneumonia, before zinc supplementation, accounted for a significant mortality.(ABSTRACT TRUNCATED AT 250 WORDS)

Herd prevalence and geographic distribution of, and risk factors for, bovine paratuberculosis in Wisconsin.

A random sample of Wisconsin dairy herds, stratified by herd size, were tested for paratuberculosis by use of an absorbed ELISA procedure. The ELISA was optimized for overall accuracy by means of receiver operating characteristic curve analysis, and had a sensitivity and specificity of 50.9 and 94.9%, respectively. Herd prevalence was analyzed for correlation with responses to a management practices questionnaire completed by the herd owners. One hundred and fifty-eight herds and 4,990 cattle were tested. Of these, 50% of herds and 7.29% of cattle had positive test results. Calculation of true prevalence from the apparent prevalence indicated that 4.79% of cattle and 34% of the Wisconsin dairy herds tested had serologic evidence of paratuberculosis. Among the 54 herds classified as positive on the basis of true prevalence estimation, the mean number of test positive cattle was 20.3%. The geographic distribution of herds with positive results was not uniform. More infected herds were found in the southern and western districts of Wisconsin than in the eastern district. The west-central district had a larger number of infected herds than did other districts. By use of chi 2 analysis, the only management factor found to be significantly associated with herd prevalence was housing of calves after weaning (P = 0.03). Specifically, in herds with higher prevalence, calves were separated after weaning into calf barns and hutches rather than into pens in the cow barn more often than in herds with lower prevalence. This factor was also considered significant by use of logistic regression analysis.(ABSTRACT TRUNCATED AT 250 WORDS)