Detalhe da pesquisa
1.
Genome scale metabolic network modelling for metabolic profile predictions.
PLoS Comput Biol
; 20(2): e1011381, 2024 Feb.
Artigo
em Inglês
| MEDLINE | ID: mdl-38386685
2.
PathIntegrate: Multivariate modelling approaches for pathway-based multi-omics data integration.
PLoS Comput Biol
; 20(3): e1011814, 2024 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-38527092
3.
Challenges and perspectives for naming lipids in the context of lipidomics.
Metabolomics
; 20(1): 15, 2024 Jan 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-38267595
4.
APEX: an Annotation Propagation Workflow through Multiple Experimental Networks to Improve the Annotation of New Metabolite Classes in Caenorhabditis elegans.
Anal Chem
; 95(48): 17550-17558, 2023 12 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-37984857
5.
FORUM: building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.
Bioinformatics
; 37(21): 3896-3904, 2021 11 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-34478489
6.
PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management.
Metabolomics
; 18(6): 40, 2022 06 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-35699774
7.
DEXOM: Diversity-based enumeration of optimal context-specific metabolic networks.
PLoS Comput Biol
; 17(2): e1008730, 2021 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-33571201
8.
Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis.
PLoS Comput Biol
; 17(9): e1009105, 2021 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-34492007
9.
Osteogenic Response of Human Mesenchymal Stem Cells Analysed Using Combined Intracellular and Extracellular Metabolomic Monitoring.
Cell Physiol Biochem
; 55(3): 311-326, 2021 Jun 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-34148309
10.
Milk metabolome reveals variations on enteric methane emissions from dairy cows fed a specific inhibitor of the methanogenesis pathway.
J Dairy Sci
; 104(12): 12553-12566, 2021 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-34531049
11.
MetaboRank: network-based recommendation system to interpret and enrich metabolomics results.
Bioinformatics
; 35(2): 274-283, 2019 01 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-29982278
12.
Improving lipid mapping in Genome Scale Metabolic Networks using ontologies.
Metabolomics
; 16(4): 44, 2020 03 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-32215752
13.
MetExplore: collaborative edition and exploration of metabolic networks.
Nucleic Acids Res
; 46(W1): W495-W502, 2018 07 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-29718355
14.
The GOLIATH Project: Towards an Internationally Harmonised Approach for Testing Metabolism Disrupting Compounds.
Int J Mol Sci
; 21(10)2020 May 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-32423144
15.
Large-Scale Modeling Approach Reveals Functional Metabolic Shifts during Hepatic Differentiation.
J Proteome Res
; 18(1): 204-216, 2019 01 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-30394098
16.
Computational methods to identify metabolic sub-networks based on metabolomic profiles.
Brief Bioinform
; 18(1): 43-56, 2017 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-26822099
17.
MetExploreViz: web component for interactive metabolic network visualization.
Bioinformatics
; 34(2): 312-313, 2018 Jan 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28968733
18.
Targeted versus untargeted omics - the CAFSA story.
J Inherit Metab Dis
; 41(3): 447-456, 2018 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-29423831
19.
Integrated transcriptomics and metabolomics reveal signatures of lipid metabolism dysregulation in HepaRG liver cells exposed to PCB 126.
Arch Toxicol
; 92(8): 2533-2547, 2018 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-29947894
20.
Avoiding the Misuse of Pathway Analysis Tools in Environmental Metabolomics.
Environ Sci Technol
; 56(20): 14219-14222, 2022 10 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-36162120