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1.
Acta Crystallogr D Biol Crystallogr ; 71(Pt 11): 2344-53, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26527149

RESUMO

The three-dimensional structures of the native enzyme and the FMN complex of the overexpressed form of the oxygenating component of the type II Baeyer-Villiger 3,6-diketocamphane monooxygenase have been determined to 1.9 Å resolution. The structure of this dimeric FMN-dependent enzyme, which is encoded on the large CAM plasmid of Pseudomonas putida, has been solved by a combination of multiple anomalous dispersion from a bromine crystal soak and molecular replacement using a bacterial luciferase model. The orientation of the isoalloxazine ring of the FMN cofactor in the active site of this TIM-barrel fold enzyme differs significantly from that previously observed in enzymes of the bacterial luciferase-like superfamily. The Ala77 residue is in a cis conformation and forms a ß-bulge at the C-terminus of ß-strand 3, which is a feature observed in many proteins of this superfamily.


Assuntos
Proteínas de Bactérias/química , Oxigenases/química , Pseudomonas putida/química , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Domínio Catalítico , Cristalografia por Raios X , FMN Redutase/metabolismo , Mononucleotídeo de Flavina/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Oxigenases/genética , Oxigenases/metabolismo , Plasmídeos/genética , Conformação Proteica , Dobramento de Proteína , Pseudomonas putida/genética , Pseudomonas putida/metabolismo , Alinhamento de Sequência
2.
Appl Microbiol Biotechnol ; 98(9): 3975-86, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24190498

RESUMO

The major limitation in the synthetic application of two-component Baeyer-Villiger monooxygenases was addressed by identifying the 28-kDa flavin-reductase Fre from Escherichia coli as a suitable supplier of reduced FMN for these enzymes. Coexpression of Fre with either 2,5- or 3,6-diketocamphane monooxygenase from Pseudomonas putida NCIMB 10007 significantly enhanced the conversion of camphor and norcamphor serving as representative ketones. With purified enzymes, full conversion was achieved, while only slight amounts of product were formed in the absence of this flavin reductase. Fusion of the genes of Fre and DKCMOs into single open reading frame constructs resulted in unstable proteins exhibiting flavin reducing, but poor oxygenating activity, which led to overall decreased conversion of camphor.


Assuntos
Cânfora/metabolismo , Coenzimas/metabolismo , Proteínas de Escherichia coli/metabolismo , Escherichia coli/enzimologia , FMN Redutase/metabolismo , Mononucleotídeo de Flavina/metabolismo , Oxigenases de Função Mista/metabolismo , Pseudomonas putida/enzimologia , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , FMN Redutase/genética , Expressão Gênica , Oxigenases de Função Mista/genética , Pseudomonas putida/metabolismo , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo
3.
Org Biomol Chem ; 10(31): 6249-65, 2012 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-22733152

RESUMO

Baeyer-Villiger monooxygenases (BVMOs) are useful enzymes for organic synthesis as they enable the direct and highly regio- and stereoselective oxidation of ketones to esters or lactones simply with molecular oxygen. This contribution covers novel concepts such as searching in protein sequence databases using distinct motifs to discover new Baeyer-Villiger monooxygenases as well as high-throughput assays to facilitate protein engineering in order to improve BVMOs with respect to substrate range, enantioselectivity, thermostability and other properties. Recent examples for the application of BVMOs in synthetic organic synthesis illustrate the broad potential of these biocatalysts. Furthermore, methods to facilitate the more efficient use of BVMOs in organic synthesis by applying e.g. improved cofactor regeneration, substrate feed and in situ product removal or immobilization are covered in this perspective.


Assuntos
Técnicas de Química Sintética , Cetonas/metabolismo , Oxigenases de Função Mista/genética , Oxigenases de Função Mista/metabolismo , Engenharia de Proteínas , Sequência de Aminoácidos , Animais , Bactérias/química , Bactérias/enzimologia , Bactérias/genética , Bactérias/metabolismo , Biotransformação , Técnicas de Química Sintética/métodos , Ésteres/química , Ésteres/metabolismo , Fungos/química , Fungos/enzimologia , Fungos/genética , Fungos/metabolismo , Humanos , Cetonas/química , Lactonas/química , Lactonas/metabolismo , Oxigenases de Função Mista/química , Dados de Sequência Molecular , Oxirredução , Engenharia de Proteínas/métodos , Estereoisomerismo
4.
Appl Microbiol Biotechnol ; 96(2): 419-29, 2012 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-22286514

RESUMO

The camphor-degrading Baeyer-Villiger monooxygenases (BVMOs) from Pseudomonas putida NCIMB 10007 have been of interest for over 40 years. So far the FMN- and NADH-dependent type II BVMO 3,6-diketocamphane 1,6-monooxygenase (3,6-DKCMO) and the FAD- and NADPH-dependent type I BVMO 2-oxo-∆3-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase (OTEMO) have not been entirely studied, since it was not possible to produce those enzymes in satisfactory amounts and purity. In this study, we were able to clone and recombinantly express both enzymes and subsequently use them as biocatalysts for various mono- and bicyclic ketones. Full conversion could be reached with both enzymes towards (±)-cis-bicyclo[3.2.0]hept-2-en-6-one and with 3,6-DKCMO towards (−)-camphor. Further OTEMO gave full conversion with norcamphor. OTEMO was found to have a pH optimum of 9 and a temperature optimum of 20 °C and converted (±)-cis-bicyclo[3.2.0]hept-2-en-6-one with a k cat/K M value of 49.3 mM-1 s-1.


Assuntos
Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Cânfora/metabolismo , Escherichia coli/genética , Oxigenases de Função Mista/química , Oxigenases de Função Mista/genética , Pseudomonas putida/enzimologia , Proteínas de Bactérias/metabolismo , Cânfora/química , Estabilidade Enzimática , Escherichia coli/metabolismo , Expressão Gênica , Cinética , Oxigenases de Função Mista/metabolismo , Dados de Sequência Molecular , Filogenia , Pseudomonas putida/química , Pseudomonas putida/classificação , Pseudomonas putida/genética , Especificidade por Substrato
6.
AMB Express ; 1(1): 13, 2011 Jun 23.
Artigo em Inglês | MEDLINE | ID: mdl-21906366

RESUMO

Three different Baeyer-Villiger monooxygenases (BVMOs) were reported to be involved in the camphor metabolism by Pseudomonas putida NCIMB 10007. During (+)-camphor degradation, 2,5-diketocamphane is formed serving as substrate for the 2,5-diketocamphane 1,2-monooxygenase. This enzyme is encoded on the CAM plasmid and depends on the cofactors FMN and NADH and hence belongs to the group of type II BVMOs. We have cloned and recombinantly expressed the oxygenating subunit of the 2,5-diketocamphane 1,2-monooxygenase (2,5-DKCMO) in E. coli followed by His-tag-based affinity purification. A range of compounds representing different BVMO substrate classes were then investigated, but only bicyclic ketones were converted by 2,5-DKCMO used as crude cell extract or after purification. Interestingly, also (-)-camphor was oxidized, but conversion was about 3-fold lower compared to (+)-camphor. Moreover, activity of purified 2,5-DKCMO was observed in the absence of an NADH-dehydrogenase subunit.

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