Okeanomitos corallinicola gen. and sp. nov. (Nostocales, Cyanobacteria), a new toxic marine heterocyte-forming Cyanobacterium from a coral reef.

Cyanobacterial mats supplanting coral and spreading coral diseases in tropical reefs, intensified by environmental shifts caused by human-induced pressures, nutrient enrichment, and global climate change, pose grave risks to the survival of coral ecosystems. In this study, we characterized Okeanomitos corallinicola gen. and sp. nov., a newly discovered toxic marine heterocyte-forming cyanobacterium isolated from a coral reef ecosystem of the South China Sea. Phylogenetic analysis, based on the 16S rRNA gene and the secondary structure of the 16S-23S rRNA intergenic region, placed this species in a clade distinct from closely related genera, that is, Sphaerospermopsis stricto sensu, Raphidiopsis, and Amphiheterocytum. The O. corallinicola is a marine benthic species lacking gas vesicles, distinguishing it from other members of the Aphanizomenonaceae family. The genome of O. corallinicola is large and exhibits diverse functional capabilities, potentially contributing to the resilience and adaptability of coral reef ecosystems. In vitro assays revealed that O. corallinicola demonstrates notable cytotoxic activity against various cancer cell lines, suggesting its potential as a source of novel anticancer compounds. Furthermore, the identification of residual saxitoxin biosynthesis function in the genome of O. corallinicola, a marine cyanobacteria, supports the theory that saxitoxin genes in cyanobacteria and dinoflagellates may have been horizontally transferred between them or may have originated from a shared ancestor. Overall, the identification and characterization of O. corallinicola provides valuable contributions to cyanobacterial taxonomy, offering novel perspectives on complex interactions within coral reef ecosystems.

Biogeochemical factors regulating photosynthetically dissolved organic carbon produced by phytoplankton in the Taiwan Strait.

The distribution and mechanisms of photosynthetically dissolved organic carbon (PDOC) released by marine phytoplankton are frequently neglected and inadequately understood because most studies on carbon sequestration capacity have focused on photosynthetic particulate organic carbon. In this study, percentage extracellular release (PER) and its environmental influencing factors were investigated for 10 cruises in the Taiwan Strait during 2006-2023. The results indicated that the PER increased horizontally from the nearshore to the off-shelf and vertically from the surface to the bottom within the euphotic zone. PER tends to be low in eutrophic waters such as upwellings and estuaries and high in oligotrophic waters. The study revealed that the average contribution of PDOC to total primary productivity (TPP) in the Taiwan Strait could reach 18.2 ± 11.7%, which is similar to the previously estimated global oceanic values. PDOC production satisfied approximately 25% the carbon requirements of heterotropic bacteria (HB). A detailed analysis of the PER combined with model simulations proved that the distribution of the PER in the Taiwan Strait was caused by the joint contribution of irradiance, size-fractionated phytoplankton, and nutrient stoichiometry. Our results contradict the view that the PER is a constant factor that is unaffected by TPP. However, there was a significant negative correlation between the PER and TPP. The PDOC was always lower than the bacterial carbon demand for a broad range of bacterial growth efficiencies, suggesting a weak coupling between phytoplankton exudation and bacterial metabolism. This challenges the idea that there is a well-coupled relationship between bacteria and phytoplankton present on the continental shelf. These findings indicate significant discrepancies in PDOC mechanisms and the quantitative importance of nearshore eutrophic and off-shelf oligotrophic environments. Consequently, it is unwise to use uniform PERs without differentiation under trophic conditions when reevaluating and appraising marine carbon fixation.

Natural marmatite photocatalyst for treatment of mineral processing wastewater to help zero wastewater discharge.

Mineral processing wastewater (MPW) with large discharge and high toxicity affects environmental safety, and the realizing zero discharge of MPW is of great significance for reducing environmental pollution, saving water resources, and promoting the sustainable development of the mining industry. In this study, we reported natural marmatite (NM) as a low-cost and efficient photocatalyst for the treatment of MPW to help zero wastewater discharge. The photocatalytic activity of NM was evaluated by the removal of total organic carbon (TOC) from MPW under visible-light illumination, and the optimal degradation conditions were discussed. Results showed that superoxide free radicals (·O2-) were the dominant active species responsible for organic pollutants degradation, and 74.25% TOC removal was obtained after 120 min reaction under the optimum treatment conditions. Meanwhile, the wastewater treated by NM photocatalysis can be reused in the flotation system without adverse impact on the product index. Based on these findings, a model of zero wastewater discharge for flotation with the help of photocatalytic treatment was established, it indicated that the water of the whole system can be balanced without affecting the ore dressing index, which showed that visible light-driven photocatalyst has a promising application prospect in the treatment and recycling of industrial wastewater.

Artificial intelligence optimization and controllable slow-release iron sulfide realizes efficient separation of copper and arsenic in strongly acidic wastewater.

Iron sulfide (FeS) is a promising material for separating copper and arsenic from strongly acidic wastewater due to its S2- slow-release effect. However, uncertainties arise because of the constant changes in wastewater composition, affecting the selection of operating parameters and FeS types. In this study, the aging method was first used to prepare various controllable FeS nanoparticles to weaken the arsenic removal ability without affecting the copper removal. Orthogonal experiments were conducted, and the results identified the Cu/As ratio, H2SO4 concentration, and FeS dosage as the three main factors influencing the separation efficiency. The backpropagation artificial neural network (BP-ANN) model was established to determine the relationship between the influencing factors and the separation efficiency. The correlation coefficient (R) of overall model was 0.9923 after optimizing using genetic algorithm (GA). The BP-GA model was also solved using GA under specific constraints, predicting the best solution for the separation process in real-time. The predicted results show that the high temperature and long aging time of FeS were necessary to gain high separation efficiency, and the maximum separation factor can reached 1,400. This study provides a suitable sulfurizing material and a set of methods and models with robust flexibility that can successfully predict the separation efficiency of copper and arsenic from highly acidic environments.

NLRC3 silencing accelerates the invasion of hepatocellular carcinoma cell via IL-6/JAK2/STAT3 pathway activation.

Nucleotide-binding domain, leucine-rich repeat family with a caspase activation and recruitment domain 3 (NLRC3) participates in both immunity and cancer. The aim of this study was to determine the role of NLRC3 in human hepatocellular carcinoma (HCC) and the underlying mechanisms. We collected human liver tissues from nonalcoholic steatohepatitis (NASH), HCC, and adjacent normal tissues to characterize the pattern of NLRC3 expression by real-time quantitative polymerase chain reaction and immunohistochemistry. Then, we used the HCC cell line, HuH-7, transfected with small interfering RNA to silence the NLRC3 expression. 5-Ethynyl-2'-deoxyuridine assay, scratch assay, and transwell invasion assay were used for assessing proliferation, migration, and invasion, respectively. Flow cytometry and terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL) assay were conducted to assess cell apoptosis. The expression of NLRC3 was reduced in human HCC tissues, compared with normal liver and nonalcoholic steatohepatitis tissues. After knocking down of NLRC3, the proliferation, migration, and invasion were increased in HuH-7 cells. And flow cytometry and TUNEL assay showed that HuH-7 cell apoptosis was suppressed after NLRC3 knockdown. As for the underlying mechanisms, knockdown of NLRC3 in HuH-7 cells was associated with the activation of Janus kinase 2/signal transducers and activators of transcription 3 (JAK2/STAT3) pathway under interleukin-6 (IL-6) stimulation. NLRC3 expression was downregulated in human HCC tissues. NLRC3 silencing in HuH-7 cells can promote the proliferation, migration, and invasion of hepatocellular carcinoma cells. JAK2/STAT3 pathway activation induced by IL-6 may be the underlying mechanism for HCC when NLRC3 expression is silenced. And the invasion of HuH-7 cells was partially suppressed by the STAT3 specific inhibitor (cryptotanshinone). Therefore, NLRC3 may play a significant role in HCC and might be a therapeutic target for the treatment of HCC.

Assessing the global distribution and risk of harmful microalgae: A focus on three toxic Alexandrium dinoflagellates.

Harmful dinoflagellates and their resulting blooms pose a threat to marine life and human health. However, to date, global maps of marine life often overlook harmful microorganisms. As harmful algal blooms (HABs) increase in frequency, severity, and extent, understanding the distribution of harmful dinoflagellates and their drivers is crucial for their management. We used MaxEnt, random forest, and ensemble models to map the habitats of the representative HABs species in the genus Alexandrium, including A. catenella, A. minutum, and A. pacificum. Since species occurrence records used in previous studies were solely morphology-based, potentially leading to misidentifications, we corrected these species' distribution records using molecular criteria. The results showed that the key environmental drivers included the distance to the coastline, bathymetry, sea surface temperature (SST), and dissolved oxygen. Alexandrium catenella thrives in temperate to cold zones and is driven by low SST and high oxygen levels. Alexandrium pacificum mainly inhabits the Temperate Northern Pacific and prefers warmer SST and lower oxygen levels. Alexandrium minutum thrives universally and adapts widely to SST and oxygen. By analyzing the habitat suitability of locations with recorded HAB occurrences, we found that high habitat suitability could serve as a reference indicator for bloom risk. Therefore, we have proposed a qualitative method to spatially assess the harmful algae risk according to the habitat suitability. On the global risk map, coastal temperate seas, such as the Mediterranean, Northwest Pacific, and Southern Australia, faced higher risks. Although HABs currently have restricted geographic distributions, our study found these harmful algae possess high environmental tolerance and can thrive across diverse habitats. HAB impacts could increase if climate changes or ocean conditions became more favorable. Marine transportation may also spread the harmful algae to new unaffected ecosystems. This study has pioneered the assessment of harmful algal risk based on habitat suitability.

Latitudinal and meridional patterns of picophytoplankton variability are contrastingly associated with Ekman pumping and the warm pool in the tropical western Pacific.

Marine picophytoplankton plays a major role in marine cycling and energy conversion, and its effects on the carbon cycle and global climate change have been well documented. In this study, we investigated the response of picophytoplankton across a broad range of physicochemical conditions in two distinct regions of the tropical western Pacific. Our analysis considered the abundance, carbon biomass, size fraction, distribution, and regulatory factors of the picophytoplankton community, which included the cyanobacteria Prochlorococcus and Synechococcus, and small eukaryotic phytoplankton (picoeukaryotes). The first region was a latitudinal transect along the equator (142-163° E, 0° N), characterized by stratified oligotrophic conditions. The second region was a meridional transect (143° E, 0-22° N) known for its high-nutrient and low-chlorophyll (HNLC) conditions. Results showed that picophytoplankton contributed >80% of the chlorophyll a (Chl a), and was mainly distributed above 100 m. Prochlorococcus was the dominant organism in terms of cell abundance and estimated carbon biomass in both latitudinal and meridional transects, followed by Synechococcus and picoeukaryotes. In the warm pool, Prochlorococcus was primarily distributed below the isothermal layer, with the maximum subsurface abundance forming below it. The maximum Synechococcus abundance was restricted to the west-warm pool, due to the high temperature, and the second-highest Synechococcus abundance was associated with frontal interaction between the east-warm pool and the westward advance of Middle East Pacific water. In contrast, picoeukaryotes formed a maximum subsurface abundance corresponding to the subsurface Chl a maximum. In the mixed HNLC waters, the cell abundance and biomass of the three picophytoplankton groups were slightly lower than those in the warm pool. Due to a cyclonic eddy, the contours of the maximum subsurface Prochlorococcus abundance were uplifted, evidently with a lower value than the surrounding water. Synechococcus abundance varied greatly in patches, forming a weakly high subsurface peak when the isothermal layer rose to the near-surface (<50 m). The subsurface maximum picoeukaryote abundance was also highly consistent with that of the subsurface Chl a maximum. Correlation analysis and generalized additive models of environmental factors showed that nutrient availability had a two-faceted role in regulating the spatial patterns of picophytoplankton in diverse latitudinal and meridional environments. We concluded through regression that temperature and light irradiance were the key determinants of picophytoplankton variability in the tropical western Pacific. This study provides insights into the changing picophytoplankton community structure with potential future changing hydroclimatic force.

Understanding the Evolution of Government Attention in Response to COVID-19 in China: A Topic Modeling Approach.

The effective control over the outbreak of COVID-19 in China showcases a prompt government response, in which, however, the allocation of attention, as an essential parameter, remains obscure. This study is designed to clarify the evolution of the Chinese government's attention in tackling the pandemic. To this end, 674 policy documents issued by the State Council of China are collected to establish a text corpus, which is then used to extract policy topics by applying the latent dirichlet allocation (LDA) model, a topic modelling approach. It is found that the response policies take different tracks in a four-stage controlling process, and five policy topics are identified as major government attention areas in all stages. Moreover, a topic evolution path is highlighted to show internal relationships between different policy topics. These findings shed light on the Chinese government's dynamic response to the pandemic and indicate the strength of applying adaptive governance strategies in coping with public health emergencies.

Identification of Three Significant Genes Associated with Immune Cells Infiltration in Dysfunctional Adipose Tissue-Induced Insulin-Resistance of Obese Patients via Comprehensive Bioinformatics Analysis.

BACKGROUND: Low-grade chronic inflammation in dysfunctional adipose tissue links obesity with insulin resistance through the activation of tissue-infiltrating immune cells. Numerous studies have reported on the pathogenesis of insulin-resistance. However, few studies focused on genes from genomic database. In this study, we would like to explore the correlation of genes and immune cells infiltration in adipose tissue via comprehensive bioinformatics analyses and experimental validation in mice and human adipose tissue. METHODS: Gene Expression Omnibus (GEO) datasets (GSE27951, GSE55200, and GSE26637) of insulin-resistant individuals or type 2 diabetes patients and normal controls were downloaded to get differently expressed genes (DEGs), and GO and KEGG pathway analyses were performed. Subsequently, we integrated DEGs from three datasets and constructed commonly expressed DEGs' PPI net-works across datasets. Center regulating module of DEGs and hub genes were screened through MCODE and cytoHubba in Cytoscape. Three most significant hub genes were further analyzed by GSEA analysis. Moreover, we verified the predicted hub genes by performing RT qPCR analysis in animals and human samples. Besides, the relative fraction of 22 immune cell types in adipose tissue was detected by using the deconvolution algorithm of CIBERSORT (Cell Type Identification by Estimating Relative Subsets of RNA Transcripts). Furthermore, based on the significantly changed types of immune cells, we performed correlation analysis between hub genes and immune cells. And, we performed immunohistochemistry and immunofluorescence analysis to verify that the hub genes were associated with adipose tissue macrophages (ATM). RESULTS: Thirty DEGs were commonly expressed across three datasets, most of which were upregulated. DEGs mainly participated in the process of multiple immune cells' infiltration. In protein-protein interaction network, we identified CSF1R, C1QC, and TYROBP as hub genes. GSEA analysis suggested high expression of the three hub genes was correlated with immune cells functional pathway's activation. Immune cell infiltration and correlation analysis revealed that there were significant positive correlations between TYROBP and M0 macrophages, CSF1R and M0 macrophages, Plasma cells, and CD8 T cells. Finally, hub genes were associated with ATMs infiltration by experimental verification. CONCLUSIONS: This article revealed that CSF1R, C1QC, and TYROBP were potential hub genes associated with immune cells' infiltration and the function of proinflammation, especially adipose tissue macrophages, in the progression of obesity-induced diabetes or insulin-resistance.

Screening of potential biomarkers in the occurrence and development of type 1 diabetes mellitus based on transcriptome analysis.

INTRODUCTION: The aim of the study was to reveal the mechanisms for the pathogenesis and progression of type 1 diabetes mellitus (T1DM). MATERIAL AND METHODS: Two mRNA expression profiles and two miRNA expression profiles were downloaded from the Gene Expression Omnibus (GEO) database. The differentially expressed genes (DEGs), differentially expressed miRNAs (DEMs), functional enrichment analyses, pathways, putative targets for DEMs and the miRNA-gene pairs, protein-protein pairs of DEGs, and PPI network were constructed. RESULTS: Based on mRNA expression profiles, 37 and 110 DEGs were identified, and named as DEGs-short and DEGs-long, respectively. Based on miRNA expression profiles, 15 and six DEMs were identified, and named as DEMs-short and DEMs-long, respectively. DEGs-short were enriched in six GO terms and four pathways, and DEGs-long enriched in 40 GO terms and 10 pathways. Seventeen miRNA-gene pairs for DEMs-short were screened out; hisa-miR-181a and hisa-miR-181c were involved in the most pairs. Twenty pairs for DEMs-long were obtained; hsa-miR-338-3p was involved in all the pairs. KLRD1 was involved in more pairs in the network of DEGs-short. ACTA2 and USP9Y were involved in more pairs in the network of DEGs-long. CONCLUSIONS: KLRD1, hisa-miR-181a, and hisa-miR-181c might be pathogenic biomarkers for T1DM, ACTA2, USP9Y, and hsa-miR-338-3p progressive biomarkers of T1DM.

Efficient utilisation of flue gas desulfurization gypsum as a potential material for fluoride removal.

This study introduces the use of a waste by-product from wet limestone flue gas desulfurization as a potential material for fluoride removal. Systematic laboratory-scale experiments were tested to identify the fluoride removal performance and determine the underlying mechanism. Flue gas desulfurization (FGD) gypsum removes 93.31% of fluoride from 109 mg/L to 7.3 mg/L. Fluoride can be efficiently removed at the optimum pH range of 5-11. Kinetics analysis indicates that the theoretical fluoride capacity at 1 g/L FGD gypsum is 96.9 mg/g. Equilibrium speciation analysis indicates that the decrease of system pH to lower than 5 is unsuitable for the formation of calcium fluoride, and the increase of system pH to higher than 11 opposes calcium release from FGD gypsum. Thermodynamic analysis confirms the feasibility of converting calcium sulphate into calcium fluoride at pH > 5. FGD gypsum and precipitates were characterized to describe their surface morphology, elemental composition and crystalline phase. Results indicate that FGD gypsum removes fluoride through the combination of calcium with fluoride to generate calcium fluoride.

Characteristics of phytoplankton communities and their biomass variation in a gas hydrate drilling area in the northern South China Sea.

We analyzed the data obtained from field observations on a gas hydrate drilling area in Dongsha of northern South China Sea (SCS) in middle May (before drilling) and early October (after drilling) in 2013. The variation in the phytoplankton communities and biomass as well as the impacts of environmental factors including dissolved methane was studied. Results indicated that the gas hydrate drilling area in Dongsha, SCS exhibited a typical low-nutrients low-chlorophyll a (LNLC) environment accompanied with low phytoplankton abundance. A total of 103 taxa belonging to 52 genera of 5 classes were identified, with diatoms and dinoflagellates dominating the community. Both phytoplankton abundance and chlorophyll a (Chl a) were highest at the subsurface maximum layer. The subsurface chlorophyll maximum (SCM) before and after drilling were stabilized at 75 m (0.30 ±â€¯0.06 mg/m3 and 0.51 ±â€¯0.29 mg/m3, respectively), while the subsurface maximum of abundance after drilling went deeper to 75 m (604.17 ±â€¯313.22 cells/L) from the surface (707.14 ±â€¯243.98 cells/L) before drilling. After drilling, phosphate and Chl a increased significantly, but no significant differences were observed on abundance. Dominant species of diatoms were basically constant with dinoflagellates becoming more apparent in higher occurrence and abundance, while Cyanophyta was diverse after drilling. Redundancy analysis (RDA) and Spearman's correlation analysis both indicated that temperature, pH and phosphates were major factors causing fluctuation in phytoplankton community structure, while dissolved methane had non-significant impact directly. We clearly found both abundance and Chl a increased in particular water layers (between 50 and 75 m) and at stations (DS06, DS08 and DS15) where dissolved methane concentrations were also abnormally high. This study appeared to partly coincide with the findings of natural oil seeps in the Gulf of Mexico, which assumed that the turbulence from the natural oil and gas leaking zone could raise the bottom water through the rising bubbles and bring cold nutrient rich waters to the thermocline from the deep seeps. This plume-generated upwelling could then fuel a bottom-up effect on the photosynthetic species in the upper pelagic waters within the euphotic zone.

The utilization of waste by-products for removing silicate from mineral processing wastewater via chemical precipitation.

This study investigates an environmentally friendly technology that utilizes waste by-products (waste acid and waste alkali liquids) to treat mineral processing wastewater. Chemical precipitation is used to remove silicate from scheelite (CaWO4) cleaning flotation wastewater and the waste by-products are used as a substitute for calcium chloride (CaCl2). A series of laboratory experiments is conducted to explain the removal of silicate and the characterization and formation mechanism of calcium silicate. The results show that silicate removal reaches 90% when the Ca:Si molar ratio exceeds 1.0. The X-ray diffraction (XRD) results confirm the characterization and formation of calcium silicate. The pH is the key factor for silicate removal, and the formation of polysilicic acid with a reduction of pH can effectively improve the silicate removal and reduce the usage of calcium. The economic analysis shows that the treatment costs with waste acid (0.63 $/m3) and waste alkali (1.54 $/m3) are lower than that of calcium chloride (2.38 $/m3). The efficient removal of silicate is confirmed by industrial testing at a plant. The results show that silicate removal reaches 85% in the recycled water from tailings dam.