Detalhe da pesquisa
1.
Single-molecule footprinting identifies context-dependent regulation of enhancers by DNA methylation.
Mol Cell
; 83(5): 787-802.e9, 2023 03 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-36758546
2.
BANP opens chromatin and activates CpG-island-regulated genes.
Nature
; 596(7870): 133-137, 2021 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-34234345
3.
Cofactors: a new layer of specificity to enhancer regulation.
Trends Biochem Sci
; 47(12): 993-995, 2022 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-35970663
4.
Genome-wide Single-Molecule Footprinting Reveals High RNA Polymerase II Turnover at Paused Promoters.
Mol Cell
; 67(3): 411-422.e4, 2017 Aug 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-28735898
5.
Studying transcription factor function in the genome at molecular resolution.
Trends Genet
; 37(9): 798-806, 2021 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-33892959
6.
CG dinucleotides enhance promoter activity independent of DNA methylation.
Genome Res
; 29(4): 554-563, 2019 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-30709850
7.
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation.
Nature
; 520(7546): 243-7, 2015 Apr 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-25607372
8.
SAGA and ATAC histone acetyl transferase complexes regulate distinct sets of genes and ATAC defines a class of p300-independent enhancers.
Mol Cell
; 44(3): 410-423, 2011 Nov 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-22055187
9.
Cis-regulatory landscapes of four cell types of the retina.
Nucleic Acids Res
; 45(20): 11607-11621, 2017 Nov 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-29059322
10.
The ATAC acetyl transferase complex controls mitotic progression by targeting non-histone substrates.
EMBO J
; 29(14): 2381-94, 2010 Jul 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-20562830
11.
seqMINER: an integrated ChIP-seq data interpretation platform.
Nucleic Acids Res
; 39(6): e35, 2011 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-21177645
12.
Relevance of DNA methylation at enhancers for the acquisition of cell identities.
FEBS Lett
; 597(14): 1805-1817, 2023 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-37343149
13.
H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells.
BMC Genomics
; 13: 424, 2012 Aug 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-22920947
14.
ATAC and Mediator coactivators form a stable complex and regulate a set of non-coding RNA genes.
EMBO Rep
; 11(7): 541-7, 2010 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-20508642
15.
DNA sequence and chromatin modifiers cooperate to confer epigenetic bistability at imprinting control regions.
Nat Genet
; 54(11): 1702-1710, 2022 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-36333500
16.
Genome-wide quantification of transcription factor binding at single-DNA-molecule resolution using methyl-transferase footprinting.
Nat Protoc
; 16(12): 5673-5706, 2021 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-34773120
17.
A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity.
Nat Commun
; 11(1): 2680, 2020 05 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-32471981
18.
Targeting neuronal and glial cell types with synthetic promoter AAVs in mice, non-human primates and humans.
Nat Neurosci
; 22(8): 1345-1356, 2019 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-31285614
19.
High-throughput engineering of a mammalian genome reveals building principles of methylation states at CG rich regions.
Elife
; 3: e04094, 2014 Sep 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-25259795
20.
Interpreting and visualizing ChIP-seq data with the seqMINER software.
Methods Mol Biol
; 1150: 141-52, 2014.
Artigo
em Inglês
| MEDLINE | ID: mdl-24743995