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1.
Mol Phylogenet Evol ; 162: 107184, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-33932615

RESUMO

African amphibian diversity remains underestimated with many cryptic lineages awaiting formal description. An important hotspot of amphibian diversification is the Guineo-Congolian rainforest in Central Africa, its richness attributable to present day and ancestral range fragmentation through geological barriers, habitat expansion and contraction, and the presence of steep ecological gradients. The charismatic Nectophryne tree toads present an interesting case study for diversification in this region. The two formally described species comprising this genus show nearly identical geographic distributions extending across most of the Guineo-Congolian rainforest, but show little morphological disparity. Both species harbour extensive genetic diversity warranting taxonomic revisions, and interestingly, when comparing the subclades within each, the two species show remarkably parallel diversification histories, both in terms of timing of phylogenetic splits and their geographic distributions. This indicates that common processes may have shaped the evolutionary history of these lineages.


Assuntos
Bufonidae/genética , Filogenia , Filogeografia , Floresta Úmida , Animais , Feminino , Masculino
2.
Mol Phylogenet Evol ; 146: 106771, 2020 05.
Artigo em Inglês | MEDLINE | ID: mdl-32087330

RESUMO

Narrow-mouthed frogs (Anura: Microhylidae) are globally distributed and molecular data suggest the rapid evolution of multiple subfamilies shortly after their origin. Despite recent progress, several subfamilial relationships remain unexplored using phylogenomic data. We analysed 1,796 nuclear ultraconserved elements, a total matrix of 400,664 nucleotides, from representatives of most microhylid subfamilies. Summary method species-tree and maximum likelihood analyses unambiguously supported Hoplophryninae as the earliest diverging microhylid and confirm Chaperininae as a junior synonym of Microhylinae. Given the emerging consensus that subfamilies from mainland Africa diverged early, microhylids have likely occupied the continent for more than 66 million years.


Assuntos
Anuros/classificação , África , Animais , Anuros/genética , Sequência de Bases , Núcleo Celular/genética , Sequência Conservada , Marcadores Genéticos , Filogenia
3.
Syst Biol ; 68(6): 859-875, 2019 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-31140573

RESUMO

Theory predicts that sexually dimorphic traits under strong sexual selection, particularly those involved with intersexual signaling, can accelerate speciation and produce bursts of diversification. Sexual dichromatism (sexual dimorphism in color) is widely used as a proxy for sexual selection and is associated with rapid diversification in several animal groups, yet studies using phylogenetic comparative methods to explicitly test for an association between sexual dichromatism and diversification have produced conflicting results. Sexual dichromatism is rare in frogs, but it is both striking and prevalent in African reed frogs, a major component of the diverse frog radiation termed Afrobatrachia. In contrast to most other vertebrates, reed frogs display female-biased dichromatism in which females undergo color transformation, often resulting in more ornate coloration in females than in males. We produce a robust phylogeny of Afrobatrachia to investigate the evolutionary origins of sexual dichromatism in this radiation and examine whether the presence of dichromatism is associated with increased rates of net diversification. We find that sexual dichromatism evolved once within hyperoliids and was followed by numerous independent reversals to monochromatism. We detect significant diversification rate heterogeneity in Afrobatrachia and find that sexually dichromatic lineages have double the average net diversification rate of monochromatic lineages. By conducting trait simulations on our empirical phylogeny, we demonstrate that our inference of trait-dependent diversification is robust. Although sexual dichromatism in hyperoliid frogs is linked to their rapid diversification and supports macroevolutionary predictions of speciation by sexual selection, the function of dichromatism in reed frogs remains unclear. We propose that reed frogs are a compelling system for studying the roles of natural and sexual selection on the evolution of sexual dichromatism across micro- and macroevolutionary timescales.


Assuntos
Anuros/classificação , Filogenia , Pigmentação , África , Animais , Anuros/fisiologia , Evolução Biológica , Feminino , Masculino , Caracteres Sexuais
4.
Mol Ecol ; 27(21): 4289-4308, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-30193397

RESUMO

High-throughput sequencing data have greatly improved our ability to understand the processes that contribute to current biodiversity patterns. The "vanishing refuge" diversification model is speculated for the coastal forests of eastern Africa, whereby some taxa have persisted and diversified between forest refugia, while others have switched to becoming generalists also present in non-forest habitats. Complex arrangements of geographical barriers (hydrology and topography) and ecological gradients between forest and non-forest habitats may have further influenced the region's biodiversity, but elucidation of general diversification processes has been limited by lack of suitable data. Here, we explicitly test alternative diversification modes in the coastal forests using genome-wide single nucleotide polymorphisms, mtDNA, spatial and environmental data for three forest (Arthroleptis xenodactyloides, Leptopelis flavomaculatus and Afrixalus sylvaticus) and four generalist (Afrixalus fornasini, A. delicatus, Leptopelis concolor and Leptopelis argenteus) amphibians. Multiple analyses provide insight about divergence times, spatial population structure, dispersal barriers, environmental stability and demographic history. We reveal highly congruent intra-specific diversity and population structure across taxa, with most divergences occurring during the late Pliocene and Pleistocene. Although stability models support the existence of some forest refugia, dispersal barriers and demographic models point towards idiosyncratic diversification modes across taxa. We identify a consistent role for riverine barriers in the diversification of generalist taxa, but mechanisms of diversification are more complex for forest taxa and potentially include topographical barriers, forest refugia and ecological gradients. Our work demonstrates the complexity of diversification processes in this region, which vary between forest and generalist taxa, but also for ecologically similar species with shared population boundaries.


Assuntos
Anuros/classificação , Evolução Biológica , Florestas , Refúgio de Vida Selvagem , África Oriental , Animais , Biodiversidade , DNA Mitocondrial/genética , Genética Populacional , Modelos Genéticos
5.
Proc Biol Sci ; 284(1851)2017 Mar 29.
Artigo em Inglês | MEDLINE | ID: mdl-28356450

RESUMO

How evolutionary novelties evolve is a major question in evolutionary biology. It is widely accepted that changes in environmental conditions shift the position of selective optima, and advancements in phylogenetic comparative approaches allow the rigorous testing of such correlated transitions. A longstanding question in vertebrate biology has been the evolution of terrestrial life histories in amphibians and here, by investigating African bufonids, we test whether terrestrial modes of reproduction have evolved as adaptations to particular abiotic habitat parameters. We reconstruct and date the most complete species-level molecular phylogeny and estimate ancestral states for reproductive modes. By correlating continuous habitat measurements from remote sensing data and locality records with life-history transitions, we discover that terrestrial modes of reproduction, including viviparity evolved multiple times in this group, most often directly from fully aquatic modes. Terrestrial modes of reproduction are strongly correlated with steep terrain and low availability of accumulated water sources. Evolutionary transitions to terrestrial modes of reproduction occurred synchronously with or after transitions in habitat, and we, therefore, interpret terrestrial breeding as an adaptation to these abiotic conditions, rather than an exaptation that facilitated the colonization of montane habitats.


Assuntos
Bufonidae/fisiologia , Meio Ambiente , Reprodução , Animais , Evolução Biológica , Filogenia
6.
Mol Phylogenet Evol ; 114: 261-270, 2017 09.
Artigo em Inglês | MEDLINE | ID: mdl-28684366

RESUMO

Ecological niche models (ENMs) have been used in a wide range of ecological and evolutionary studies. In biogeographic studies these models have, among other things, helped in the discovery of new allopatric populations, and even new species. However, small sample sizes and questionable taxonomic delimitation can challenge models, often decreasing their accuracy. Herein we examine the sensitivity of ENMs to the addition of new, geographically isolated populations, and the impact of applying different taxonomic delimitations. The East African reed frog Hyperolius substriatus Ahl, 1931 was selected as a case study because it has been the subject of previous ENM predictions. Our results suggest that addition of new data and reanalysis of species lineages of H. substriatus improved our understanding of the evolutionary history of this group of frogs. ENMs provided robust predictions, even when some populations were deliberately excluded from the models. Splitting the lineages based on genetic relationships and analysing the ENMs separately provided insights about the biogeographical processes that led to the current distribution of H. substriatus.


Assuntos
Anuros/classificação , África Oriental , Animais , Anuros/genética , Evolução Biológica , DNA/química , DNA/isolamento & purificação , DNA/metabolismo , Ecologia , Fluxo Gênico , Ligação Genética , Filogenia , Filogeografia , Pró-Proteína Convertases/classificação , Pró-Proteína Convertases/genética , Proteínas Proto-Oncogênicas c-myc/classificação , Proteínas Proto-Oncogênicas c-myc/genética , RNA Ribossômico 16S/classificação , RNA Ribossômico 16S/genética , Análise de Sequência de DNA
7.
Mol Phylogenet Evol ; 99: 89-102, 2016 06.
Artigo em Inglês | MEDLINE | ID: mdl-27001603

RESUMO

The phylogenetic relationships of the African mongrel frog genus Nothophryne are poorly understood. We provide the first molecular assessment of the phylogenetic position of, and diversity within, this monotypic genus from across its range-the Afromontane regions of Malawi and Mozambique. Our analysis using a two-tiered phylogenetic approach allowed us to place the genus in Pyxicephalidae. Within the family, Nothophryne grouped with Tomopterna, a hypothesis judged significantly better than alternative hypotheses proposed based on morphology. Our analyses of populations across the range of Nothophryne suggest the presence of several cryptic species, at least one species per mountain. Formal recognition of these species is pending but there is a major conservation concern for these narrowly distributed populations in an area impacted by major habitat change. The phylogenetic tree of pyxicephalids is used to examine evolution of life history, ancestral habitat, and biogeography of this group.


Assuntos
Anuros/classificação , Variação Genética , Filogenia , Animais , Cruzamento , Ecossistema , Geografia , Modelos Teóricos , Moçambique , Especificidade da Espécie , Fatores de Tempo
8.
BMC Evol Biol ; 15: 128, 2015 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-26126573

RESUMO

BACKGROUND: Peripatric speciation and peripheral isolation have uncertain importance in species accumulation, and are largely overshadowed by assumed dominance of allopatric modes of speciation. Understanding the role of different speciation mechanisms within biodiversity hotspots is central to understanding the generation of biological diversity. Here, we use a phylogeographic analysis of the spiny-throated reed frogs and examine sister pairings with unbalanced current distributional ranges for characteristics of peripatric speciation. We further investigate whether forest/grassland mosaic adapted species are more likely created through peripatric speciation due to instability of this habitat type. RESULTS: We reconstructed a multi-locus molecular phylogeny of spiny-throated reed frogs which we then combined with comparative morphologic data to delimit species and analyze historical demographic change; identifying three new species. Three potential peripatric speciation events were identified along with one case of allopatric speciation. Peripatric speciation is supported through uneven potential and realized distributions and uneven population size estimates based on field collections. An associated climate shift was observed in most potentially peripatric splits. Morphological variation was highest in sexually dimorphic traits such as body size and gular shape, but this variation was not limited to peripatric species pairs as hypothesized. The potentially allopatric species pair showed no niche shifts and equivalent effective population sizes, ruling out peripatry in that speciation event. Two major ecological niche shifts were recovered within this radiation, possibly as adaptations to occupy areas of grassland that became more prevalent in the last 5 million years. Restricted and fluctuating grassland mosaics within forests might promote peripatric speciation in the Eastern Arc Biodiversity Hotspot (EABH). CONCLUSIONS: In our case study, peripatric speciation appears to be an important driver of diversity within the EABH biodiversity hotspot, implying it could be a significant speciation mechanism in highly fragmented ecosystems. Extensive peripatric speciation in this montane archipelago may explain the abundance of discrete lineages within the limited area of the EABH, as inferred in remote island archipelagos. Future phylogenetic studies incorporating demographic and spatial analyses will clarify the role of peripatric speciation in creating biodiversity hotspots.


Assuntos
Anuros/classificação , Anuros/genética , África Oriental , Animais , Biodiversidade , Clima , Ecossistema , Feminino , Masculino , Filogenia , Filogeografia
9.
BMC Evol Biol ; 14(1): 44, 2014 Mar 10.
Artigo em Inglês | MEDLINE | ID: mdl-24612655

RESUMO

BACKGROUND: The phylogenetic relationships of many taxa remain poorly known because of a lack of appropriate data and/or analyses. Despite substantial recent advances, amphibian phylogeny remains poorly resolved in many instances. The phylogenetic relationships of the Ethiopian endemic monotypic genus Ericabatrachus has been addressed thus far only with phenotypic data and remains contentious. RESULTS: We obtained fresh samples of the now rare and Critically Endangered Ericabatrachus baleensis and generated DNA sequences for two mitochondrial and four nuclear genes. Analyses of these new data using de novo and constrained-tree phylogenetic reconstructions strongly support a close relationship between Ericabatrachus and Petropedetes, and allow us to reject previously proposed alternative hypotheses of a close relationship with cacosternines or Phrynobatrachus. CONCLUSIONS: We discuss the implications of our results for the taxonomy, biogeography and conservation of E. baleensis, and suggest a two-tiered approach to the inclusion and analyses of new data in order to assess the phylogenetic relationships of previously unsampled taxa. Such approaches will be important in the future given the increasing availability of relevant mega-alignments and potential framework phylogenies.


Assuntos
Anuros/classificação , Anuros/genética , Evolução Biológica , Animais , Espécies em Perigo de Extinção , Filogeografia , Análise de Sequência de DNA
10.
Mol Phylogenet Evol ; 73: 177-89, 2014 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-24480323

RESUMO

We analyze mitochondrial genomes to reconstruct a robust phylogenetic framework for caecilian amphibians and use this to investigate life-history evolution within the group. Our study comprises 45 caecilian mitochondrial genomes (19 of them newly reported), representing all families and 27 of 32 currently recognized genera, including some for which molecular data had never been reported. Support for all relationships in the inferred phylogenetic tree is high to maximal, and topology tests reject all investigated alternatives, indicating an exceptionally robust molecular phylogenetic framework of caecilian evolution consistent with current morphology-based supraspecific classification. We used the mitogenomic phylogenetic framework to infer ancestral character states and to assess correlation among three life-history traits (free-living larvae, viviparity, specialized pre-adult or vernal teeth), each of which occurs only in some caecilian species. Our results provide evidence that an ancestor of the Seychelles caecilians abandoned direct development and re-evolved a free-living larval stage. This study yields insights into the concurrent evolution of direct development and of vernal teeth in an ancestor of Teresomata that likely gave rise to skin-feeding (maternal dermatophagy) behavior and subsequently enabled evolution of viviparity, with skin feeding possibly a homologous precursor of oviduct feeding in viviparous caecilians.


Assuntos
Anfíbios/classificação , Anfíbios/genética , Evolução Biológica , Genoma Mitocondrial/genética , Anfíbios/crescimento & desenvolvimento , Animais , Evolução Molecular , Comportamento Alimentar , Feminino , Larva/genética , Larva/fisiologia , Oviductos , Filogenia , Seicheles , Pele , Viviparidade não Mamífera
11.
Mol Phylogenet Evol ; 71: 261-73, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24239613

RESUMO

Torrent frogs of the genus Petropedetes Reichenow, 1874 as currently understood have a disjunct distribution with species endemic to West, Central or East Africa. We herein present a phylogenetic analysis including all but one of the currently described 12 species of the genus. Maximum Likelihood and Bayesian analyses of combined nuclear (rag1, SIA, BDNF) and mitochondrial (16S, 12S, cytb) genes of more than 3500 base pairs, revealed clades corresponding to the three sub-Saharan regions. Molecular results are confirmed by morphological differences. Surprisingly, the three geographic clades do not form a monophyletic group with respect to closely related families Pyxicephalidae and Conrauidae and therefore require taxonomic changes. We resurrect Arthroleptides Nieden, 1911 for the East African taxa. The Central African taxa remain in the genus Petropedetes. The West African members are placed in the new genus Odontobatrachus gen. nov. The taxonomic position of the new genus remains incertae sedis as it was not assigned to any of the four families included in our analyses. Potential new species have been detected within all three major clades, pointing to a still not fully clarified diversity within African torrent frogs.


Assuntos
Anuros/genética , Filogenia , África , Animais , Anuros/classificação , Teorema de Bayes , DNA Mitocondrial/genética , Evolução Molecular , Funções Verossimilhança , Filogeografia , Análise de Sequência de DNA
12.
Mol Phylogenet Evol ; 80: 125-36, 2014 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-25109650

RESUMO

The Eastern Afromontane Region (EAR) contains numerous endemic species, yet its reptile diversity remains relatively poorly understood. We used molecular data to examine species diversity of the Sub-Saharan chameleon genus Trioceros. In particular, we focus on establishing species boundaries for taxa with disjunct distributions across the fragmented mountains of the EAR, including T. affinis, T. balebicornutus, T. deremensis, T. harennae, T. tempeli and T. werneri. We applied three species-delimiting approaches, General Mixed Yule-Coalescent (GMYC), a Bayesian implementation of the GMYC, and Bayes Factor Delimitation to estimate species diversity. Using a dated phylogeny, we also examined spatial and temporal diversification patterns in Trioceros. We found strong congruence between different species delimitation approaches, with all methods suggesting that species diversity is currently underestimated. In particular, T. werneri consists of at least four candidate species (i.e. species awaiting description) with some mountain ranges (Uluguru and Udzungwa) having potentially more than one species. Most interspecific divergences between extant Trioceros lineages are estimated to be >5Mya, consistent with a Pliocene origin of the endemic montane fauna, as exhibited in other taxonomic groups. Multiple, overlapping geographic events (climate and/or geomorphological changes) might account for speciation patterns in Trioceros given the dating results.


Assuntos
Evolução Biológica , Lagartos/classificação , Filogenia , África Subsaariana , Animais , Teorema de Bayes , Clima , Funções Verossimilhança , Lagartos/genética , Modelos Genéticos , Análise de Sequência de DNA
13.
Front Zool ; 11(1): 8, 2014 Feb 03.
Artigo em Inglês | MEDLINE | ID: mdl-24485269

RESUMO

BACKGROUND: Higher-level systematics in amphibians is relatively stable. However, recent phylogenetic studies of African torrent-frogs have uncovered high divergence in these phenotypically and ecologically similar frogs, in particular between West African torrent-frogs versus Central (Petropedetes) and East African (Arthroleptides and Ericabatrachus) lineages. Because of the considerable molecular divergence, and external morphology of the single West African torrent-frog species a new genus was erected (Odontobatrachus). In this study we aim to clarify the systematic position of West African torrent-frogs (Odontobatrachus). We determine the relationships of torrent-frogs using a multi-locus, nuclear and mitochondrial, dataset and include genera of all African and Asian ranoid families. Using micro-tomographic scanning we examine osteology and external morphological features of West African torrent-frogs to compare them with other ranoids. RESULTS: Our analyses reveal Petropedetidae (Arthroleptides, Ericabatrachus, Petropedetes) as the sister taxon of the Pyxicephalidae. The phylogenetic position of Odontobatrachus is clearly outside Petropedetidae, and not closely related to any other ranoid family. According to our time-tree estimation Odontobatrachus has been separated from other frog lineages since the Cretaceous (90.1 Ma; confidence interval: 84.2-97.1 Ma). Along with this molecular evidence, osteological and external diagnostic characters recognize West African torrent-frogs as distinct from other ranoids and provide strong support for the necessity of the recognition of a new family of frogs. This is the only endemic vertebrate family occurring in the Upper Guinea biodiversity hotspot. CONCLUSION: Based on molecular and morphological distinctiveness, the West African torrent-frog Odontobatrachus natator is allocated to a newly described anuran family. The discovery of an endemic vertebrate family in West Africa highlights the Upper Guinean forests as an outstanding, but highly endangered biodiversity hotspot.

14.
Zootaxa ; 3793: 165-87, 2014 Apr 28.
Artigo em Inglês | MEDLINE | ID: mdl-24870159

RESUMO

An investigation of name-bearing types and other relevant type specimens of twelve nominal Leptopelis taxa described from or distributed in the Eastern Arc Mountains in East Africa was carried out. Our aim was to clarify their status and where necessary revise respective nomina. We suggest several nomenclatural and taxonomic actions: 1) Leptopelis barbouri Ahl, 1929 is transferred to the synonymy of Leptopelis flavomaculatus (Günther, 1864) as a junior subjective synonym; 2) Leptopelis grandiceps Ahl, 1929 is resurrected from the synonymy of Leptopelis uluguruensis Barbour & Loveridge, 1928 as a valid species conforming to the tree frogs which have been known as 'L. barbouri' and a lectotype is designated; 3) Leptopelis usambarae Ahl, 1929 is transferred from the synonymy of L. uluguruensis Barbour & Loveridge, 1928 to the synonymy of L. grandiceps Ahl, 1929 as a subjective synonym; 4) a lectotype of Leptopelis amaniensis Ahl, 1929 (synonym of L. uluguruensis), Hylambates johnstoni Boulenger, 1897 (synonym of L. flavomaculatus) and Leptopelis signifer Ahl, 1929 (synonym of L. vermiculatus) is designated to stabilize identity of the nomina; and 5) the type locality of Leptopelis martiensseni Ahl, 1929 and Leptopelis tanganus Ahl, 1929 is corrected.


Assuntos
Ranidae/classificação , Ranidae/fisiologia , África Oriental , Animais , Demografia , Feminino , Masculino , Ranidae/anatomia & histologia , Especificidade da Espécie
15.
Zootaxa ; 3765: 29-53, 2014 Feb 14.
Artigo em Inglês | MEDLINE | ID: mdl-24870883

RESUMO

We describe and compare the tadpoles of nine Leptodactylodon species from Cameroon. The tadpoles of Leptodactylodon bicolor, L. mertensi, L. ovatus, L. perreti and L. ventrimarmoratus are herein reinvestigated, partly based on larger series than previously available. In addition we present first descriptions for the tadpoles of L. boulengeri, L. erythrogaster, L. ornatus, and L. cf. polyacanthus. The morphology of these exotrophic, lotic and neustonic tadpoles is discussed in comparison with other stream-dwelling tadpoles. Based on the assumed biology of these tadpoles, living in interstices of gravel or debris, the functioning of several special morphological features, in particular the funnel-mouth of Leptodactylodon tadpoles, are interpreted.


Assuntos
Anuros/anatomia & histologia , Anuros/classificação , Animais , Anuros/fisiologia , Camarões , Demografia , Ecossistema , Larva/anatomia & histologia , Larva/classificação , Larva/fisiologia , Especificidade da Espécie
16.
Zootaxa ; 3768: 253-90, 2014 Feb 26.
Artigo em Inglês | MEDLINE | ID: mdl-24871178

RESUMO

In 1931, Ernst Ahl described two species of reed frogs inhabiting montane forests of the Albertine Rift in East Africa, Hyperolius alticola and H. discodactylus, which were synonymized two decades later by Raymond Laurent. Since then, this revision has been questioned repeatedly, but taxonomists have been reluctant to make a conclusive decision on the matter, especially since the type material of H. alticola was reported as being lost. Here, we examine the rediscovered type material of H. alticola and reassess the validity of Laurent's synonymy using morphological data from historic and new collections including all available type material, call recordings and molecular data from animals collected on recent expeditions. We find evidence for a northern and southern genetic clade, a divide that is somewhat supported by diverging morphology as well. However, no distinction in advertisement calls could be recovered to support this split and both genetic and morphological differences between geographic units are marginal and not always congruent and thus more likely reflect population-level variation. We therefore conclude that H. alticola is not a valid taxon and should continue to be treated as a synonym of H. discodactylus. Finally, we also report on newly collected material from outside the species known range, with first records of this species from Burundi.


Assuntos
Anuros/anatomia & histologia , Anuros/classificação , Animais , Anuros/genética , República Democrática do Congo , Demografia , Feminino , Masculino , Filogenia
17.
Biol Lett ; 9(3): 20121146, 2013 Jun 23.
Artigo em Inglês | MEDLINE | ID: mdl-23536440

RESUMO

Many amphibian lineages show terrestrialization of their reproductive strategy and breeding is partially or completely independent of water. A number of causal factors have been proposed for the evolution of terrestrialized breeding. While predation has received repeated attention as a potential factor, the influence of other factors such as habitat has never been tested using appropriate data or methods. Using a dataset that comprises 180 amphibian species from various East African habitats, we tested whether species occurring in different habitats show different patterns of terrestrialization in their breeding strategy. We recovered a significant association between terrestrialized breeding strategies and forest habitats. In general, forest seems to act as a facilitator, providing a permissive environment for the evolution of terrestrialized breeding strategies. However, while terrestrial oviposition is strongly correlated with lowland and montane forest habitat, complete terrestrial development is significantly correlated with montane forest only, indicating different selective pressures acting at different steps towards complete terrestrial development.


Assuntos
Anfíbios/fisiologia , Árvores , África Oriental , Anfíbios/classificação , Animais , Ecossistema
18.
PLoS One ; 18(2): e0277535, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-36730334

RESUMO

The spiny-throated reed frog species group is a small radiation of Hyperolius frogs from East Africa. Unlike many members of the genus which have relatively wide distributions, these species tend to be small-range endemics found in montane and submontane forests. Recent discovery of a golden-hued frog with the clade-specific traits of spines on their gular discs prompted a morphological and genetic exploration of the distinctness of this new lineage and relationships to other members of the clade. Genetic (mitochondrial and nuclear loci) results resolved many sister-relationships, but deeper nodes in the phylogeny were poorly resolved. A reduced-representation genome-wide Single Nucleotide Polymorphism (SNP) dataset was able to fully resolve the phylogenetic relationships within this clade, placing this new lineage, here named after the mountain range in which is it found-H. ukaguruensis sp. nov., as an early diverging lineage within the group. This new species is distinct from all other spiny-throated reed frogs, necessitating further understanding as a single-mountain endemics vulnerable to habitat loss and potential decline. Morphometric analyses identify clear morphological characteristics that are distinct for the herein described species, most noticeably in that the eyes are significantly smaller than other members of the genus for which we have samples.


Assuntos
Anuros , Ecossistema , Animais , Tanzânia , Filogenia , Florestas , Bufonidae
19.
Evolution ; 77(9): 1930-1944, 2023 09 01.
Artigo em Inglês | MEDLINE | ID: mdl-37288542

RESUMO

Evolutionary shifts in chromosome compositions (karyotypes) are major drivers of lineage and genomic diversification. Fusion of ancestral chromosomes is one hypothesized mechanism for the evolutionary reduction of the total chromosome number, a frequently implied karyotypic shift. Empirical tests of this hypothesis require model systems with variable karyotypes, known chromosome features, and a robust phylogeny. Here we used chameleons, diverse lizards with exceptionally variable karyotypes ($2n=20\text{-}62$), to test whether chromosomal fusions explain the repeated evolution of karyotypes with fewer chromosomes than ancestral karyotypes. Using a multidisciplinary approach including cytogenetic analyses and phylogenetic comparative methods, we found that a model of constant loss through time best explained chromosome evolution across the chameleon phylogeny. Next, we tested whether fusions of microchromosomes into macrochromosomes explained these evolutionary losses using generalized linear models. Multiple comparisons supported microchromosome fusions as the predominant agent of evolutionary loss. We further compared our results to various natural history traits and found no correlations. As such, we infer that the tendency of microchromosomes to fuse was a quality of the ancestral chameleon genome and that the genomic predisposition of ancestors is a more substantive predictor of chromosome change than the ecological, physiological, and biogeographical factors involved in their diversification.


Assuntos
Evolução Molecular , Genoma , Cariótipo , Cariotipagem , Filogenia
20.
BMC Evol Biol ; 12: 241, 2012 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-23228209

RESUMO

BACKGROUND: Over the last ten years we have seen great efforts focused on revising amphibian systematics. Phylogenetic reconstructions derived from DNA sequence data have played a central role in these revisionary studies but have typically under-sampled the diverse frog family Microhylidae. Here, we present a detailed phylogenetic study focused on expanding previous hypotheses of relationships within this cosmopolitan family. Specifically, we placed an emphasis on assessing relationships among New World genera and those taxa with uncertain phylogenetic affinities (i.e., incertae sedis). RESULTS: One mitochondrial and three nuclear genes (about 2.8 kb) were sequenced to assess phylogenetic relationships. We utilized an unprecedented sampling of 200 microhylid taxa representing 91% of currently recognized subfamilies and 95% of New World genera. Our analyses do not fully resolve relationships among subfamilies supporting previous studies that have suggested a rapid early diversification of this clade. We observed a close relationship between Synapturanus and Otophryne of the subfamily Otophryninae. Within the subfamily Gastrophryninae relationships between genera were well resolved. CONCLUSION: Otophryninae is distantly related to all other New World microhylids that were recovered as a monophyletic group, Gastrophryninae. Within Gastrophryninae, five genera were recovered as non-monophyletic; we propose taxonomic re-arrangements to render all genera monophyletic. This hypothesis of relationships and updated classification for New World microhylids may serve as a guide to better understand the evolutionary history of this group that is apparently subject to convergent morphological evolution and chromosome reduction. Based on a divergence analysis calibrated with hypotheses from previous studies and fossil data, it appears that microhylid genera inhabiting the New World originated during a period of gradual cooling from the late Oligocene to mid Miocene.


Assuntos
Anuros/genética , Evolução Molecular , Variação Genética , Filogenia , Animais , Anuros/anatomia & histologia , Anuros/classificação , Fator Neurotrófico Derivado do Encéfalo/genética , Núcleo Celular/genética , DNA Mitocondrial/química , DNA Mitocondrial/genética , Dados de Sequência Molecular , Monofenol Mono-Oxigenase/genética , RNA Ribossômico 16S/genética , RNA Ribossômico 28S/genética , Análise de Sequência de DNA , Especificidade da Espécie , Fatores de Tempo
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